data_CFZ
# 
_chem_comp.id                                    CFZ 
_chem_comp.name                                  
;2'-deoxy-2'-fluorocytidine 5'-(dihydrogen phosphate)
;
_chem_comp.type                                  "DNA LINKING" 
_chem_comp.pdbx_type                             ATOMN 
_chem_comp.formula                               "C9 H13 F N3 O7 P" 
_chem_comp.mon_nstd_parent_comp_id               DC 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2010-04-13 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        325.188 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     CFZ 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3AGV 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
CFZ P      P      P 0 1 N N N 33.646 15.023 24.064 4.176  1.031  0.067  P      CFZ 1  
CFZ N1     N1     N 0 1 N N N 33.918 9.728  23.714 -2.467 0.031  0.464  N1     CFZ 2  
CFZ C2     C2     C 0 1 N N N 33.873 8.458  23.133 -2.544 0.708  -0.696 C2     CFZ 3  
CFZ O2     O2     O 0 1 N N N 34.456 7.519  23.695 -1.667 0.569  -1.532 O2     CFZ 4  
CFZ N3     N3     N 0 1 N N N 33.199 8.285  21.974 -3.563 1.528  -0.946 N3     CFZ 5  
CFZ C4     C4     C 0 1 N N N 32.595 9.322  21.393 -4.530 1.699  -0.054 C4     CFZ 6  
CFZ N4     N4     N 0 1 N N N 31.932 9.101  20.256 -5.578 2.548  -0.324 N4     CFZ 7  
CFZ C5     C5     C 0 1 N N N 32.641 10.632 21.953 -4.478 1.004  1.171  C5     CFZ 8  
CFZ C6     C6     C 0 1 N N N 33.308 10.788 23.104 -3.439 0.169  1.408  C6     CFZ 9  
CFZ "C1'"  "C1'"  C 0 1 N N R 34.623 9.896  24.995 -1.334 -0.865 0.710  "C1'"  CFZ 10 
CFZ O1P    O1P    O 0 1 N N N 34.400 16.152 24.668 4.620  2.004  1.270  O1P    CFZ 11 
CFZ "C2'"  "C2'"  C 0 1 N N R 36.139 9.933  24.848 -1.311 -2.003 -0.334 "C2'"  CFZ 12 
CFZ "F2'"  "F2'"  F 0 1 N N N 36.798 9.427  25.992 -1.886 -3.164 0.194  "F2'"  CFZ 13 
CFZ O2P    O2P    O 0 1 N N N 33.272 15.065 22.626 3.925  1.834  -1.150 O2P    CFZ 14 
CFZ "C3'"  "C3'"  C 0 1 N N R 36.390 11.427 24.671 0.192  -2.224 -0.616 "C3'"  CFZ 15 
CFZ "O3'"  "O3'"  O 0 1 N N N 37.746 11.809 24.905 0.579  -3.553 -0.259 "O3'"  CFZ 16 
CFZ O3P    O3P    O 0 1 N Y N 32.311 14.855 24.934 5.349  -0.033 -0.224 O3P    CFZ 17 
CFZ "C4'"  "C4'"  C 0 1 N N R 35.439 11.985 25.716 0.900  -1.193 0.291  "C4'"  CFZ 18 
CFZ "O4'"  "O4'"  O 0 1 N N N 34.254 11.152 25.557 -0.086 -0.162 0.517  "O4'"  CFZ 19 
CFZ "C5'"  "C5'"  C 0 1 N N N 35.045 13.434 25.589 2.126  -0.614 -0.417 "C5'"  CFZ 20 
CFZ "O5'"  "O5'"  O 0 1 N N N 34.447 13.674 24.328 2.831  0.248  0.479  "O5'"  CFZ 21 
CFZ HN4    HN4    H 0 1 N N N 31.900 8.180  19.867 -5.612 3.025  -1.168 HN4    CFZ 22 
CFZ HN4A   HN4A   H 0 0 N N N 31.467 9.856  19.793 -6.284 2.671  0.330  HN4A   CFZ 23 
CFZ H5     H5     H 0 1 N N N 32.157 11.467 21.468 -5.258 1.132  1.908  H5     CFZ 24 
CFZ H6     H6     H 0 1 N N N 33.365 11.767 23.557 -3.377 -0.375 2.339  H6     CFZ 25 
CFZ "H1'"  "H1'"  H 0 1 N N N 34.343 9.034  25.618 -1.387 -1.274 1.719  "H1'"  CFZ 26 
CFZ HO1P   HO1P   H 0 0 N N N 34.563 16.814 24.007 5.425  2.509  1.091  HO1P   CFZ 27 
CFZ "H2'"  "H2'"  H 0 1 N N N 36.519 9.310  24.025 -1.831 -1.699 -1.242 "H2'"  CFZ 28 
CFZ "H3'"  "H3'"  H 0 1 N N N 36.222 11.792 23.647 0.417  -2.030 -1.665 "H3'"  CFZ 29 
CFZ "HO3'" "HO3'" H 0 0 N Y N 37.838 12.746 24.780 0.119  -4.243 -0.757 "HO3'" CFZ 30 
CFZ HO3P   HO3P   H 0 0 N Y N 31.558 14.817 24.356 5.566  -0.595 0.533  HO3P   CFZ 31 
CFZ "H4'"  "H4'"  H 0 1 N N N 35.938 11.960 26.696 1.190  -1.654 1.235  "H4'"  CFZ 32 
CFZ "H5'"  "H5'"  H 0 1 N N N 34.326 13.684 26.383 2.782  -1.426 -0.731 "H5'"  CFZ 33 
CFZ "H5'A" "H5'A" H 0 0 N N N 35.942 14.062 25.689 1.807  -0.046 -1.291 "H5'A" CFZ 34 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
CFZ O2P   P      DOUB N N 1  
CFZ P     "O5'"  SING N N 2  
CFZ P     O1P    SING N N 3  
CFZ P     O3P    SING N N 4  
CFZ C6    N1     SING N N 5  
CFZ C2    N1     SING N N 6  
CFZ N1    "C1'"  SING N N 7  
CFZ N3    C2     SING N N 8  
CFZ C2    O2     DOUB N N 9  
CFZ C4    N3     DOUB N N 10 
CFZ N4    C4     SING N N 11 
CFZ C4    C5     SING N N 12 
CFZ N4    HN4    SING N N 13 
CFZ N4    HN4A   SING N N 14 
CFZ C5    C6     DOUB N N 15 
CFZ C5    H5     SING N N 16 
CFZ C6    H6     SING N N 17 
CFZ "C2'" "C1'"  SING N N 18 
CFZ "C1'" "O4'"  SING N N 19 
CFZ "C1'" "H1'"  SING N N 20 
CFZ O1P   HO1P   SING N N 21 
CFZ "C3'" "C2'"  SING N N 22 
CFZ "C2'" "F2'"  SING N N 23 
CFZ "C2'" "H2'"  SING N N 24 
CFZ "C3'" "O3'"  SING N N 25 
CFZ "C3'" "C4'"  SING N N 26 
CFZ "C3'" "H3'"  SING N N 27 
CFZ "O3'" "HO3'" SING N N 28 
CFZ O3P   HO3P   SING N N 29 
CFZ "O4'" "C4'"  SING N N 30 
CFZ "C5'" "C4'"  SING N N 31 
CFZ "C4'" "H4'"  SING N N 32 
CFZ "O5'" "C5'"  SING N N 33 
CFZ "C5'" "H5'"  SING N N 34 
CFZ "C5'" "H5'A" SING N N 35 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
CFZ SMILES           ACDLabs              12.01 "O=P(O)(O)OCC2OC(N1C(=O)N=C(N)C=C1)C(F)C2O"                                                                                                         
CFZ SMILES_CANONICAL CACTVS               3.370 "NC1=NC(=O)N(C=C1)[C@@H]2O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H]2F"                                                                                     
CFZ SMILES           CACTVS               3.370 "NC1=NC(=O)N(C=C1)[CH]2O[CH](CO[P](O)(O)=O)[CH](O)[CH]2F"                                                                                           
CFZ SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "C1=CN(C(=O)N=C1N)[C@H]2[C@@H]([C@@H]([C@H](O2)COP(=O)(O)O)O)F"                                                                                     
CFZ SMILES           "OpenEye OEToolkits" 1.7.0 "C1=CN(C(=O)N=C1N)C2C(C(C(O2)COP(=O)(O)O)O)F"                                                                                                       
CFZ InChI            InChI                1.03  "InChI=1S/C9H13FN3O7P/c10-6-7(14)4(3-19-21(16,17)18)20-8(6)13-2-1-5(11)12-9(13)15/h1-2,4,6-8,14H,3H2,(H2,11,12,15)(H2,16,17,18)/t4-,6-,7-,8-/m1/s1" 
CFZ InChIKey         InChI                1.03  KTAATIGPZHTGOP-XVFCMESISA-N                                                                                                                         
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
CFZ "SYSTEMATIC NAME" ACDLabs              12.01 
;2'-deoxy-2'-fluorocytidine 5'-(dihydrogen phosphate)
;
CFZ "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "[(2R,3R,4R,5R)-5-(4-azanyl-2-oxo-pyrimidin-1-yl)-4-fluoro-3-hydroxy-oxolan-2-yl]methyl dihydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
CFZ "Create component"  2010-04-13 PDBJ 
CFZ "Modify descriptor" 2011-06-04 RCSB 
# 
