data_GFV
#

_chem_comp.id                                   GFV
_chem_comp.name                                 "Hydroxy Pioglitazone (M-IV)"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C19 H20 N2 O4 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "(5S)-5-{[4-(2-{5-[(1S)-1-hydroxyethyl]pyridin-2-yl}ethoxy)phenyl]methyl}-1,3-thiazolidine-2,4-dione"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2018-05-21
_chem_comp.pdbx_modified_date                   2021-03-13
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       372.438
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    GFV
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6DHA
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
GFV  C10  C1   C  0  1  N  N  N  16.454  61.763  11.539   2.059  -1.148  -0.261  C10  GFV   1  
GFV  C13  C2   C  0  1  Y  N  N  19.177  61.545  13.945  -1.452  -2.051  -0.787  C13  GFV   2  
GFV  C15  C3   C  0  1  Y  N  N  18.246  61.767  16.134  -2.693  -0.014  -1.000  C15  GFV   3  
GFV  C17  C4   C  0  1  Y  N  N  16.801  61.842  14.219  -0.326   0.065  -0.644  C17  GFV   4  
GFV  C20  C5   C  0  1  N  N  N  18.462  63.348  19.672  -5.929   1.774  -0.027  C20  GFV   5  
GFV  C01  C6   C  0  1  N  N  N  18.337  68.233   9.644   7.519   2.609   1.154  C01  GFV   6  
GFV  C02  C7   C  0  1  N  N  S  18.519  67.255   8.499   7.925   1.275   0.523  C02  GFV   7  
GFV  C03  C8   C  0  1  Y  N  N  18.043  65.819   8.855   6.714   0.387   0.403  C03  GFV   8  
GFV  C04  C9   C  0  1  Y  N  N  16.727  65.626   9.444   5.874   0.492  -0.689  C04  GFV   9  
GFV  C06  C10  C  0  1  Y  N  N  17.072  63.325   9.533   4.510  -1.181   0.116  C06  GFV  10  
GFV  C07  C11  C  0  1  Y  N  N  18.367  63.429   8.965   5.306  -1.347   1.233  C07  GFV  11  
GFV  C08  C12  C  0  1  Y  N  N  18.854  64.725   8.619   6.431  -0.551   1.385  C08  GFV  12  
GFV  C09  C13  C  0  1  N  N  N  16.524  61.948   9.910   3.285  -2.041  -0.060  C09  GFV  13  
GFV  C12  C14  C  0  1  Y  N  N  17.895  61.669  13.401  -0.285  -1.321  -0.618  C12  GFV  14  
GFV  C14  C15  C  0  1  Y  N  N  19.345  61.592  15.308  -2.653  -1.396  -0.981  C14  GFV  15  
GFV  C16  C16  C  0  1  Y  N  N  16.969  61.893  15.591  -1.531   0.716  -0.826  C16  GFV  16  
GFV  C18  C17  C  0  1  N  N  N  18.445  61.828  17.685  -4.004   0.698  -1.211  C18  GFV  17  
GFV  C19  C18  C  0  1  N  N  S  18.525  63.269  18.110  -4.670   0.952   0.142  C19  GFV  18  
GFV  C23  C19  C  0  1  N  N  N  20.544  64.709  19.030  -6.984  -0.085   0.864  C23  GFV  19  
GFV  N05  N1   N  0  1  Y  N  N  16.308  64.412   9.751   4.813  -0.282  -0.801  N05  GFV  20  
GFV  N22  N2   N  0  1  N  N  N  19.723  64.247  20.214  -7.028   1.154   0.370  N22  GFV  21  
GFV  O11  O1   O  0  1  N  N  N  17.734  61.615  11.967   0.898  -1.963  -0.428  O11  GFV  22  
GFV  O21  O2   O  0  1  N  N  N  17.634  62.842  20.354  -5.930   2.898  -0.481  O21  GFV  23  
GFV  O24  O3   O  0  1  N  N  N  21.403  65.449  19.057  -7.934  -0.736   1.254  O24  GFV  24  
GFV  O26  O4   O  0  1  N  N  N  17.711  67.716   7.404   8.474   1.510  -0.775  O26  GFV  25  
GFV  S25  S1   S  0  1  N  N  N  19.939  63.924  17.653  -5.290  -0.607   0.860  S25  GFV  26  
GFV  H1   H1   H  0  1  N  N  N  15.999  62.651  12.003   1.931  -0.506   0.611  H1   GFV  27  
GFV  H2   H2   H  0  1  N  N  N  15.863  60.872  11.795   2.201  -0.531  -1.149  H2   GFV  28  
GFV  H3   H3   H  0  1  N  N  N  20.031  61.413  13.297  -1.422  -3.131  -0.772  H3   GFV  29  
GFV  H4   H4   H  0  1  N  N  N  15.814  61.938  13.790   0.581   0.636  -0.508  H4   GFV  30  
GFV  H5   H5   H  0  1  N  N  N  18.944  67.910  10.503   7.100   2.430   2.144  H5   GFV  31  
GFV  H6   H6   H  0  1  N  N  N  18.658  69.235   9.325   8.395   3.252   1.240  H6   GFV  32  
GFV  H7   H7   H  0  1  N  N  N  17.277  68.263   9.935   6.772   3.095   0.526  H7   GFV  33  
GFV  H8   H8   H  0  1  N  N  N  19.580  67.220   8.211   8.672   0.789   1.151  H8   GFV  34  
GFV  H9   H9   H  0  1  N  N  N  16.091  66.478   9.631   6.089   1.217  -1.460  H9   GFV  35  
GFV  H10  H10  H  0  1  N  N  N  18.970  62.549   8.798   5.053  -2.085   1.980  H10  GFV  36  
GFV  H11  H11  H  0  1  N  N  N  19.834  64.848   8.183   7.072  -0.658   2.248  H11  GFV  37  
GFV  H12  H12  H  0  1  N  N  N  15.512  61.838   9.493   3.144  -2.658   0.827  H12  GFV  38  
GFV  H13  H13  H  0  1  N  N  N  17.181  61.173   9.489   3.414  -2.683  -0.932  H13  GFV  39  
GFV  H14  H14  H  0  1  N  N  N  20.332  61.493  15.735  -3.562  -1.964  -1.117  H14  GFV  40  
GFV  H15  H15  H  0  1  N  N  N  16.115  62.030  16.238  -1.566   1.795  -0.833  H15  GFV  41  
GFV  H16  H16  H  0  1  N  N  N  17.595  61.342  18.186  -3.824   1.649  -1.712  H16  GFV  42  
GFV  H17  H17  H  0  1  N  N  N  19.376  61.310  17.958  -4.657   0.080  -1.828  H17  GFV  43  
GFV  H18  H18  H  0  1  N  N  N  17.700  63.850  17.672  -3.977   1.445   0.825  H18  GFV  44  
GFV  H19  H19  H  0  1  N  N  N  19.918  64.456  21.172  -7.882   1.609   0.301  H19  GFV  45  
GFV  H20  H20  H  0  1  N  N  N  17.978  68.595   7.161   9.258   2.076  -0.774  H20  GFV  46  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
GFV  O26  C02  SING  N  N   1  
GFV  C02  C03  SING  N  N   2  
GFV  C02  C01  SING  N  N   3  
GFV  C08  C03  DOUB  Y  N   4  
GFV  C08  C07  SING  Y  N   5  
GFV  C03  C04  SING  Y  N   6  
GFV  C07  C06  DOUB  Y  N   7  
GFV  C04  N05  DOUB  Y  N   8  
GFV  C06  N05  SING  Y  N   9  
GFV  C06  C09  SING  N  N  10  
GFV  C09  C10  SING  N  N  11  
GFV  C10  O11  SING  N  N  12  
GFV  O11  C12  SING  N  N  13  
GFV  C12  C13  DOUB  Y  N  14  
GFV  C12  C17  SING  Y  N  15  
GFV  C13  C14  SING  Y  N  16  
GFV  C17  C16  DOUB  Y  N  17  
GFV  C14  C15  DOUB  Y  N  18  
GFV  C16  C15  SING  Y  N  19  
GFV  C15  C18  SING  N  N  20  
GFV  S25  C19  SING  N  N  21  
GFV  S25  C23  SING  N  N  22  
GFV  C18  C19  SING  N  N  23  
GFV  C19  C20  SING  N  N  24  
GFV  C23  O24  DOUB  N  N  25  
GFV  C23  N22  SING  N  N  26  
GFV  C20  N22  SING  N  N  27  
GFV  C20  O21  DOUB  N  N  28  
GFV  C10  H1   SING  N  N  29  
GFV  C10  H2   SING  N  N  30  
GFV  C13  H3   SING  N  N  31  
GFV  C17  H4   SING  N  N  32  
GFV  C01  H5   SING  N  N  33  
GFV  C01  H6   SING  N  N  34  
GFV  C01  H7   SING  N  N  35  
GFV  C02  H8   SING  N  N  36  
GFV  C04  H9   SING  N  N  37  
GFV  C07  H10  SING  N  N  38  
GFV  C08  H11  SING  N  N  39  
GFV  C09  H12  SING  N  N  40  
GFV  C09  H13  SING  N  N  41  
GFV  C14  H14  SING  N  N  42  
GFV  C16  H15  SING  N  N  43  
GFV  C18  H16  SING  N  N  44  
GFV  C18  H17  SING  N  N  45  
GFV  C19  H18  SING  N  N  46  
GFV  N22  H19  SING  N  N  47  
GFV  O26  H20  SING  N  N  48  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
GFV  SMILES            ACDLabs               12.01  "C(Oc2ccc(CC1C(NC(=O)S1)=O)cc2)Cc3ncc(C(C)O)cc3"  
GFV  InChI             InChI                 1.03   "InChI=1S/C19H20N2O4S/c1-12(22)14-4-5-15(20-11-14)8-9-25-16-6-2-13(3-7-16)10-17-18(23)21-19(24)26-17/h2-7,11-12,17,22H,8-10H2,1H3,(H,21,23,24)/t12-,17-/m0/s1"  
GFV  InChIKey          InChI                 1.03   OXVFDZYQLGRLCD-SJCJKPOMSA-N  
GFV  SMILES_CANONICAL  CACTVS                3.385  "C[C@H](O)c1ccc(CCOc2ccc(C[C@@H]3SC(=O)NC3=O)cc2)nc1"  
GFV  SMILES            CACTVS                3.385  "C[CH](O)c1ccc(CCOc2ccc(C[CH]3SC(=O)NC3=O)cc2)nc1"  
GFV  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "C[C@@H](c1ccc(nc1)CCOc2ccc(cc2)C[C@H]3C(=O)NC(=O)S3)O"  
GFV  SMILES            "OpenEye OEToolkits"  2.0.6  "CC(c1ccc(nc1)CCOc2ccc(cc2)CC3C(=O)NC(=O)S3)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
GFV  "SYSTEMATIC NAME"  ACDLabs               12.01  "(5S)-5-{[4-(2-{5-[(1S)-1-hydroxyethyl]pyridin-2-yl}ethoxy)phenyl]methyl}-1,3-thiazolidine-2,4-dione"  
GFV  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.6  "(5~{S})-5-[[4-[2-[5-[(1~{S})-1-oxidanylethyl]pyridin-2-yl]ethoxy]phenyl]methyl]-1,3-thiazolidine-2,4-dione"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
GFV  "Create component"  2018-05-21  RCSB  
GFV  "Modify name"       2018-05-23  RCSB  
GFV  "Initial release"   2019-03-13  RCSB  
GFV  "Modify synonyms"   2021-03-13  RCSB  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     GFV
_pdbx_chem_comp_synonyms.name        "(5S)-5-{[4-(2-{5-[(1S)-1-hydroxyethyl]pyridin-2-yl}ethoxy)phenyl]methyl}-1,3-thiazolidine-2,4-dione"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
##
