data_VLU
# 
_chem_comp.id                                    VLU 
_chem_comp.name                                  "(1R,2S)-2-{[N-({2-[(3-chlorophenyl)sulfanyl]-2-methylpropoxy}carbonyl)-L-leucyl]amino}-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C24 H36 Cl N3 O8 S2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-08-30 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        594.141 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     VLU 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8E61 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
VLU C02  C1  C  0 1 N N N N N N -21.439 -3.782 1.859  -0.767  -0.312 -0.360 C02  VLU 1  
VLU C04  C2  C  0 1 N N S N N N -20.946 -5.444 3.630  1.660   -0.092 -0.337 C04  VLU 2  
VLU C05  C3  C  0 1 N N N N N N -21.653 -6.697 4.143  1.985   0.734  -1.583 C05  VLU 3  
VLU C06  C4  C  0 1 N N N N N N -23.175 -6.559 4.183  1.018   0.363  -2.709 C06  VLU 4  
VLU C07  C5  C  0 1 N N N N N N -23.829 -7.645 5.035  1.262   1.275  -3.913 C07  VLU 5  
VLU C08  C6  C  0 1 N N N N N N -23.623 -5.174 4.655  1.246   -1.094 -3.118 C08  VLU 6  
VLU C09  C7  C  0 1 N N N N N N -19.443 -5.670 3.600  2.687   0.183  0.730  C09  VLU 7  
VLU C11  C8  C  0 1 N N S N N N -17.273 -5.516 4.869  4.987   0.189  1.535  C11  VLU 8  
VLU C12  C9  C  0 1 N N N N N N -16.557 -4.161 4.934  6.203   -0.714 1.318  C12  VLU 9  
VLU C13  C10 C  0 1 N N S N N N -16.615 -3.408 3.577  5.795   -2.175 1.515  C13  VLU 10 
VLU C14  C11 C  0 1 N N N N N N -15.925 -2.133 3.692  4.831   -2.607 0.432  C14  VLU 11 
VLU C16  C12 C  0 1 N N N N N N -15.010 -3.201 1.739  6.896   -3.491 -0.161 C16  VLU 12 
VLU C17  C13 C  0 1 N N N N N N -15.874 -4.215 2.511  7.015   -3.107 1.331  C17  VLU 13 
VLU C19  C14 C  0 1 N N R N N N -17.036 -6.368 6.129  5.420   1.655  1.461  C19  VLU 14 
VLU C23  C15 C  0 1 N N N N N N -22.702 -2.133 0.732  -3.125  -0.651 -0.505 C23  VLU 15 
VLU C24  C16 C  0 1 N N N N N N -24.173 -2.075 0.295  -4.417  -0.147 0.141  C24  VLU 16 
VLU C25  C17 C  0 1 N N N N N N -25.070 -2.295 1.515  -4.387  -0.444 1.641  C25  VLU 17 
VLU C26  C18 C  0 1 N N N N N N -24.491 -3.153 -0.739 -4.542  1.362  -0.078 C26  VLU 18 
VLU C28  C19 C  0 1 Y N N N N N -23.547 -0.262 -1.960 -7.215  -0.200 0.152  C28  VLU 19 
VLU C29  C20 C  0 1 Y N N N N N -24.161 -0.465 -3.191 -7.012  0.729  1.166  C29  VLU 20 
VLU C30  C21 C  0 1 Y N N N N N -23.424 -0.342 -4.358 -8.094  1.348  1.760  C30  VLU 21 
VLU C31  C22 C  0 1 Y N N N N N -22.077 -0.017 -4.294 -9.379  1.044  1.349  C31  VLU 22 
VLU C32  C23 C  0 1 Y N N N N N -21.465 0.185  -3.061 -9.586  0.119  0.340  C32  VLU 23 
VLU C34  C24 C  0 1 Y N N N N N -22.203 0.064  -1.897 -8.508  -0.504 -0.259 C34  VLU 24 
VLU N03  N1  N  0 1 N N N N N N -21.418 -5.152 2.297  0.331   0.275  0.158  N03  VLU 25 
VLU N10  N2  N  0 1 N N N N N N -18.697 -5.316 4.791  3.988   -0.079 0.497  N10  VLU 26 
VLU N15  N3  N  0 1 N N N N N N -14.935 -2.016 2.555  5.472   -3.346 -0.489 N15  VLU 27 
VLU O01  O1  O  0 1 N N N N N N -20.797 -2.974 2.452  -0.654  -1.145 -1.237 O01  VLU 28 
VLU O18  O2  O  0 1 N N N N N N -16.088 -1.325 4.550  3.652   -2.327 0.400  O18  VLU 29 
VLU O20  O3  O  0 1 N N N N N N -17.761 -7.536 5.919  4.310   2.496  1.778  O20  VLU 30 
VLU O21  O4  O  0 1 N N N N N N -18.903 -6.119 2.647  2.343   0.641  1.800  O21  VLU 31 
VLU O22  O5  O  0 1 N N N N N N -22.223 -3.447 0.748  -1.988  0.021  0.099  O22  VLU 32 
VLU S27  S1  S  0 1 N N N N N N -24.510 -0.426 -0.430 -5.837  -0.987 -0.614 S27  VLU 33 
VLU CL33 CL1 CL 0 0 N N N N N N -19.732 0.605  -2.961 -11.201 -0.259 -0.172 CL33 VLU 34 
VLU S2   S2  S  0 1 N Y N N N N -17.783 -5.560 7.554  6.002   2.029  -0.216 S2   VLU 35 
VLU H1   H1  H  0 1 N N N N N N -21.171 -4.604 4.304  1.674   -1.152 -0.590 H1   VLU 36 
VLU H2   H2  H  0 1 N N N N N N -21.396 -7.538 3.482  1.885   1.795  -1.353 H2   VLU 37 
VLU H3   H3  H  0 1 N N N N N N -21.295 -6.908 5.161  3.008   0.527  -1.900 H3   VLU 38 
VLU H4   H4  H  0 1 N N N N N N -23.541 -6.687 3.154  -0.008  0.486  -2.361 H4   VLU 39 
VLU H5   H5  H  0 1 N N N N N N -24.920 -7.505 5.034  2.287   1.151  -4.260 H5   VLU 40 
VLU H7   H7  H  0 1 N N N N N N -23.586 -8.634 4.619  0.572   1.010  -4.714 H7   VLU 41 
VLU H8   H8  H  0 1 N N N N N N -24.722 -5.127 4.666  1.072   -1.743 -2.260 H8   VLU 42 
VLU H9   H9  H  0 1 N N N N N N -23.238 -4.990 5.669  0.557   -1.358 -3.919 H9   VLU 43 
VLU H10  H10 H  0 1 N N N N N N -23.230 -4.408 3.970  2.272   -1.217 -3.465 H10  VLU 44 
VLU H11  H11 H  0 1 N N N N N N -16.915 -6.070 3.989  4.555   -0.013 2.515  H11  VLU 45 
VLU H12  H12 H  0 1 N N N N N N -15.504 -4.328 5.203  6.581   -0.576 0.305  H12  VLU 46 
VLU H13  H13 H  0 1 N N N N N N -17.038 -3.541 5.705  6.982   -0.454 2.035  H13  VLU 47 
VLU H14  H14 H  0 1 N N N N N N -17.664 -3.264 3.278  5.350   -2.316 2.500  H14  VLU 48 
VLU H15  H15 H  0 1 N N N N N N -14.003 -3.611 1.572  7.495   -2.817 -0.773 H15  VLU 49 
VLU H16  H16 H  0 1 N N N N N N -15.476 -2.966 0.771  7.214   -4.523 -0.311 H16  VLU 50 
VLU H17  H17 H  0 1 N N N N N N -16.590 -4.702 1.833  7.946   -2.573 1.523  H17  VLU 51 
VLU H18  H18 H  0 1 N N N N N N -15.238 -4.979 2.983  6.933   -3.987 1.968  H18  VLU 52 
VLU H19  H19 H  0 1 N N N N N N -15.966 -6.522 6.330  6.226   1.832  2.173  H19  VLU 53 
VLU H20  H20 H  0 1 N N N N N N -22.097 -1.541 0.030  -3.036  -1.727 -0.349 H20  VLU 54 
VLU H21  H21 H  0 1 N N N N N N -22.612 -1.708 1.742  -3.146  -0.440 -1.574 H21  VLU 55 
VLU H22  H22 H  0 1 N N N N N N -24.855 -1.527 2.272  -3.752  0.285  2.143  H22  VLU 56 
VLU H23  H23 H  0 1 N N N N N N -26.125 -2.226 1.212  -5.398  -0.383 2.044  H23  VLU 57 
VLU H24  H24 H  0 1 N N N N N N -24.875 -3.291 1.938  -3.990  -1.446 1.806  H24  VLU 58 
VLU H25  H25 H  0 1 N N N N N N -24.290 -4.145 -0.309 -4.353  1.594  -1.127 H25  VLU 59 
VLU H26  H26 H  0 1 N N N N N N -25.551 -3.085 -1.025 -5.547  1.686  0.190  H26  VLU 60 
VLU H27  H27 H  0 1 N N N N N N -23.861 -3.005 -1.628 -3.813  1.881  0.545  H27  VLU 61 
VLU H28  H28 H  0 1 N N N N N N -25.210 -0.718 -3.237 -6.009  0.966  1.488  H28  VLU 62 
VLU H29  H29 H  0 1 N N N N N N -23.898 -0.499 -5.316 -7.937  2.070  2.548  H29  VLU 63 
VLU H30  H30 H  0 1 N N N N N N -21.502 0.079  -5.203 -10.223 1.530  1.816  H30  VLU 64 
VLU H31  H31 H  0 1 N N N N N N -21.731 0.224  -0.939 -8.669  -1.222 -1.049 H31  VLU 65 
VLU H32  H32 H  0 1 N N N N N N -21.724 -5.887 1.691  0.240   0.939  0.858  H32  VLU 66 
VLU H33  H33 H  0 1 N N N N N N -19.181 -4.925 5.574  4.264   -0.444 -0.358 H33  VLU 67 
VLU H34  H34 H  0 1 N N N N N N -14.325 -1.240 2.395  5.049   -3.734 -1.271 H34  VLU 68 
VLU H35  H35 H  0 1 N N N N N N -17.657 -8.112 6.667  3.554   2.391  1.184  H35  VLU 69 
VLU O1   O6  O  0 1 N Y N N N N -17.108 -6.550 8.905  7.219   1.346  -0.486 O1   VLU 70 
VLU O2   O7  O  0 1 N Y N N N N ?       ?      ?      4.921   1.992  -1.139 O2   VLU 71 
VLU O3   O8  O  0 1 N Y N N N N ?       ?      ?      6.399   3.497  -0.162 O3   VLU 72 
VLU H6   H6  H  0 1 N N N N N N -23.452 -7.579 6.066  1.099   2.312  -3.621 H6   VLU 73 
VLU H36  H36 H  0 1 N Y N N N N ?       ?      ?      6.734   3.845  -0.999 H36  VLU 74 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
VLU C30 C31  DOUB Y N 1  
VLU C30 C29  SING Y N 2  
VLU C31 C32  SING Y N 3  
VLU C29 C28  DOUB Y N 4  
VLU C32 CL33 SING N N 5  
VLU C32 C34  DOUB Y N 6  
VLU C28 C34  SING Y N 7  
VLU C28 S27  SING N N 8  
VLU C26 C24  SING N N 9  
VLU S27 C24  SING N N 10 
VLU C24 C23  SING N N 11 
VLU C24 C25  SING N N 12 
VLU C23 O22  SING N N 13 
VLU O22 C02  SING N N 14 
VLU C16 C17  SING N N 15 
VLU C16 N15  SING N N 16 
VLU C02 N03  SING N N 17 
VLU C02 O01  DOUB N N 18 
VLU N03 C04  SING N N 19 
VLU C17 C13  SING N N 20 
VLU N15 C14  SING N N 21 
VLU O21 C09  DOUB N N 22 
VLU C13 C14  SING N N 23 
VLU C13 C12  SING N N 24 
VLU C09 C04  SING N N 25 
VLU C09 N10  SING N N 26 
VLU C04 C05  SING N N 27 
VLU C14 O18  DOUB N N 28 
VLU C05 C06  SING N N 29 
VLU C06 C08  SING N N 30 
VLU C06 C07  SING N N 31 
VLU N10 C11  SING N N 32 
VLU C11 C12  SING N N 33 
VLU C11 C19  SING N N 34 
VLU O20 C19  SING N N 35 
VLU C19 S2   SING N N 36 
VLU C04 H1   SING N N 37 
VLU C05 H2   SING N N 38 
VLU C05 H3   SING N N 39 
VLU C06 H4   SING N N 40 
VLU C07 H5   SING N N 41 
VLU C07 H7   SING N N 42 
VLU C08 H8   SING N N 43 
VLU C08 H9   SING N N 44 
VLU C08 H10  SING N N 45 
VLU C11 H11  SING N N 46 
VLU C12 H12  SING N N 47 
VLU C12 H13  SING N N 48 
VLU C13 H14  SING N N 49 
VLU C16 H15  SING N N 50 
VLU C16 H16  SING N N 51 
VLU C17 H17  SING N N 52 
VLU C17 H18  SING N N 53 
VLU C19 H19  SING N N 54 
VLU C23 H20  SING N N 55 
VLU C23 H21  SING N N 56 
VLU C25 H22  SING N N 57 
VLU C25 H23  SING N N 58 
VLU C25 H24  SING N N 59 
VLU C26 H25  SING N N 60 
VLU C26 H26  SING N N 61 
VLU C26 H27  SING N N 62 
VLU C29 H28  SING N N 63 
VLU C30 H29  SING N N 64 
VLU C31 H30  SING N N 65 
VLU C34 H31  SING N N 66 
VLU N03 H32  SING N N 67 
VLU N10 H33  SING N N 68 
VLU N15 H34  SING N N 69 
VLU O20 H35  SING N N 70 
VLU S2  O1   DOUB N N 71 
VLU S2  O2   DOUB N N 72 
VLU S2  O3   SING N N 73 
VLU C07 H6   SING N N 74 
VLU O3  H36  SING N N 75 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
VLU SMILES           ACDLabs              12.01 "CC(C)CC(NC(=O)OCC(C)(C)Sc1cccc(Cl)c1)C(=O)NC(CC1CCNC1=O)C(O)S(=O)(=O)O"                                                                                                                                                                            
VLU InChI            InChI                1.06  "InChI=1S/C24H36ClN3O8S2/c1-14(2)10-18(28-23(32)36-13-24(3,4)37-17-7-5-6-16(25)12-17)21(30)27-19(22(31)38(33,34)35)11-15-8-9-26-20(15)29/h5-7,12,14-15,18-19,22,31H,8-11,13H2,1-4H3,(H,26,29)(H,27,30)(H,28,32)(H,33,34,35)/t15-,18-,19-,22+/m0/s1" 
VLU InChIKey         InChI                1.06  MOYGJNHMYWCTOO-SXTKRDDTSA-N                                                                                                                                                                                                                         
VLU SMILES_CANONICAL CACTVS               3.385 "CC(C)C[C@H](NC(=O)OCC(C)(C)Sc1cccc(Cl)c1)C(=O)N[C@@H](C[C@@H]2CCNC2=O)[C@H](O)[S](O)(=O)=O"                                                                                                                                                        
VLU SMILES           CACTVS               3.385 "CC(C)C[CH](NC(=O)OCC(C)(C)Sc1cccc(Cl)c1)C(=O)N[CH](C[CH]2CCNC2=O)[CH](O)[S](O)(=O)=O"                                                                                                                                                              
VLU SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)C[C@@H](C(=O)N[C@@H](C[C@@H]1CCNC1=O)[C@H](O)S(=O)(=O)O)NC(=O)OCC(C)(C)Sc2cccc(c2)Cl"                                                                                                                                                         
VLU SMILES           "OpenEye OEToolkits" 2.0.7 "CC(C)CC(C(=O)NC(CC1CCNC1=O)C(O)S(=O)(=O)O)NC(=O)OCC(C)(C)Sc2cccc(c2)Cl"                                                                                                                                                                            
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
VLU "SYSTEMATIC NAME" ACDLabs              12.01 "(1R,2S)-2-{[N-({2-[(3-chlorophenyl)sulfanyl]-2-methylpropoxy}carbonyl)-L-leucyl]amino}-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid"                                           
VLU "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(1~{R},2~{S})-2-[[(2~{S})-2-[[2-(3-chlorophenyl)sulfanyl-2-methyl-propoxy]carbonylamino]-4-methyl-pentanoyl]amino]-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propane-1-sulfonic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
VLU "Create component" 2022-08-30 RCSB 
VLU "Initial release"  2022-09-07 RCSB 
VLU "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            VLU 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C19 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
