data_NUT
#

_chem_comp.id                                   NUT
_chem_comp.name                                 "4-({(4S,5R)-4,5-bis(4-chlorophenyl)-2-[4-methoxy-2-(propan-2-yloxy)phenyl]-4,5-dihydro-1H-imidazol-1-yl}carbonyl)piperazin-2-one"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C30 H30 Cl2 N4 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "Nutlin 3a"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2012-10-12
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       581.490
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    NUT
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       4HG7
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
NUT  O3   O3   O   0  1  N  N  N  -23.667   5.839  -16.568   2.397  -0.980  -0.849  O3   NUT   1  
NUT  C25  C25  C   0  1  N  N  N  -23.015   6.538  -15.757   1.311  -1.194  -0.347  C25  NUT   2  
NUT  N2   N2   N   0  1  N  N  N  -21.695   6.402  -15.710   0.673  -2.356  -0.591  N2   NUT   3  
NUT  C29  C29  C   0  1  N  N  N  -21.006   5.564  -16.697  -0.534  -2.739   0.158  C29  NUT   4  
NUT  C28  C28  C   0  1  N  N  N  -19.624   6.037  -17.066  -0.440  -4.196   0.520  C28  NUT   5  
NUT  O2   O2   O   0  1  N  N  N  -19.027   5.438  -17.957  -1.221  -4.641   1.334  O2   NUT   6  
NUT  N3   N3   N   0  1  N  N  N  -19.096   7.088  -16.423   0.461  -5.021  -0.014  N3   NUT   7  
NUT  C27  C27  C   0  1  N  N  N  -19.765   7.777  -15.316   1.515  -4.612  -0.933  C27  NUT   8  
NUT  C26  C26  C   0  1  N  N  N  -20.851   6.955  -14.647   1.151  -3.291  -1.624  C26  NUT   9  
NUT  N1   N1   N   0  1  N  N  N  -23.728   7.387  -14.970   0.748  -0.273   0.460  N1   NUT  10  
NUT  C10  C10  C   0  1  N  N  N  -25.032   7.173  -14.710   1.231   0.995   0.697  C10  NUT  11  
NUT  C9   C9   C   0  1  Y  N  N  -25.716   5.849  -14.559   2.465   1.515   0.075  C9   NUT  12  
NUT  C3   C3   C   0  1  Y  N  N  -27.003   5.643  -15.033   2.420   2.663  -0.719  C3   NUT  13  
NUT  C2   C2   C   0  1  Y  N  N  -27.636   4.390  -14.872   3.572   3.145  -1.298  C2   NUT  14  
NUT  C5   C5   C   0  1  Y  N  N  -25.021   4.742  -13.878   3.687   0.861   0.282  C5   NUT  15  
NUT  O1   O1   O   0  1  N  N  N  -23.751   4.950  -13.415   3.740  -0.253   1.056  O1   NUT  16  
NUT  C6   C6   C   0  1  N  N  N  -23.077   3.927  -12.640   4.992  -0.939   1.122  C6   NUT  17  
NUT  C8   C8   C   0  1  N  N  N  -22.445   2.900  -13.586   5.780  -0.445   2.336  C8   NUT  18  
NUT  C7   C7   C   0  1  N  N  N  -22.063   4.596  -11.718   4.743  -2.443   1.252  C7   NUT  19  
NUT  C4   C4   C   0  1  Y  N  N  -25.678   3.512  -13.732   4.840   1.354  -0.304  C4   NUT  20  
NUT  C1   C1   C   0  1  Y  N  N  -26.973   3.348  -14.207   4.784   2.492  -1.095  C1   NUT  21  
NUT  O    O    O   0  1  N  N  N  -27.557   2.127  -14.022   5.916   2.973  -1.669  O    NUT  22  
NUT  C    C    C   0  1  N  N  N  -28.863   1.822  -14.540   5.788   4.152  -2.466  C    NUT  23  
NUT  C18  C18  C   0  1  N  N  R  -23.330   8.774  -14.740  -0.493  -0.446   1.234  C18  NUT  24  
NUT  C19  C19  C   0  1  Y  N  N  -22.897   9.233  -13.374  -1.661  -0.697   0.316  C19  NUT  25  
NUT  C24  C24  C   0  1  Y  N  N  -22.198  10.451  -13.326  -2.639  -1.606   0.675  C24  NUT  26  
NUT  C23  C23  C   0  1  Y  N  N  -21.867  10.994  -12.087  -3.711  -1.837  -0.166  C23  NUT  27  
NUT  C22  C22  C   0  1  Y  N  N  -22.260  10.321  -10.942  -3.805  -1.159  -1.368  C22  NUT  28  
NUT  CL1  CL1  CL  0  0  N  N  N  -21.928  11.079   -9.376  -5.151  -1.448  -2.426  CL1  NUT  29  
NUT  C21  C21  C   0  1  Y  N  N  -22.988   9.123  -10.942  -2.825  -0.250  -1.728  C21  NUT  30  
NUT  C20  C20  C   0  1  Y  N  N  -23.300   8.579  -12.190  -1.757  -0.016  -0.883  C20  NUT  31  
NUT  C11  C11  C   0  1  N  N  S  -24.792   9.367  -15.038  -0.651   0.905   1.958  C11  NUT  32  
NUT  N    N    N   0  1  N  N  N  -25.707   8.251  -14.709   0.508   1.691   1.512  N    NUT  33  
NUT  C12  C12  C   0  1  Y  N  N  -25.194  10.617  -14.301  -1.933   1.580   1.540  C12  NUT  34  
NUT  C17  C17  C   0  1  Y  N  N  -24.980  11.874  -14.865  -1.994   2.264   0.340  C17  NUT  35  
NUT  C16  C16  C   0  1  Y  N  N  -25.355  13.035  -14.145  -3.169   2.883  -0.043  C16  NUT  36  
NUT  C15  C15  C   0  1  Y  N  N  -25.935  12.921  -12.864  -4.283   2.818   0.774  C15  NUT  37  
NUT  CL   CL   CL  0  0  N  N  N  -26.417  14.360  -11.915  -5.759   3.595   0.293  CL   NUT  38  
NUT  C14  C14  C   0  1  Y  N  N  -26.156  11.677  -12.254  -4.221   2.134   1.975  C14  NUT  39  
NUT  C13  C13  C   0  1  Y  N  N  -25.791  10.528  -13.019  -3.047   1.511   2.355  C13  NUT  40  
NUT  H1   H1   H   0  1  N  N  N  -21.616   5.540  -17.612  -0.604  -2.141   1.066  H1   NUT  41  
NUT  H2   H2   H   0  1  N  N  N  -20.922   4.547  -16.285  -1.416  -2.569  -0.460  H2   NUT  42  
NUT  H3   H3   H   0  1  N  N  N  -18.198   7.419  -16.714   0.411  -5.960   0.226  H3   NUT  43  
NUT  H4   H4   H   0  1  N  N  N  -19.009   8.033  -14.559   2.445  -4.485  -0.379  H4   NUT  44  
NUT  H5   H5   H   0  1  N  N  N  -20.220   8.699  -15.706   1.651  -5.385  -1.689  H5   NUT  45  
NUT  H6   H6   H   0  1  N  N  N  -21.452   7.594  -13.983   0.364  -3.462  -2.358  H6   NUT  46  
NUT  H7   H7   H   0  1  N  N  N  -20.400   6.140  -14.062   2.031  -2.876  -2.116  H7   NUT  47  
NUT  H9   H9   H   0  1  N  N  N  -27.526   6.447  -15.529   1.481   3.173  -0.879  H9   NUT  48  
NUT  H10  H10  H   0  1  N  N  N  -28.631   4.234  -15.261   3.536   4.033  -1.911  H10  NUT  49  
NUT  H11  H11  H   0  1  N  N  N  -23.816   3.404  -12.014   5.562  -0.742   0.214  H11  NUT  50  
NUT  H12  H12  H   0  1  N  N  N  -21.934   2.124  -12.997   5.210  -0.642   3.244  H12  NUT  51  
NUT  H13  H13  H   0  1  N  N  N  -23.230   2.436  -14.201   6.736  -0.968   2.386  H13  NUT  52  
NUT  H14  H14  H   0  1  N  N  N  -21.717   3.403  -14.240   5.957   0.627   2.243  H14  NUT  53  
NUT  H15  H15  H   0  1  N  N  N  -22.578   5.318  -11.068   4.181  -2.795   0.387  H15  NUT  54  
NUT  H16  H16  H   0  1  N  N  N  -21.571   3.832  -11.099   5.699  -2.966   1.302  H16  NUT  55  
NUT  H17  H17  H   0  1  N  N  N  -21.308   5.120  -12.322   4.173  -2.640   2.160  H17  NUT  56  
NUT  H18  H18  H   0  1  N  N  N  -25.175   2.688  -13.248   5.783   0.853  -0.146  H18  NUT  57  
NUT  H19  H19  H   0  1  N  N  N  -29.132   0.789  -14.274   5.402   4.966  -1.853  H19  NUT  58  
NUT  H20  H20  H   0  1  N  N  N  -29.600   2.515  -14.108   6.765   4.429  -2.864  H20  NUT  59  
NUT  H21  H21  H   0  1  N  N  N  -28.857   1.929  -15.635   5.101   3.961  -3.290  H21  NUT  60  
NUT  H22  H22  H   0  1  N  N  N  -22.628   9.125  -15.511  -0.387  -1.259   1.952  H22  NUT  61  
NUT  H23  H23  H   0  1  N  N  N  -21.921  10.959  -14.238  -2.566  -2.135   1.614  H23  NUT  62  
NUT  H24  H24  H   0  1  N  N  N  -21.316  11.920  -12.020  -4.475  -2.547   0.115  H24  NUT  63  
NUT  H25  H25  H   0  1  N  N  N  -23.292   8.645  -10.023  -2.898   0.279  -2.666  H25  NUT  64  
NUT  H26  H26  H   0  1  N  N  N  -23.853   7.653  -12.249  -0.995   0.697  -1.161  H26  NUT  65  
NUT  H27  H27  H   0  1  N  N  N  -24.850   9.566  -16.118  -0.628   0.765   3.038  H27  NUT  66  
NUT  H30  H30  H   0  1  N  N  N  -24.532  11.962  -15.844  -1.124   2.314  -0.298  H30  NUT  67  
NUT  H31  H31  H   0  1  N  N  N  -25.196  14.011  -14.579  -3.217   3.417  -0.981  H31  NUT  68  
NUT  H32  H32  H   0  1  N  N  N  -26.578  11.593  -11.263  -5.090   2.084   2.614  H32  NUT  69  
NUT  H33  H33  H   0  1  N  N  N  -25.978   9.549  -12.603  -3.000   0.973   3.290  H33  NUT  70  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
NUT  O2   C28  DOUB  N  N   1  
NUT  C28  C29  SING  N  N   2  
NUT  C28  N3   SING  N  N   3  
NUT  C29  N2   SING  N  N   4  
NUT  O3   C25  DOUB  N  N   5  
NUT  N3   C27  SING  N  N   6  
NUT  C25  N2   SING  N  N   7  
NUT  C25  N1   SING  N  N   8  
NUT  N2   C26  SING  N  N   9  
NUT  C27  C26  SING  N  N  10  
NUT  C11  C18  SING  N  N  11  
NUT  C11  N    SING  N  N  12  
NUT  C11  C12  SING  N  N  13  
NUT  C3   C2   DOUB  Y  N  14  
NUT  C3   C9   SING  Y  N  15  
NUT  N1   C18  SING  N  N  16  
NUT  N1   C10  SING  N  N  17  
NUT  C2   C1   SING  Y  N  18  
NUT  C17  C12  DOUB  Y  N  19  
NUT  C17  C16  SING  Y  N  20  
NUT  C18  C19  SING  N  N  21  
NUT  C10  N    DOUB  N  N  22  
NUT  C10  C9   SING  N  N  23  
NUT  C9   C5   DOUB  Y  N  24  
NUT  C    O    SING  N  N  25  
NUT  C12  C13  SING  Y  N  26  
NUT  C1   O    SING  N  N  27  
NUT  C1   C4   DOUB  Y  N  28  
NUT  C16  C15  DOUB  Y  N  29  
NUT  C5   C4   SING  Y  N  30  
NUT  C5   O1   SING  N  N  31  
NUT  C8   C6   SING  N  N  32  
NUT  O1   C6   SING  N  N  33  
NUT  C19  C24  DOUB  Y  N  34  
NUT  C19  C20  SING  Y  N  35  
NUT  C24  C23  SING  Y  N  36  
NUT  C13  C14  DOUB  Y  N  37  
NUT  C15  C14  SING  Y  N  38  
NUT  C15  CL   SING  N  N  39  
NUT  C6   C7   SING  N  N  40  
NUT  C20  C21  DOUB  Y  N  41  
NUT  C23  C22  DOUB  Y  N  42  
NUT  C21  C22  SING  Y  N  43  
NUT  C22  CL1  SING  N  N  44  
NUT  C29  H1   SING  N  N  45  
NUT  C29  H2   SING  N  N  46  
NUT  N3   H3   SING  N  N  47  
NUT  C27  H4   SING  N  N  48  
NUT  C27  H5   SING  N  N  49  
NUT  C26  H6   SING  N  N  50  
NUT  C26  H7   SING  N  N  51  
NUT  C3   H9   SING  N  N  52  
NUT  C2   H10  SING  N  N  53  
NUT  C6   H11  SING  N  N  54  
NUT  C8   H12  SING  N  N  55  
NUT  C8   H13  SING  N  N  56  
NUT  C8   H14  SING  N  N  57  
NUT  C7   H15  SING  N  N  58  
NUT  C7   H16  SING  N  N  59  
NUT  C7   H17  SING  N  N  60  
NUT  C4   H18  SING  N  N  61  
NUT  C    H19  SING  N  N  62  
NUT  C    H20  SING  N  N  63  
NUT  C    H21  SING  N  N  64  
NUT  C18  H22  SING  N  N  65  
NUT  C24  H23  SING  N  N  66  
NUT  C23  H24  SING  N  N  67  
NUT  C21  H25  SING  N  N  68  
NUT  C20  H26  SING  N  N  69  
NUT  C11  H27  SING  N  N  70  
NUT  C17  H30  SING  N  N  71  
NUT  C16  H31  SING  N  N  72  
NUT  C14  H32  SING  N  N  73  
NUT  C13  H33  SING  N  N  74  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
NUT  SMILES            ACDLabs               12.01  "O=C5NCCN(C(=O)N3C(=NC(c1ccc(Cl)cc1)C3c2ccc(Cl)cc2)c4ccc(OC)cc4OC(C)C)C5"  
NUT  InChI             InChI                 1.03   "InChI=1S/C30H30Cl2N4O4/c1-18(2)40-25-16-23(39-3)12-13-24(25)29-34-27(19-4-8-21(31)9-5-19)28(20-6-10-22(32)11-7-20)36(29)30(38)35-15-14-33-26(37)17-35/h4-13,16,18,27-28H,14-15,17H2,1-3H3,(H,33,37)/t27-,28+/m0/s1"  
NUT  InChIKey          InChI                 1.03   BDUHCSBCVGXTJM-WUFINQPMSA-N  
NUT  SMILES_CANONICAL  CACTVS                3.370  "COc1ccc(c(OC(C)C)c1)C2=N[C@H]([C@H](N2C(=O)N3CCNC(=O)C3)c4ccc(Cl)cc4)c5ccc(Cl)cc5"  
NUT  SMILES            CACTVS                3.370  "COc1ccc(c(OC(C)C)c1)C2=N[CH]([CH](N2C(=O)N3CCNC(=O)C3)c4ccc(Cl)cc4)c5ccc(Cl)cc5"  
NUT  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.6  "CC(C)Oc1cc(ccc1C2=N[C@H]([C@H](N2C(=O)N3CCNC(=O)C3)c4ccc(cc4)Cl)c5ccc(cc5)Cl)OC"  
NUT  SMILES            "OpenEye OEToolkits"  1.7.6  "CC(C)Oc1cc(ccc1C2=NC(C(N2C(=O)N3CCNC(=O)C3)c4ccc(cc4)Cl)c5ccc(cc5)Cl)OC"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
NUT  "SYSTEMATIC NAME"  ACDLabs               12.01  "4-({(4S,5R)-4,5-bis(4-chlorophenyl)-2-[4-methoxy-2-(propan-2-yloxy)phenyl]-4,5-dihydro-1H-imidazol-1-yl}carbonyl)piperazin-2-one"  
NUT  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.6  "4-[[(4S,5R)-4,5-bis(4-chlorophenyl)-2-(4-methoxy-2-propan-2-yloxy-phenyl)-4,5-dihydroimidazol-1-yl]carbonyl]piperazin-2-one"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
NUT  "Create component"  2012-10-12  RCSB  
NUT  "Initial release"   2013-04-24  RCSB  
NUT  "Modify synonyms"   2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     NUT
_pdbx_chem_comp_synonyms.name        "Nutlin 3a"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
