data_SDR
# 
_chem_comp.id                                    SDR 
_chem_comp.name                                  "(2S)-2-[(N-acetyl-L-alpha-aspartyl)amino]nonanoic acid" 
_chem_comp.type                                  peptide-like 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C15 H26 N2 O6" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2011-07-15 
_chem_comp.pdbx_modified_date                    2011-09-30 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        330.377 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     SDR 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3SJE 
_chem_comp.pdbx_subcomponent_list                "ACE ASP AN8" 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
SDR CAR  CAR  C 0 1 N N N 20.176 43.654 46.241 3.239  -1.737 -1.802 C    ACE 1  
SDR OAC  OAC  O 0 1 N N N 19.897 44.500 47.124 2.155  -2.247 -1.995 O    ACE 2  
SDR CAB  CAB  C 0 1 N N N 21.180 42.529 46.531 4.413  -2.114 -2.668 CH3  ACE 3  
SDR NAP  NAP  N 0 1 N N N 19.794 43.723 44.948 3.393  -0.834 -0.814 N    ASP 4  
SDR CAW  CAW  C 0 1 N N S 18.885 44.778 44.410 2.282  -0.548 0.097  CA   ASP 5  
SDR CAU  CAU  C 0 1 N N N 18.083 44.285 43.173 1.407  0.525  -0.499 C    ASP 6  
SDR OAF  OAF  O 0 1 N N N 18.411 43.311 42.490 1.685  1.003  -1.578 O    ASP 7  
SDR CAO  CAO  C 0 1 N N N 19.703 46.031 43.989 2.834  -0.068 1.441  CB   ASP 8  
SDR CAS  CAS  C 0 1 N N N 20.360 46.739 45.203 3.596  -1.189 2.100  CG   ASP 9  
SDR OAD  OAD  O 0 1 N N N 21.563 46.449 45.470 3.757  -2.235 1.517  OD1  ASP 10 
SDR OAG  OAG  O 0 1 N N N 19.657 47.550 45.825 4.095  -1.026 3.335  OD2  ASP 11 
SDR C    C    C 0 1 N N N 17.028 44.626 40.341 0.030  3.350  -0.069 C    AN8 12 
SDR N    N    N 0 1 N N N 16.997 44.970 42.852 0.317  0.952  0.168  N    AN8 13 
SDR O    O    O 0 1 N N N 16.675 43.899 39.397 1.038  3.436  0.592  O    AN8 14 
SDR CA   CA   C 0 1 N N S 16.205 44.553 41.669 -0.534 1.995  -0.412 CA   AN8 15 
SDR CB   CB   C 0 1 N N N 15.017 45.506 41.611 -1.949 1.873  0.156  CB   AN8 16 
SDR CAA  CAA  C 0 1 N N N 11.602 49.351 39.727 -8.050 -2.468 0.498  CAA  AN8 17 
SDR CAI  CAI  C 0 1 N N N 13.096 49.706 39.726 -6.635 -2.345 -0.070 CAI  AN8 18 
SDR CAJ  CAJ  C 0 1 N N N 13.925 48.542 40.271 -6.017 -1.021 0.384  CAJ  AN8 19 
SDR CAK  CAK  C 0 1 N N N 13.613 47.266 39.505 -4.601 -0.898 -0.184 CAK  AN8 20 
SDR CAL  CAL  C 0 1 N N N 12.966 46.181 40.367 -3.983 0.426  0.270  CAL  AN8 21 
SDR CAM  CAM  C 0 1 N N N 13.963 45.050 40.615 -2.567 0.548  -0.298 CAM  AN8 22 
SDR OXT  OXT  O 0 1 N N N 18.007 45.406 40.299 -0.592 4.462  -0.492 OXT  AN8 23 
SDR HAB  HAB  H 0 1 N N N 21.551 42.625 47.562 4.936  -2.961 -2.224 H1   ACE 24 
SDR HABA HABA H 0 0 N N N 20.684 41.555 46.409 4.059  -2.387 -3.662 H2   ACE 25 
SDR HABB HABB H 0 0 N N N 22.024 42.601 45.830 5.095  -1.267 -2.746 H3   ACE 26 
SDR HNAP HNAP H 0 0 N N N 20.139 43.029 44.316 4.240  -0.373 -0.706 H    ASP 27 
SDR HAW  HAW  H 0 1 N N N 18.179 45.026 45.216 1.694  -1.454 0.248  HA   ASP 28 
SDR HAO  HAO  H 0 1 N N N 20.497 45.714 43.297 2.010  0.239  2.084  HB2  ASP 29 
SDR HAOA HAOA H 0 0 N N N 19.025 46.742 43.494 3.502  0.778  1.277  HB3  ASP 30 
SDR HOAG HOAG H 0 0 N N N 20.161 47.925 46.538 4.575  -1.773 3.717  HD2  ASP 31 
SDR HN   HN   H 0 1 N N N 16.714 45.758 43.399 0.095  0.569  1.031  HN   AN8 32 
SDR HA   HA   H 0 1 N N N 15.896 43.502 41.768 -0.565 1.878  -1.495 HA   AN8 33 
SDR HB   HB   H 0 1 N N N 14.558 45.555 42.609 -1.908 1.900  1.244  HB   AN8 34 
SDR HBA  HBA  H 0 1 N N N 15.379 46.499 41.308 -2.559 2.701  -0.206 HBA  AN8 35 
SDR HAA  HAA  H 0 1 N N N 11.023 50.199 39.332 -8.009 -2.440 1.586  HAA  AN8 36 
SDR HAAA HAAA H 0 0 N N N 11.435 48.467 39.094 -8.660 -1.640 0.136  HAAA AN8 37 
SDR HAAB HAAB H 0 0 N N N 11.278 49.133 40.755 -8.491 -3.411 0.175  HAAB AN8 38 
SDR HAI  HAI  H 0 1 N N N 13.414 49.923 38.696 -6.025 -3.173 0.292  HAI  AN8 39 
SDR HAIA HAIA H 0 0 N N N 13.256 50.590 40.360 -6.676 -2.373 -1.159 HAIA AN8 40 
SDR HAJ  HAJ  H 0 1 N N N 14.994 48.777 40.161 -6.626 -0.193 0.022  HAJ  AN8 41 
SDR HAJA HAJA H 0 0 N N N 13.684 48.393 41.334 -5.976 -0.993 1.472  HAJA AN8 42 
SDR HAK  HAK  H 0 1 N N N 12.918 47.517 38.690 -3.992 -1.727 0.178  HAK  AN8 43 
SDR HAKA HAKA H 0 0 N N N 14.557 46.868 39.104 -4.642 -0.926 -1.273 HAKA AN8 44 
SDR HAL  HAL  H 0 1 N N N 12.661 46.615 41.331 -4.592 1.254  -0.092 HAL  AN8 45 
SDR HALA HALA H 0 0 N N N 12.083 45.781 39.847 -3.942 0.454  1.358  HALA AN8 46 
SDR HAM  HAM  H 0 1 N N N 14.450 44.778 39.667 -2.609 0.521  -1.387 HAM  AN8 47 
SDR HAMA HAMA H 0 0 N N N 13.431 44.176 41.020 -1.958 -0.280 0.064  HAMA AN8 48 
SDR HXT  HXT  H 0 1 N N N 18.422 45.349 39.446 -0.193 5.308  -0.247 HXT  AN8 49 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
SDR O   C    DOUB N N 1  
SDR OXT C    SING N N 2  
SDR C   CA   SING N N 3  
SDR CA  N    SING N N 4  
SDR N   CAU  SING N N 5  
SDR N   HN   SING N N 6  
SDR CB  CA   SING N N 7  
SDR CA  HA   SING N N 8  
SDR CAM CB   SING N N 9  
SDR CB  HB   SING N N 10 
SDR CB  HBA  SING N N 11 
SDR CAI CAA  SING N N 12 
SDR CAA HAA  SING N N 13 
SDR CAA HAAA SING N N 14 
SDR CAA HAAB SING N N 15 
SDR CAR CAB  SING N N 16 
SDR CAB HAB  SING N N 17 
SDR CAB HABA SING N N 18 
SDR CAB HABB SING N N 19 
SDR CAR OAC  DOUB N N 20 
SDR CAS OAD  DOUB N N 21 
SDR OAF CAU  DOUB N N 22 
SDR CAS OAG  SING N N 23 
SDR OAG HOAG SING N N 24 
SDR CAI CAJ  SING N N 25 
SDR CAI HAI  SING N N 26 
SDR CAI HAIA SING N N 27 
SDR CAK CAJ  SING N N 28 
SDR CAJ HAJ  SING N N 29 
SDR CAJ HAJA SING N N 30 
SDR CAK CAL  SING N N 31 
SDR CAK HAK  SING N N 32 
SDR CAK HAKA SING N N 33 
SDR CAL CAM  SING N N 34 
SDR CAL HAL  SING N N 35 
SDR CAL HALA SING N N 36 
SDR CAM HAM  SING N N 37 
SDR CAM HAMA SING N N 38 
SDR CAO CAW  SING N N 39 
SDR CAO CAS  SING N N 40 
SDR CAO HAO  SING N N 41 
SDR CAO HAOA SING N N 42 
SDR CAW NAP  SING N N 43 
SDR NAP CAR  SING N N 44 
SDR NAP HNAP SING N N 45 
SDR CAU CAW  SING N N 46 
SDR CAW HAW  SING N N 47 
SDR OXT HXT  SING N N 48 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
SDR SMILES           ACDLabs              12.01 "O=C(NC(C(=O)O)CCCCCCC)C(NC(=O)C)CC(=O)O"                                                                                                                  
SDR InChI            InChI                1.03  "InChI=1S/C15H26N2O6/c1-3-4-5-6-7-8-11(15(22)23)17-14(21)12(9-13(19)20)16-10(2)18/h11-12H,3-9H2,1-2H3,(H,16,18)(H,17,21)(H,19,20)(H,22,23)/t11-,12-/m0/s1" 
SDR InChIKey         InChI                1.03  IRKQLRPKWIMPEM-RYUDHWBXSA-N                                                                                                                                
SDR SMILES_CANONICAL CACTVS               3.370 "CCCCCCC[C@H](NC(=O)[C@H](CC(O)=O)NC(C)=O)C(O)=O"                                                                                                          
SDR SMILES           CACTVS               3.370 "CCCCCCC[CH](NC(=O)[CH](CC(O)=O)NC(C)=O)C(O)=O"                                                                                                            
SDR SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 "CCCCCCC[C@@H](C(=O)O)NC(=O)[C@H](CC(=O)O)NC(=O)C"                                                                                                         
SDR SMILES           "OpenEye OEToolkits" 1.7.2 "CCCCCCCC(C(=O)O)NC(=O)C(CC(=O)O)NC(=O)C"                                                                                                                  
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
SDR "SYSTEMATIC NAME" ACDLabs              12.01 "(2S)-2-[(N-acetyl-L-alpha-aspartyl)amino]nonanoic acid"                            
SDR "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 "(2S)-2-[[(2S)-2-acetamido-4-oxidanyl-4-oxidanylidene-butanoyl]amino]nonanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
SDR "Create component" 2011-07-15 RCSB 
# 
