data_JYN
#

_chem_comp.id                                   JYN
_chem_comp.name                                 "9-(4-azidobutyl)purin-6-amine"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C9 H12 N8"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-04-11
_chem_comp.pdbx_modified_date                   2020-02-14
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       232.245
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    JYN
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6RBP
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
JYN  C2   C1   C   0  1  Y  N  N  22.375  12.177  12.678   2.587   2.206   0.433  C2   JYN   1  
JYN  C4   C2   C   0  1  Y  N  N  20.116  11.804  12.944   1.713   0.081   0.385  C4   JYN   2  
JYN  C5   C3   C   0  1  Y  N  N  19.836  12.951  12.223   2.921  -0.392  -0.156  C5   JYN   3  
JYN  C6   C4   C   0  1  Y  N  N  20.896  13.709  11.748   3.957   0.532  -0.372  C6   JYN   4  
JYN  C8   C5   C   0  1  Y  N  N  17.968  12.042  12.799   1.592  -2.094   0.043  C8   JYN   5  
JYN  CAE  C6   C   0  1  N  N  N  16.345   9.457  13.427  -2.879  -0.675   0.429  CAE  JYN   6  
JYN  CAF  C7   C   0  1  N  N  N  17.796   8.981  13.525  -1.447  -0.666  -0.111  CAF  JYN   7  
JYN  CAG  C8   C   0  1  N  N  N  15.449   8.346  12.882  -3.851  -0.317  -0.697  CAG  JYN   8  
JYN  CAH  C9   C   0  1  N  N  N  18.820  10.013  14.049  -0.475  -1.024   1.016  CAH  JYN   9  
JYN  N1   N1   N   0  1  Y  N  N  22.146  13.290  11.997   3.742   1.808  -0.069  N1   JYN  10  
JYN  N3   N2   N   0  1  Y  N  N  21.388  11.435  13.146   1.592   1.375   0.661  N3   JYN  11  
JYN  N6   N3   N   0  1  N  N  N  20.682  14.828  11.060   5.171   0.124  -0.897  N6   JYN  12  
JYN  N7   N4   N   0  1  Y  N  N  18.513  13.075  12.156   2.780  -1.727  -0.340  N7   JYN  13  
JYN  N9   N5   N   0  1  Y  N  N  18.948  11.252  13.242   0.895  -1.015   0.499  N9   JYN  14  
JYN  NAA  N6   N  -1  1  N  N  N  13.454  10.104  10.562  -6.468   1.543  -0.267  NAA  JYN  15  
JYN  NAI  N7   N   0  1  N  N  N  14.077   8.852  12.759  -5.222  -0.326  -0.180  NAI  JYN  16  
JYN  NAM  N8   N   1  1  N  N  N  13.756   9.479  11.664  -5.845   0.609  -0.223  NAM  JYN  17  
JYN  H1   H1   H   0  1  N  N  N  23.395  11.869  12.855   2.456   3.251   0.669  H1   JYN  18  
JYN  H2   H2   H   0  1  N  N  N  16.910  11.873  12.938   1.214  -3.105   0.006  H2   JYN  19  
JYN  H3   H3   H   0  1  N  N  N  16.294  10.325  12.753  -3.116  -1.667   0.813  H3   JYN  20  
JYN  H4   H4   H   0  1  N  N  N  15.992   9.748  14.427  -2.969   0.056   1.233  H4   JYN  21  
JYN  H5   H5   H   0  1  N  N  N  17.819   8.113  14.200  -1.358  -1.397  -0.914  H5   JYN  22  
JYN  H6   H6   H   0  1  N  N  N  18.116   8.672  12.519  -1.210   0.326  -0.494  H6   JYN  23  
JYN  H7   H7   H   0  1  N  N  N  15.465   7.489  13.571  -3.614   0.675  -1.080  H7   JYN  24  
JYN  H8   H8   H   0  1  N  N  N  15.815   8.029  11.894  -3.761  -1.048  -1.500  H8   JYN  25  
JYN  H9   H9   H   0  1  N  N  N  19.806   9.526  14.081  -0.565  -0.292   1.819  H9   JYN  26  
JYN  H10  H10  H   0  1  N  N  N  18.520  10.301  15.067  -0.713  -2.016   1.399  H10  JYN  27  
JYN  H11  H11  H   0  1  N  N  N  21.559  15.235  10.803   5.876   0.773  -1.049  H11  JYN  28  
JYN  H12  H12  H   0  1  N  N  N  20.158  14.617  10.235   5.316  -0.810  -1.115  H12  JYN  29  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
JYN  NAA  NAM  DOUB  N  N   1  
JYN  N6   C6   SING  N  N   2  
JYN  NAM  NAI  DOUB  N  N   3  
JYN  C6   N1   DOUB  Y  N   4  
JYN  C6   C5   SING  Y  N   5  
JYN  N1   C2   SING  Y  N   6  
JYN  N7   C5   SING  Y  N   7  
JYN  N7   C8   DOUB  Y  N   8  
JYN  C5   C4   DOUB  Y  N   9  
JYN  C2   N3   DOUB  Y  N  10  
JYN  NAI  CAG  SING  N  N  11  
JYN  C8   N9   SING  Y  N  12  
JYN  CAG  CAE  SING  N  N  13  
JYN  C4   N3   SING  Y  N  14  
JYN  C4   N9   SING  Y  N  15  
JYN  N9   CAH  SING  N  N  16  
JYN  CAE  CAF  SING  N  N  17  
JYN  CAF  CAH  SING  N  N  18  
JYN  C2   H1   SING  N  N  19  
JYN  C8   H2   SING  N  N  20  
JYN  CAE  H3   SING  N  N  21  
JYN  CAE  H4   SING  N  N  22  
JYN  CAF  H5   SING  N  N  23  
JYN  CAF  H6   SING  N  N  24  
JYN  CAG  H7   SING  N  N  25  
JYN  CAG  H8   SING  N  N  26  
JYN  CAH  H9   SING  N  N  27  
JYN  CAH  H10  SING  N  N  28  
JYN  N6   H11  SING  N  N  29  
JYN  N6   H12  SING  N  N  30  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
JYN  InChI             InChI                 1.03   "InChI=1S/C9H12N8/c10-8-7-9(13-5-12-8)17(6-14-7)4-2-1-3-15-16-11/h5-6H,1-4H2,(H2,10,12,13)"  
JYN  InChIKey          InChI                 1.03   HVEKFLZTZQALAB-UHFFFAOYSA-N  
JYN  SMILES_CANONICAL  CACTVS                3.385  "Nc1ncnc2n(CCCCN=[N+]=[N-])cnc12"  
JYN  SMILES            CACTVS                3.385  "Nc1ncnc2n(CCCCN=[N+]=[N-])cnc12"  
JYN  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1nc(c2c(n1)n(cn2)CCCCN=[N+]=[N-])N"  
JYN  SMILES            "OpenEye OEToolkits"  2.0.7  "c1nc(c2c(n1)n(cn2)CCCCN=[N+]=[N-])N"  
#
_pdbx_chem_comp_identifier.comp_id          JYN
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "9-(4-azidobutyl)purin-6-amine"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
JYN  "Create component"  2019-04-11  RCSB  
JYN  "Initial release"   2020-02-19  RCSB  
##
