data_F5M
#

_chem_comp.id                                   F5M
_chem_comp.name                                 "5-(2,5-dioxo-2,5-dihydro-1H-pyrrol-1-yl)-2-(6-hydroxy-3-oxo-3H-xanthen-9-yl)benzoic acid"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C24 H13 N O7"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        fluorescein-5-maleimide
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2010-04-13
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       427.363
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    F5M
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3M2J
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
F5M  C1   C1   C  0  1  Y  N  N  17.740  12.668  20.003   3.564  -3.598   0.184  C1   F5M   1  
F5M  O1   O1   O  0  1  N  N  N  18.363  13.421  20.907   4.294  -4.732   0.335  O1   F5M   2  
F5M  C2   C2   C  0  1  Y  N  N  18.280  11.941  19.104   4.209  -2.383   0.023  C2   F5M   3  
F5M  O2   O2   O  0  1  N  N  N  19.024  10.433  17.304   4.086  -0.034  -0.290  O2   F5M   4  
F5M  C3   C3   C  0  1  Y  N  N  18.142  11.123  18.104   3.467  -1.221  -0.132  C3   F5M   5  
F5M  O3   O3   O  0  1  N  N  N  19.766   8.226  13.243   4.013   4.558  -0.900  O3   F5M   6  
F5M  C4   C4   C  0  1  N  N  N  18.514   9.603  16.306   3.407   1.122  -0.444  C4   F5M   7  
F5M  O4   O4   O  0  1  N  N  N  14.729   6.555  16.516   1.032   0.877   2.038  O4   F5M   8  
F5M  C5   C5   C  0  1  N  N  N  19.445   8.922  15.517   4.098   2.307  -0.601  C5   F5M   9  
F5M  O5   O5   O  0  1  N  N  N  14.556   7.454  18.593  -0.868   1.283   3.110  O5   F5M  10  
F5M  C6   C6   C  0  1  N  N  N  19.055   7.979  14.457   3.398   3.508  -0.761  C6   F5M  11  
F5M  C7   C7   C  0  1  N  N  N  17.594   7.887  14.254   1.988   3.516  -0.763  C7   F5M  12  
F5M  C8   C8   C  0  1  N  N  N  16.684   8.578  15.050   1.299   2.357  -0.609  C8   F5M  13  
F5M  C9   C9   C  0  1  N  N  N  17.116   9.432  16.076   1.991   1.142  -0.447  C9   F5M  14  
F5M  C10  C10  C  0  1  N  N  N  16.090  10.134  16.930   1.279  -0.069  -0.288  C10  F5M  15  
F5M  C11  C11  C  0  1  Y  N  N  16.665  11.026  17.946   2.059  -1.299  -0.124  C11  F5M  16  
F5M  C12  C12  C  0  1  Y  N  N  16.141  11.774  18.861   1.423  -2.537   0.040  C12  F5M  17  
F5M  C13  C13  C  0  1  Y  N  N  16.253  12.548  19.864   2.170  -3.668   0.185  C13  F5M  18  
F5M  C14  C14  C  0  1  Y  N  N  14.621   9.991  16.652  -0.192  -0.094  -0.286  C14  F5M  19  
F5M  C15  C15  C  0  1  Y  N  N  13.989  11.111  16.156  -0.888  -0.568  -1.400  C15  F5M  20  
F5M  C16  C16  C  0  1  Y  N  N  12.643  11.108  15.804  -2.266  -0.590  -1.396  C16  F5M  21  
F5M  C17  C17  C  0  1  Y  N  N  11.819   9.992  15.923  -2.973  -0.142  -0.285  C17  F5M  22  
F5M  C18  C18  C  0  1  Y  N  N  12.409   8.805  16.427  -2.296   0.334   0.833  C18  F5M  23  
F5M  C19  C19  C  0  1  Y  N  N  13.783   8.756  16.776  -0.907   0.357   0.845  C19  F5M  24  
F5M  C20  C20  C  0  1  N  N  N  14.404   7.498  17.321  -0.182   0.854   2.033  C20  F5M  25  
F5M  NAB  NAB  N  0  1  N  N  N  10.495  10.167  15.546  -4.370  -0.169  -0.293  NAB  F5M  26  
F5M  CAZ  CAZ  C  0  1  N  N  N   9.544   9.272  15.439  -5.131  -0.604  -1.312  CAZ  F5M  27  
F5M  CBA  CBA  C  0  1  N  N  N   8.184   9.880  15.156  -6.552  -0.468  -0.925  CBA  F5M  28  
F5M  CBB  CBB  C  0  1  N  N  N   8.549  11.281  14.682  -6.569   0.046   0.316  CBB  F5M  29  
F5M  CBC  CBC  C  0  1  N  N  N  10.013  11.313  15.088  -5.159   0.232   0.721  CBC  F5M  30  
F5M  OBJ  OBJ  O  0  1  N  N  N  10.677  12.338  15.060  -4.777   0.673   1.786  OBJ  F5M  31  
F5M  OBK  OBK  O  0  1  N  N  N   9.774   8.033  15.347  -4.721  -1.036  -2.370  OBK  F5M  32  
F5M  HO1  HO1  H  0  1  N  N  N  17.720  13.857  21.454   4.504  -4.944   1.255  HO1  F5M  33  
F5M  H2   H2   H  0  1  N  N  N  19.345  12.061  19.235   5.289  -2.340   0.019  H2   F5M  34  
F5M  H5   H5   H  0  1  N  N  N  20.496   9.095  15.693   5.178   2.307  -0.600  H5   F5M  35  
F5M  HO5  HO5  H  0  1  N  N  N  14.943   6.621  18.838  -0.351   1.600   3.863  HO5  F5M  36  
F5M  H7   H7   H  0  1  N  N  N  17.218   7.260  13.459   1.454   4.447  -0.887  H7   F5M  37  
F5M  H8   H8   H  0  1  N  N  N  15.626   8.454  14.874   0.219   2.367  -0.611  H8   F5M  38  
F5M  H12  H12  H  0  1  N  N  N  15.077  11.709  18.687   0.345  -2.595   0.046  H12  F5M  39  
F5M  H13  H13  H  0  1  N  N  N  15.476  13.002  20.462   1.680  -4.623   0.307  H13  F5M  40  
F5M  H15  H15  H  0  1  N  N  N  14.558  12.021  16.037  -0.345  -0.918  -2.266  H15  F5M  41  
F5M  H16  H16  H  0  1  N  N  N  12.214  12.021  15.418  -2.800  -0.957  -2.260  H16  F5M  42  
F5M  H18  H18  H  0  1  N  N  N  11.800   7.921  16.547  -2.850   0.681   1.693  H18  F5M  43  
F5M  HBA  HBA  H  0  1  N  N  N   7.206   9.434  15.263  -7.411  -0.731  -1.525  HBA  F5M  44  
F5M  HBB  HBB  H  0  1  N  N  N   7.943  12.033  14.198  -7.444   0.276   0.906  HBB  F5M  45  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
F5M  C1   O1   SING  N  N   1  
F5M  C1   C2   DOUB  Y  N   2  
F5M  C1   C13  SING  Y  N   3  
F5M  C2   C3   SING  Y  N   4  
F5M  O2   C3   SING  N  N   5  
F5M  O2   C4   SING  N  N   6  
F5M  C3   C11  DOUB  Y  N   7  
F5M  O3   C6   DOUB  N  N   8  
F5M  C4   C5   DOUB  N  N   9  
F5M  C4   C9   SING  N  N  10  
F5M  O4   C20  DOUB  N  N  11  
F5M  C5   C6   SING  N  N  12  
F5M  O5   C20  SING  N  N  13  
F5M  C6   C7   SING  N  N  14  
F5M  C7   C8   DOUB  N  N  15  
F5M  C8   C9   SING  N  N  16  
F5M  C9   C10  DOUB  N  N  17  
F5M  C10  C11  SING  N  N  18  
F5M  C10  C14  SING  N  N  19  
F5M  C11  C12  SING  Y  N  20  
F5M  C12  C13  DOUB  Y  N  21  
F5M  C14  C15  DOUB  Y  N  22  
F5M  C14  C19  SING  Y  N  23  
F5M  C15  C16  SING  Y  N  24  
F5M  C16  C17  DOUB  Y  N  25  
F5M  C17  C18  SING  Y  N  26  
F5M  C17  NAB  SING  N  N  27  
F5M  C18  C19  DOUB  Y  N  28  
F5M  C19  C20  SING  N  N  29  
F5M  NAB  CAZ  SING  N  N  30  
F5M  NAB  CBC  SING  N  N  31  
F5M  CAZ  CBA  SING  N  N  32  
F5M  CAZ  OBK  DOUB  N  N  33  
F5M  CBA  CBB  DOUB  N  N  34  
F5M  CBB  CBC  SING  N  N  35  
F5M  CBC  OBJ  DOUB  N  N  36  
F5M  O1   HO1  SING  N  N  37  
F5M  C2   H2   SING  N  N  38  
F5M  C5   H5   SING  N  N  39  
F5M  O5   HO5  SING  N  N  40  
F5M  C7   H7   SING  N  N  41  
F5M  C8   H8   SING  N  N  42  
F5M  C12  H12  SING  N  N  43  
F5M  C13  H13  SING  N  N  44  
F5M  C15  H15  SING  N  N  45  
F5M  C16  H16  SING  N  N  46  
F5M  C18  H18  SING  N  N  47  
F5M  CBA  HBA  SING  N  N  48  
F5M  CBB  HBB  SING  N  N  49  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
F5M  SMILES            ACDLabs               12.01  "O=C1C=CC(=O)N1c5ccc(C=2c4c(OC=3C=2C=CC(=O)C=3)cc(O)cc4)c(C(=O)O)c5"  
F5M  SMILES_CANONICAL  CACTVS                3.370  "OC(=O)c1cc(ccc1C2=C3C=CC(=O)C=C3Oc4cc(O)ccc24)N5C(=O)C=CC5=O"  
F5M  SMILES            CACTVS                3.370  "OC(=O)c1cc(ccc1C2=C3C=CC(=O)C=C3Oc4cc(O)ccc24)N5C(=O)C=CC5=O"  
F5M  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.0  "c1cc(c(cc1N2C(=O)C=CC2=O)C(=O)O)C3=C4C=CC(=O)C=C4Oc5c3ccc(c5)O"  
F5M  SMILES            "OpenEye OEToolkits"  1.7.0  "c1cc(c(cc1N2C(=O)C=CC2=O)C(=O)O)C3=C4C=CC(=O)C=C4Oc5c3ccc(c5)O"  
F5M  InChI             InChI                 1.03   "InChI=1S/C24H13NO7/c26-13-2-5-16-19(10-13)32-20-11-14(27)3-6-17(20)23(16)15-4-1-12(9-18(15)24(30)31)25-21(28)7-8-22(25)29/h1-11,26H,(H,30,31)"  
F5M  InChIKey          InChI                 1.03   HFBMFFXWMZRDIY-UHFFFAOYSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
F5M  "SYSTEMATIC NAME"  ACDLabs               12.01  "5-(2,5-dioxo-2,5-dihydro-1H-pyrrol-1-yl)-2-(6-hydroxy-3-oxo-3H-xanthen-9-yl)benzoic acid"  
F5M  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.0  "5-(2,5-dioxopyrrol-1-yl)-2-(3-hydroxy-6-oxo-xanthen-9-yl)benzoic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
F5M  "Create component"      2010-04-13  PDBJ  
F5M  "Modify aromatic_flag"  2011-06-04  RCSB  
F5M  "Modify descriptor"     2011-06-04  RCSB  
F5M  "Modify synonyms"       2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     F5M
_pdbx_chem_comp_synonyms.name        fluorescein-5-maleimide
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
