data_5PM
#

_chem_comp.id                                   5PM
_chem_comp.name                                 "4,4'-sulfanediylbis{N-[(1E)-pyridin-2-ylmethylidene]aniline}"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C24 H18 N4 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "1,1-Bis(N-(4-phenyl)-2-pyridylcarboxaldimine)thioether"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2009-03-17
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       394.492
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    5PM
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3FX8
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
5PM  N11  N11  N  0  1  Y  N  N   4.186  67.990  28.134   7.070   1.332   0.832  N11  5PM   1  
5PM  N12  N12  N  0  1  N  N  N   4.400  67.150  30.548   4.798  -0.240   0.487  N12  5PM   2  
5PM  N13  N13  N  0  1  N  N  N  10.551  63.528  37.235  -4.372   0.356  -0.432  N13  5PM   3  
5PM  N14  N14  N  0  1  Y  N  N  13.015  62.879  37.597  -6.421   2.238  -0.559  N14  5PM   4  
5PM  C1A  C1A  C  0  1  Y  N  N   4.109  68.475  26.896   8.152   2.057   1.017  C1A  5PM   5  
5PM  C1B  C1B  C  0  1  Y  N  N   3.452  67.841  25.834   8.429   3.143   0.204  C1B  5PM   6  
5PM  C1C  C1C  C  0  1  Y  N  N   2.847  66.672  26.092   7.552   3.469  -0.820  C1C  5PM   7  
5PM  C1D  C1D  C  0  1  Y  N  N   2.905  66.151  27.368   6.421   2.690  -0.995  C1D  5PM   8  
5PM  C1E  C1E  C  0  1  Y  N  N   3.588  66.815  28.360   6.204   1.609  -0.138  C1E  5PM   9  
5PM  C1F  C1F  C  0  1  N  N  N   3.733  66.401  29.742   5.005   0.769  -0.310  C1F  5PM  10  
5PM  C1G  C1G  C  0  1  Y  N  N   4.542  66.679  31.918   3.686  -1.019   0.327  C1G  5PM  11  
5PM  C1H  C1H  C  0  1  Y  N  N   3.869  67.224  32.987   2.439  -0.424   0.112  C1H  5PM  12  
5PM  C1I  C1I  C  0  1  Y  N  N   4.038  66.696  34.276   1.321  -1.212  -0.049  C1I  5PM  13  
5PM  C1J  C1J  C  0  1  Y  N  N   4.912  65.663  34.525   1.431  -2.598   0.004  C1J  5PM  14  
5PM  C1K  C1K  C  0  1  Y  N  N   5.586  65.111  33.423   2.671  -3.193   0.218  C1K  5PM  15  
5PM  C1L  C1L  C  0  1  Y  N  N   5.401  65.618  32.141   3.794  -2.412   0.374  C1L  5PM  16  
5PM  S1M  S1M  S  0  1  N  N  N   5.165  65.105  35.908  -0.002  -3.602  -0.202  S1M  5PM  17  
5PM  C1N  C1N  C  0  1  Y  N  N   6.566  64.654  36.268  -1.307  -2.420  -0.271  C1N  5PM  18  
5PM  C1O  C1O  C  0  1  Y  N  N   6.839  63.424  36.815  -1.765  -1.963  -1.503  C1O  5PM  19  
5PM  C1P  C1P  C  0  1  Y  N  N   8.127  63.044  37.164  -2.785  -1.039  -1.560  C1P  5PM  20  
5PM  C1Q  C1Q  C  0  1  Y  N  N   9.170  63.881  36.936  -3.361  -0.561  -0.379  C1Q  5PM  21  
5PM  C1R  C1R  C  0  1  Y  N  N   8.926  65.084  36.362  -2.898  -1.023   0.857  C1R  5PM  22  
5PM  C1S  C1S  C  0  1  Y  N  N   7.641  65.461  36.053  -1.882  -1.951   0.907  C1S  5PM  23  
5PM  C1T  C1T  C  0  1  N  N  N  11.153  64.232  38.116  -5.427   0.206   0.318  C1T  5PM  24  
5PM  C1U  C1U  C  0  1  Y  N  N  12.536  63.907  38.378  -6.518   1.195   0.260  C1U  5PM  25  
5PM  C1V  C1V  C  0  1  Y  N  N  13.328  64.543  39.333  -7.646   1.030   1.067  C1V  5PM  26  
5PM  C1W  C1W  C  0  1  Y  N  N  14.638  64.138  39.486  -8.662   1.968   1.001  C1W  5PM  27  
5PM  C1X  C1X  C  0  1  Y  N  N  15.100  63.117  38.668  -8.519   3.040   0.132  C1X  5PM  28  
5PM  C1Y  C1Y  C  0  1  Y  N  N  14.285  62.521  37.739  -7.373   3.142  -0.639  C1Y  5PM  29  
5PM  H1A  H1A  H  0  1  N  N  N   4.586  69.423  26.697   8.834   1.802   1.815  H1A  5PM  30  
5PM  H1B  H1B  H  0  1  N  N  N   3.433  68.276  24.846   9.320   3.732   0.366  H1B  5PM  31  
5PM  H1C  H1C  H  0  1  N  N  N   2.321  66.145  25.310   7.747   4.312  -1.466  H1C  5PM  32  
5PM  H1D  H1D  H  0  1  N  N  N   2.411  65.216  27.589   5.717   2.916  -1.782  H1D  5PM  33  
5PM  H1F  H1F  H  0  1  N  N  N   3.289  65.480  30.089   4.298   0.991  -1.096  H1F  5PM  34  
5PM  H1H  H1H  H  0  1  N  N  N   3.207  68.063  32.833   2.353   0.652   0.072  H1H  5PM  35  
5PM  H1I  H1I  H  0  1  N  N  N   3.467  67.111  35.094   0.357  -0.753  -0.215  H1I  5PM  36  
5PM  H1K  H1K  H  0  1  N  N  N   6.259  64.280  33.574   2.753  -4.270   0.258  H1K  5PM  37  
5PM  H1L  H1L  H  0  1  N  N  N   5.934  65.178  31.311   4.756  -2.875   0.536  H1L  5PM  38  
5PM  H1O  H1O  H  0  1  N  N  N   6.026  62.732  36.978  -1.320  -2.332  -2.415  H1O  5PM  39  
5PM  H1P  H1P  H  0  1  N  N  N   8.300  62.080  37.618  -3.139  -0.684  -2.516  H1P  5PM  40  
5PM  H1R  H1R  H  0  1  N  N  N   9.747  65.751  36.146  -3.340  -0.656   1.771  H1R  5PM  41  
5PM  H1S  H1S  H  0  1  N  N  N   7.477  66.438  35.622  -1.527  -2.312   1.861  H1S  5PM  42  
5PM  H1T  H1T  H  0  1  N  N  N  10.651  65.032  38.640  -5.501  -0.642   0.982  H1T  5PM  43  
5PM  H1V  H1V  H  0  1  N  N  N  12.924  65.338  39.942  -7.724   0.183   1.732  H1V  5PM  44  
5PM  H1W  H1W  H  0  1  N  N  N  15.283  64.601  40.219  -9.546   1.867   1.612  H1W  5PM  45  
5PM  H1X  H1X  H  0  1  N  N  N  16.123  62.784  38.765  -9.294   3.788   0.058  H1X  5PM  46  
5PM  H1Y  H1Y  H  0  1  N  N  N  14.687  61.742  37.108  -7.260   3.976  -1.316  H1Y  5PM  47  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
5PM  C1A  N11  DOUB  Y  N   1  
5PM  N11  C1E  SING  Y  N   2  
5PM  C1F  N12  DOUB  N  N   3  
5PM  N12  C1G  SING  N  N   4  
5PM  C1Q  N13  SING  N  N   5  
5PM  N13  C1T  DOUB  N  N   6  
5PM  N14  C1Y  DOUB  Y  N   7  
5PM  N14  C1U  SING  Y  N   8  
5PM  C1B  C1A  SING  Y  N   9  
5PM  C1A  H1A  SING  N  N  10  
5PM  C1B  C1C  DOUB  Y  N  11  
5PM  C1B  H1B  SING  N  N  12  
5PM  C1C  C1D  SING  Y  N  13  
5PM  C1C  H1C  SING  N  N  14  
5PM  C1D  C1E  DOUB  Y  N  15  
5PM  C1D  H1D  SING  N  N  16  
5PM  C1E  C1F  SING  N  N  17  
5PM  C1F  H1F  SING  N  N  18  
5PM  C1G  C1L  DOUB  Y  N  19  
5PM  C1G  C1H  SING  Y  N  20  
5PM  C1H  C1I  DOUB  Y  N  21  
5PM  C1H  H1H  SING  N  N  22  
5PM  C1I  C1J  SING  Y  N  23  
5PM  C1I  H1I  SING  N  N  24  
5PM  C1K  C1J  DOUB  Y  N  25  
5PM  C1J  S1M  SING  N  N  26  
5PM  C1L  C1K  SING  Y  N  27  
5PM  C1K  H1K  SING  N  N  28  
5PM  C1L  H1L  SING  N  N  29  
5PM  S1M  C1N  SING  N  N  30  
5PM  C1S  C1N  DOUB  Y  N  31  
5PM  C1N  C1O  SING  Y  N  32  
5PM  C1O  C1P  DOUB  Y  N  33  
5PM  C1O  H1O  SING  N  N  34  
5PM  C1Q  C1P  SING  Y  N  35  
5PM  C1P  H1P  SING  N  N  36  
5PM  C1R  C1Q  DOUB  Y  N  37  
5PM  C1S  C1R  SING  Y  N  38  
5PM  C1R  H1R  SING  N  N  39  
5PM  C1S  H1S  SING  N  N  40  
5PM  C1T  C1U  SING  N  N  41  
5PM  C1T  H1T  SING  N  N  42  
5PM  C1U  C1V  DOUB  Y  N  43  
5PM  C1V  C1W  SING  Y  N  44  
5PM  C1V  H1V  SING  N  N  45  
5PM  C1X  C1W  DOUB  Y  N  46  
5PM  C1W  H1W  SING  N  N  47  
5PM  C1Y  C1X  SING  Y  N  48  
5PM  C1X  H1X  SING  N  N  49  
5PM  C1Y  H1Y  SING  N  N  50  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
5PM  SMILES            ACDLabs               10.04  "N(/c3ccc(Sc2ccc(/N=C/c1ncccc1)cc2)cc3)=C\c4ncccc4"  
5PM  SMILES_CANONICAL  CACTVS                3.341  "S(c1ccc(cc1)N=Cc2ccccn2)c3ccc(cc3)N=Cc4ccccn4"  
5PM  SMILES            CACTVS                3.341  "S(c1ccc(cc1)N=Cc2ccccn2)c3ccc(cc3)N=Cc4ccccn4"  
5PM  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "c1ccnc(c1)\C=N\c2ccc(cc2)Sc3ccc(cc3)/N=C/c4ccccn4"  
5PM  SMILES            "OpenEye OEToolkits"  1.5.0  "c1ccnc(c1)C=Nc2ccc(cc2)Sc3ccc(cc3)N=Cc4ccccn4"  
5PM  InChI             InChI                 1.03   "InChI=1S/C24H18N4S/c1-3-15-25-21(5-1)17-27-19-7-11-23(12-8-19)29-24-13-9-20(10-14-24)28-18-22-6-2-4-16-26-22/h1-18H/b27-17+,28-18+"  
5PM  InChIKey          InChI                 1.03   KHOHHSYBCGDFBZ-XUIWWLCJSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
5PM  "SYSTEMATIC NAME"  ACDLabs               10.04  "4,4'-sulfanediylbis{N-[(1E)-pyridin-2-ylmethylidene]aniline}"  
5PM  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "1-pyridin-2-yl-N-[4-[4-(pyridin-2-ylmethylideneamino)phenyl]sulfanylphenyl]methanimine"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
5PM  "Create component"      2009-03-17  RCSB  
5PM  "Modify aromatic_flag"  2011-06-04  RCSB  
5PM  "Modify descriptor"     2011-06-04  RCSB  
5PM  "Modify synonyms"       2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     5PM
_pdbx_chem_comp_synonyms.name        "1,1-Bis(N-(4-phenyl)-2-pyridylcarboxaldimine)thioether"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
