data_GTH
#

_chem_comp.id                                   GTH
_chem_comp.name                                 3-O-GLUCOPYRANOSYL-THREONINE-[2-DEOXY-2-ACETAMIDO-GLUCOPYRANOSIDE]
_chem_comp.type                                 SACCHARIDE
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C18 H32 N2 O13"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "GLYCOSYLATED THREONINE"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    1999-07-08
_chem_comp.pdbx_modified_date                   2020-07-03
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  OBS
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       484.452
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    GTH
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       ?
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
GTH  N     N     N  0  1  N  N  N   -6.850   0.108  -0.665   2.098   0.701   0.743  N     GTH   1  
GTH  N1    N1    N  0  1  N  N  N   -2.447  -2.716   0.795   1.268   0.604   5.868  N1    GTH   2  
GTH  CA    CA    C  0  1  N  N  S   -3.754  -2.964   0.103  -0.118   0.402   5.430  CA    GTH   3  
GTH  C     C     C  0  1  N  N  N   -3.768  -4.443  -0.421  -0.397  -1.073   5.310  C     GTH   4  
GTH  O     O     O  0  1  N  N  N   -2.740  -5.133  -0.411   0.495  -1.835   5.024  O     GTH   5  
GTH  OXT   OXT   O  0  1  N  Y  N   -4.940  -4.949  -0.858  -1.637  -1.541   5.521  OXT   GTH   6  
GTH  CB    CB    C  0  1  N  N  R   -3.986  -1.952  -1.074  -0.327   1.073   4.071  CB    GTH   7  
GTH  CG    CG    C  0  1  N  N  N   -2.720  -1.683  -1.942  -0.044   2.571   4.192  CG    GTH   8  
GTH  C1    C1    C  0  1  N  N  R   -8.162   1.751  -5.421  -0.942   0.878  -4.276  C1    GTH   9  
GTH  O1    O1    O  0  1  N  N  N   -7.419   0.903  -4.509  -0.726   0.048  -3.136  O1    GTH  10  
GTH  C2    C2    C  0  1  N  N  R   -7.516  -0.537  -4.702   0.665   0.092  -2.828  C2    GTH  11  
GTH  O2    O2    O  0  1  N  N  N   -8.516  -1.067  -3.812   0.899  -0.579  -1.588  O2    GTH  12  
GTH  C3    C3    C  0  1  N  N  R   -7.889  -0.858  -6.171   1.463  -0.595  -3.938  C3    GTH  13  
GTH  O3    O3    O  0  1  N  N  N   -7.516  -2.196  -6.479   2.854  -0.574  -3.611  O3    GTH  14  
GTH  C4    C4    C  0  1  N  N  S   -7.161   0.134  -7.119   1.233   0.153  -5.255  C4    GTH  15  
GTH  O4    O4    O  0  1  N  N  N   -7.424  -0.207  -8.476   1.849  -0.560  -6.329  O4    GTH  16  
GTH  C5    C5    C  0  1  N  N  R   -7.561   1.615  -6.854  -0.275   0.254  -5.504  C5    GTH  17  
GTH  O5    O5    O  0  1  N  N  N   -8.511   2.037  -7.830  -0.813  -1.049  -5.730  O5    GTH  18  
GTH  C6    C6    C  0  1  N  N  N   -9.652   1.389  -5.290  -2.445   1.013  -4.528  C6    GTH  19  
GTH  O6    O6    O  0  1  N  N  N  -10.446   2.558  -5.135  -3.069   1.601  -3.385  O6    GTH  20  
GTH  C7    C7    C  0  1  N  N  R   -8.756  -3.262  -2.078  -2.012   0.121   0.672  C7    GTH  21  
GTH  O7    O7    O  0  1  N  N  N   -7.306  -3.266  -2.141  -1.316  -0.136   1.890  O7    GTH  22  
GTH  C8    C8    C  0  1  N  N  R   -6.502  -2.211  -1.528  -0.084   0.581   1.843  C8    GTH  23  
GTH  O8    O8    O  0  1  N  N  N   -5.104  -2.441  -1.901   0.563   0.496   3.113  O8    GTH  24  
GTH  C9    C9    C  0  1  N  N  R   -6.983  -0.760  -1.868   0.823  -0.020   0.767  C9    GTH  25  
GTH  C10   C10   C  0  1  N  N  R   -8.450  -0.778  -2.388   0.135   0.107  -0.595  C10   GTH  26  
GTH  C11   C11   C  0  1  N  N  R   -9.283  -1.863  -1.650  -1.261  -0.516  -0.499  C11   GTH  27  
GTH  O9    O9    O  0  1  N  N  N  -10.669  -1.717  -1.959  -1.144  -1.923  -0.282  O9    GTH  28  
GTH  C12   C12   C  0  1  N  N  N   -9.264  -3.723  -3.459  -3.420  -0.472   0.755  C12   GTH  29  
GTH  O10   O10   O  0  1  N  N  N   -9.583  -5.109  -3.465  -4.125   0.126   1.844  O10   GTH  30  
GTH  C13   C13   C  0  1  N  N  N   -6.356   1.356  -0.712   3.124   0.283   1.510  C13   GTH  31  
GTH  O11   O11   O  0  1  N  N  N   -5.939   1.893  -1.742   2.992  -0.691   2.220  O11   GTH  32  
GTH  C14   C14   C  0  1  N  N  N   -6.361   2.126   0.609   4.435   1.025   1.484  C14   GTH  33  
GTH  HN    HN    H  0  1  N  N  N   -7.178  -0.193   0.260   2.203   1.480   0.175  HN    GTH  34  
GTH  HN11  1HN1  H  0  0  N  N  N   -1.824  -3.491   1.055   1.858   0.183   5.166  HN11  GTH  35  
GTH  HN12  2HN1  H  0  0  N  N  N   -1.644  -2.929   0.203   1.441   1.598   5.834  HN12  GTH  36  
GTH  HA    HA    H  0  1  N  N  N   -4.585  -2.846   0.829  -0.798   0.842   6.160  HA    GTH  37  
GTH  HXT   HXT   H  0  1  N  N  N   -4.948  -5.844  -1.175  -1.816  -2.488   5.444  HXT   GTH  38  
GTH  HB    HB    H  0  1  N  N  N   -4.276  -0.989  -0.610  -1.356   0.923   3.745  HB    GTH  39  
GTH  HG1   1HG   H  0  1  N  N  N   -2.618  -0.615  -2.204   0.985   2.721   4.517  HG1   GTH  40  
GTH  HG2   2HG   H  0  1  N  N  N   -1.773  -1.911  -1.423  -0.192   3.049   3.224  HG2   GTH  41  
GTH  HG3   3HG   H  0  1  N  N  N   -2.729  -2.255  -2.890  -0.723   3.011   4.922  HG3   GTH  42  
GTH  H1    H1    H  0  1  N  N  N   -8.052   2.803  -5.089  -0.515   1.864  -4.093  H1    GTH  43  
GTH  H2    H2    H  0  1  N  N  N   -6.536  -1.008  -4.470   0.985   1.131  -2.743  H2    GTH  44  
GTH  H3    H3    H  0  1  N  N  N   -8.984  -0.757  -6.298   1.129  -1.628  -4.042  H3    GTH  45  
GTH  HO3   HO3   H  0  1  N  N  N   -8.101  -2.478  -7.186   2.953  -1.055  -2.778  HO3   GTH  46  
GTH  H4    H4    H  0  1  N  N  N   -6.071   0.034  -6.953   1.661   1.153  -5.188  H4    GTH  47  
GTH  HO4   HO4   H  0  1  N  N  N   -8.275  -0.651  -8.477   2.795  -0.600  -6.132  HO4   GTH  48  
GTH  H5    H5    H  0  1  N  N  N   -6.664   2.256  -6.939  -0.459   0.881  -6.377  H5    GTH  49  
GTH  HO5   HO5   H  0  1  N  N  N   -8.019   2.153  -8.646  -0.366  -1.404  -6.511  HO5   GTH  50  
GTH  H61   1H6   H  0  1  N  N  N   -9.989   0.847  -6.193  -2.611   1.647  -5.400  H61   GTH  51  
GTH  H62   2H6   H  0  1  N  N  N   -9.826   0.704  -4.439  -2.873   0.027  -4.709  H62   GTH  52  
GTH  HO6   HO6   H  0  1  N  N  N  -11.322   2.321  -5.448  -4.012   1.669  -3.586  HO6   GTH  53  
GTH  H7    H7    H  0  1  N  N  N   -9.077  -4.009  -1.327  -2.081   1.197   0.515  H7    GTH  54  
GTH  H8    H8    H  0  1  N  N  N   -6.578  -2.361  -0.433  -0.282   1.626   1.606  H8    GTH  55  
GTH  H9    H9    H  0  1  N  N  N   -6.358  -0.366  -2.688   1.004  -1.072   0.987  H9    GTH  56  
GTH  H10   H10   H  0  1  N  N  N   -8.905   0.210  -2.162   0.047   1.160  -0.865  H10   GTH  57  
GTH  H11   H11   H  0  1  N  N  N   -9.157  -1.739  -0.559  -1.807  -0.333  -1.424  H11   GTH  58  
GTH  HO9   HO9   H  0  1  N  N  N  -10.708  -1.253  -2.799  -2.044  -2.272  -0.221  HO9   GTH  59  
GTH  H121  1H12  H  0  0  N  N  N   -8.498  -3.525  -4.232  -3.953  -0.275  -0.174  H121  GTH  60  
GTH  H122  2H12  H  0  0  N  N  N  -10.155  -3.141  -3.762  -3.351  -1.548   0.914  H122  GTH  61  
GTH  HOA   HOA   H  0  1  N  N  N  -10.527  -5.160  -3.297  -5.005  -0.274   1.861  HOA   GTH  62  
GTH  H141  1H14  H  0  0  N  N  N   -5.341   2.332   0.983   5.139   0.543   2.164  H141  GTH  63  
GTH  H142  2H14  H  0  0  N  N  N   -6.901   1.561   1.391   4.840   1.012   0.473  H142  GTH  64  
GTH  H143  3H14  H  0  0  N  N  N   -6.870   3.102   0.501   4.275   2.056   1.799  H143  GTH  65  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
GTH  N    C9    SING  N  N   1  
GTH  N    C13   SING  N  N   2  
GTH  N    HN    SING  N  N   3  
GTH  N1   CA    SING  N  N   4  
GTH  N1   HN11  SING  N  N   5  
GTH  N1   HN12  SING  N  N   6  
GTH  CA   C     SING  N  N   7  
GTH  CA   CB    SING  N  N   8  
GTH  CA   HA    SING  N  N   9  
GTH  C    O     DOUB  N  N  10  
GTH  C    OXT   SING  N  N  11  
GTH  OXT  HXT   SING  N  N  12  
GTH  CB   CG    SING  N  N  13  
GTH  CB   O8    SING  N  N  14  
GTH  CB   HB    SING  N  N  15  
GTH  CG   HG1   SING  N  N  16  
GTH  CG   HG2   SING  N  N  17  
GTH  CG   HG3   SING  N  N  18  
GTH  C1   O1    SING  N  N  19  
GTH  C1   C5    SING  N  N  20  
GTH  C1   C6    SING  N  N  21  
GTH  C1   H1    SING  N  N  22  
GTH  O1   C2    SING  N  N  23  
GTH  C2   O2    SING  N  N  24  
GTH  C2   C3    SING  N  N  25  
GTH  C2   H2    SING  N  N  26  
GTH  O2   C10   SING  N  N  27  
GTH  C3   O3    SING  N  N  28  
GTH  C3   C4    SING  N  N  29  
GTH  C3   H3    SING  N  N  30  
GTH  O3   HO3   SING  N  N  31  
GTH  C4   O4    SING  N  N  32  
GTH  C4   C5    SING  N  N  33  
GTH  C4   H4    SING  N  N  34  
GTH  O4   HO4   SING  N  N  35  
GTH  C5   O5    SING  N  N  36  
GTH  C5   H5    SING  N  N  37  
GTH  O5   HO5   SING  N  N  38  
GTH  C6   O6    SING  N  N  39  
GTH  C6   H61   SING  N  N  40  
GTH  C6   H62   SING  N  N  41  
GTH  O6   HO6   SING  N  N  42  
GTH  C7   O7    SING  N  N  43  
GTH  C7   C11   SING  N  N  44  
GTH  C7   C12   SING  N  N  45  
GTH  C7   H7    SING  N  N  46  
GTH  O7   C8    SING  N  N  47  
GTH  C8   O8    SING  N  N  48  
GTH  C8   C9    SING  N  N  49  
GTH  C8   H8    SING  N  N  50  
GTH  C9   C10   SING  N  N  51  
GTH  C9   H9    SING  N  N  52  
GTH  C10  C11   SING  N  N  53  
GTH  C10  H10   SING  N  N  54  
GTH  C11  O9    SING  N  N  55  
GTH  C11  H11   SING  N  N  56  
GTH  O9   HO9   SING  N  N  57  
GTH  C12  O10   SING  N  N  58  
GTH  C12  H121  SING  N  N  59  
GTH  C12  H122  SING  N  N  60  
GTH  O10  HOA   SING  N  N  61  
GTH  C13  O11   DOUB  N  N  62  
GTH  C13  C14   SING  N  N  63  
GTH  C14  H141  SING  N  N  64  
GTH  C14  H142  SING  N  N  65  
GTH  C14  H143  SING  N  N  66  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
GTH  SMILES            ACDLabs               10.04  "O=C(O)C(N)C(OC2OC(C(O)C(OC1OC(C(O)C(O)C1O)CO)C2NC(=O)C)CO)C"  
GTH  SMILES_CANONICAL  CACTVS                3.341  "C[C@@H](O[C@@H]1O[C@H](CO)[C@H](O)[C@H](O[C@@H]2O[C@H](CO)[C@H](O)[C@H](O)[C@H]2O)[C@H]1NC(C)=O)[C@H](N)C(O)=O"  
GTH  SMILES            CACTVS                3.341  "C[CH](O[CH]1O[CH](CO)[CH](O)[CH](O[CH]2O[CH](CO)[CH](O)[CH](O)[CH]2O)[CH]1NC(C)=O)[CH](N)C(O)=O"  
GTH  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "C[C@H]([C@@H](C(=O)O)N)O[C@H]1[C@@H]([C@H]([C@H]([C@H](O1)CO)O)O[C@H]2[C@@H]([C@H]([C@H]([C@H](O2)CO)O)O)O)NC(=O)C"  
GTH  SMILES            "OpenEye OEToolkits"  1.5.0  "CC(C(C(=O)O)N)OC1C(C(C(C(O1)CO)O)OC2C(C(C(C(O2)CO)O)O)O)NC(=O)C"  
GTH  InChI             InChI                 1.03   "InChI=1S/C18H32N2O13/c1-5(9(19)16(28)29)30-17-10(20-6(2)23)15(12(25)8(4-22)31-17)33-18-14(27)13(26)11(24)7(3-21)32-18/h5,7-15,17-18,21-22,24-27H,3-4,19H2,1-2H3,(H,20,23)(H,28,29)/t5-,7-,8-,9+,10-,11+,12+,13+,14-,15-,17-,18+/m1/s1"  
GTH  InChIKey          InChI                 1.03   VWNOCGQJSBAAFO-KPCFJFNASA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
GTH  "SYSTEMATIC NAME"  ACDLabs               10.04  "(2S,3R)-3-{[(2R,3R,4R,5R,6R)-3-(acetylamino)-5-hydroxy-6-(hydroxymethyl)-4-{[(2R,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yl]oxy}tetrahydro-2H-pyran-2-yl]oxy}-2-aminobutanoic acid (non-preferred name)"  
GTH  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(2S,3R)-3-[(2R,3R,4R,5R,6R)-3-acetamido-5-hydroxy-6-(hydroxymethyl)-4-[(2R,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-oxan-2-yl]oxy-2-amino-butanoic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
GTH  "Create component"    1999-07-08  RCSB  
GTH  "Modify descriptor"   2011-06-04  RCSB  
GTH  "Obsolete component"  2020-07-03  RCSB  
##
