data_YSD
# 
_chem_comp.id                                    YSD 
_chem_comp.name                                  "(1R,3R,7E,17beta)-17-[(2R)-5-ethyl-5-hydroxyheptan-2-yl]-2-methylidene-9,10-secoestra-5,7-diene-1,3-diol" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C28 H46 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2012-04-23 
_chem_comp.pdbx_modified_date                    2012-05-18 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        430.663 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YSD 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3VRV 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YSD CAB CAB C 0 1 N N N -9.642  22.530 -6.978 7.113  3.189  1.002  CAB YSD 1  
YSD CAK CAK C 0 1 N N N -10.165 21.129 -7.502 5.914  2.359  0.537  CAK YSD 2  
YSD CBD CBD C 0 1 N N N -11.506 20.810 -6.837 6.412  1.104  -0.183 CBD YSD 3  
YSD CAL CAL C 0 1 N N N -11.349 20.530 -5.335 7.353  1.507  -1.320 CAL YSD 4  
YSD CAC CAC C 0 1 N N N -10.279 19.485 -5.074 7.840  0.253  -2.048 CAC YSD 5  
YSD OAH OAH O 0 1 N N N -12.088 19.618 -7.405 7.113  0.270  0.742  OAH YSD 6  
YSD CAS CAS C 0 1 N N N -12.391 22.050 -7.057 5.218  0.338  -0.756 CAS YSD 7  
YSD CAP CAP C 0 1 N N N -13.646 22.069 -6.188 4.278  -0.068 0.381  CAP YSD 8  
YSD CAY CAY C 0 1 N N R -14.729 22.854 -6.963 3.027  -0.727 -0.202 CAY YSD 9  
YSD CAD CAD C 0 1 N N N -15.441 21.970 -7.993 3.415  -2.036 -0.893 CAD YSD 10 
YSD CBC CBC C 0 1 N N R -15.793 23.615 -6.142 2.033  -1.020 0.923  CBC YSD 11 
YSD CAQ CAQ C 0 1 N N N -16.342 22.842 -4.919 1.541  0.304  1.566  CAQ YSD 12 
YSD CAO CAO C 0 1 N N N -16.951 23.915 -4.003 -0.008 0.304  1.436  CAO YSD 13 
YSD CBB CBB C 0 1 N N S -16.791 25.204 -4.770 -0.338 -1.187 1.329  CBB YSD 14 
YSD CBE CBE C 0 1 N N R -15.459 25.022 -5.528 0.780  -1.676 0.365  CBE YSD 15 
YSD CAE CAE C 0 1 N N N -14.236 25.006 -4.588 0.508  -1.132 -1.039 CAE YSD 16 
YSD CAR CAR C 0 1 N N N -15.354 26.189 -6.566 0.719  -3.185 0.323  CAR YSD 17 
YSD CAM CAM C 0 1 N N N -15.528 27.599 -5.911 -0.591 -3.577 -0.381 CAM YSD 18 
YSD CAN CAN C 0 1 N N N -16.720 27.726 -4.917 -1.814 -3.023 0.347  CAN YSD 19 
YSD CAX CAX C 0 1 N N N -16.752 26.486 -3.978 -1.631 -1.544 0.658  CAX YSD 20 
YSD CAJ CAJ C 0 1 N N N -16.871 26.612 -2.558 -2.552 -0.634 0.357  CAJ YSD 21 
YSD CAI CAI C 0 1 N N N -16.738 27.914 -1.953 -3.802 -1.043 -0.301 CAI YSD 22 
YSD CAW CAW C 0 1 N N N -16.551 28.034 -0.550 -4.676 -0.124 -0.698 CAW YSD 23 
YSD CAU CAU C 0 1 N N N -16.321 26.780 0.320  -4.336 1.347  -0.613 CAU YSD 24 
YSD CAT CAT C 0 1 N N N -16.427 29.432 0.044  -6.024 -0.530 -1.247 CAT YSD 25 
YSD CAZ CAZ C 0 1 N N R -17.052 29.585 1.420  -7.117 0.173  -0.432 CAZ YSD 26 
YSD OAF OAF O 0 1 N N N -18.478 29.540 1.327  -7.172 -0.389 0.881  OAF YSD 27 
YSD CAV CAV C 0 1 N N N -16.594 28.409 2.287  -6.780 1.644  -0.342 CAV YSD 28 
YSD CAA CAA C 0 1 N N N -15.895 28.615 3.461  -7.641 2.550  -0.732 CAA YSD 29 
YSD CBA CBA C 0 1 N N R -16.960 27.020 1.735  -5.425 2.054  0.204  CBA YSD 30 
YSD OAG OAG O 0 1 N N N -16.506 26.109 2.632  -5.268 3.470  0.089  OAG YSD 31 
YSD H1  H1  H 0 1 N N N -8.678  22.763 -7.454 7.711  3.478  0.139  H1  YSD 32 
YSD H2  H2  H 0 1 N N N -10.374 23.312 -7.230 6.758  4.083  1.515  H2  YSD 33 
YSD H3  H3  H 0 1 N N N -9.512  22.488 -5.887 7.722  2.596  1.684  H3  YSD 34 
YSD H4  H4  H 0 1 N N N -10.296 21.170 -8.593 5.316  2.069  1.401  H4  YSD 35 
YSD H5  H5  H 0 1 N N N -9.434  20.346 -7.250 5.305  2.952  -0.145 H5  YSD 36 
YSD H6  H6  H 0 1 N N N -11.069 21.463 -4.824 6.821  2.151  -2.021 H6  YSD 37 
YSD H7  H7  H 0 1 N N N -12.308 20.167 -4.937 8.208  2.045  -0.910 H7  YSD 38 
YSD H8  H8  H 0 1 N N N -10.193 19.310 -3.991 8.583  0.532  -2.795 H8  YSD 39 
YSD H9  H9  H 0 1 N N N -10.553 18.546 -5.577 8.288  -0.433 -1.329 H9  YSD 40 
YSD H10 H10 H 0 1 N N N -9.315  19.842 -5.465 6.997  -0.234 -2.538 H10 YSD 41 
YSD H11 H11 H 0 1 N N N -12.918 19.437 -6.980 6.576  -0.024 1.491  H11 YSD 42 
YSD H12 H12 H 0 1 N N N -11.796 22.946 -6.828 4.682  0.975  -1.461 H12 YSD 43 
YSD H13 H13 H 0 1 N N N -12.699 22.074 -8.113 5.572  -0.555 -1.271 H13 YSD 44 
YSD H14 H14 H 0 1 N N N -13.989 21.041 -5.999 4.787  -0.772 1.039  H14 YSD 45 
YSD H15 H15 H 0 1 N N N -13.433 22.566 -5.230 3.991  0.818  0.948  H15 YSD 46 
YSD H16 H16 H 0 1 N N N -14.190 23.619 -7.541 2.567  -0.056 -0.928 H16 YSD 47 
YSD H17 H17 H 0 1 N N N -16.202 22.563 -8.522 4.123  -1.827 -1.695 H17 YSD 48 
YSD H18 H18 H 0 1 N N N -14.707 21.586 -8.717 3.875  -2.707 -0.168 H18 YSD 49 
YSD H19 H19 H 0 1 N N N -15.925 21.126 -7.480 2.523  -2.506 -1.308 H19 YSD 50 
YSD H20 H20 H 0 1 N N N -16.648 23.773 -6.816 2.492  -1.660 1.676  H20 YSD 51 
YSD H21 H21 H 0 1 N N N -17.111 22.121 -5.232 1.829  0.340  2.617  H21 YSD 52 
YSD H22 H22 H 0 1 N N N -15.529 22.310 -4.403 1.962  1.157  1.033  H22 YSD 53 
YSD H23 H23 H 0 1 N N N -18.014 23.706 -3.813 -0.470 0.739  2.322  H23 YSD 54 
YSD H24 H24 H 0 1 N N N -16.410 23.962 -3.047 -0.320 0.837  0.538  H24 YSD 55 
YSD H25 H25 H 0 1 N N N -17.601 25.274 -5.511 -0.263 -1.670 2.303  H25 YSD 56 
YSD H26 H26 H 0 1 N N N -14.335 24.178 -3.870 1.285  -1.478 -1.720 H26 YSD 57 
YSD H27 H27 H 0 1 N N N -13.320 24.869 -5.181 -0.463 -1.487 -1.385 H27 YSD 58 
YSD H28 H28 H 0 1 N N N -14.181 25.959 -4.042 0.507  -0.042 -1.012 H28 YSD 59 
YSD H29 H29 H 0 1 N N N -16.138 26.055 -7.326 1.570  -3.575 -0.236 H29 YSD 60 
YSD H30 H30 H 0 1 N N N -14.366 26.144 -7.047 0.727  -3.584 1.337  H30 YSD 61 
YSD H31 H31 H 0 1 N N N -14.603 27.837 -5.365 -0.577 -3.188 -1.399 H31 YSD 62 
YSD H32 H32 H 0 1 N N N -15.677 28.333 -6.717 -0.663 -4.664 -0.419 H32 YSD 63 
YSD H33 H33 H 0 1 N N N -16.598 28.638 -4.314 -2.695 -3.151 -0.281 H33 YSD 64 
YSD H34 H34 H 0 1 N N N -17.663 27.782 -5.481 -1.955 -3.570 1.279  H34 YSD 65 
YSD H35 H35 H 0 1 N N N -17.058 25.742 -1.946 -2.382 0.405  0.595  H35 YSD 66 
YSD H36 H36 H 0 1 N N N -16.781 28.801 -2.568 -4.010 -2.091 -0.462 H36 YSD 67 
YSD H37 H37 H 0 1 N N N -16.794 25.908 -0.156 -3.371 1.472  -0.121 H37 YSD 68 
YSD H38 H38 H 0 1 N N N -15.242 26.598 0.428  -4.297 1.772  -1.616 H38 YSD 69 
YSD H39 H39 H 0 1 N N N -15.358 29.679 0.122  -6.098 -0.231 -2.293 H39 YSD 70 
YSD H40 H40 H 0 1 N N N -16.919 30.141 -0.638 -6.143 -1.610 -1.164 H40 YSD 71 
YSD H41 H41 H 0 1 N N N -16.717 30.529 1.875  -8.080 0.048  -0.927 H41 YSD 72 
YSD H42 H42 H 0 1 N N N -18.856 29.637 2.193  -7.843 0.010  1.451  H42 YSD 73 
YSD H44 H44 H 0 1 N N N -15.571 27.771 4.052  -8.602 2.249  -1.123 H44 YSD 74 
YSD H45 H45 H 0 1 N N N -15.673 29.620 3.788  -7.391 3.599  -0.663 H45 YSD 75 
YSD H47 H47 H 0 1 N N N -18.054 26.963 1.631  -5.348 1.758  1.250  H47 YSD 76 
YSD H48 H48 H 0 1 N N N -16.904 26.272 3.479  -5.925 3.980  0.582  H48 YSD 77 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YSD CAD CAY SING N N 1  
YSD CAK CAB SING N N 2  
YSD CAK CBD SING N N 3  
YSD OAH CBD SING N N 4  
YSD CAS CBD SING N N 5  
YSD CAS CAP SING N N 6  
YSD CAY CAP SING N N 7  
YSD CAY CBC SING N N 8  
YSD CBD CAL SING N N 9  
YSD CAR CAM SING N N 10 
YSD CAR CBE SING N N 11 
YSD CBC CBE SING N N 12 
YSD CBC CAQ SING N N 13 
YSD CAM CAN SING N N 14 
YSD CBE CBB SING N N 15 
YSD CBE CAE SING N N 16 
YSD CAL CAC SING N N 17 
YSD CAQ CAO SING N N 18 
YSD CAN CAX SING N N 19 
YSD CBB CAO SING N N 20 
YSD CBB CAX SING N N 21 
YSD CAX CAJ DOUB N E 22 
YSD CAJ CAI SING N N 23 
YSD CAI CAW DOUB N N 24 
YSD CAW CAT SING N N 25 
YSD CAW CAU SING N N 26 
YSD CAT CAZ SING N N 27 
YSD CAU CBA SING N N 28 
YSD OAF CAZ SING N N 29 
YSD CAZ CAV SING N N 30 
YSD CBA CAV SING N N 31 
YSD CBA OAG SING N N 32 
YSD CAV CAA DOUB N N 33 
YSD CAB H1  SING N N 34 
YSD CAB H2  SING N N 35 
YSD CAB H3  SING N N 36 
YSD CAK H4  SING N N 37 
YSD CAK H5  SING N N 38 
YSD CAL H6  SING N N 39 
YSD CAL H7  SING N N 40 
YSD CAC H8  SING N N 41 
YSD CAC H9  SING N N 42 
YSD CAC H10 SING N N 43 
YSD OAH H11 SING N N 44 
YSD CAS H12 SING N N 45 
YSD CAS H13 SING N N 46 
YSD CAP H14 SING N N 47 
YSD CAP H15 SING N N 48 
YSD CAY H16 SING N N 49 
YSD CAD H17 SING N N 50 
YSD CAD H18 SING N N 51 
YSD CAD H19 SING N N 52 
YSD CBC H20 SING N N 53 
YSD CAQ H21 SING N N 54 
YSD CAQ H22 SING N N 55 
YSD CAO H23 SING N N 56 
YSD CAO H24 SING N N 57 
YSD CBB H25 SING N N 58 
YSD CAE H26 SING N N 59 
YSD CAE H27 SING N N 60 
YSD CAE H28 SING N N 61 
YSD CAR H29 SING N N 62 
YSD CAR H30 SING N N 63 
YSD CAM H31 SING N N 64 
YSD CAM H32 SING N N 65 
YSD CAN H33 SING N N 66 
YSD CAN H34 SING N N 67 
YSD CAJ H35 SING N N 68 
YSD CAI H36 SING N N 69 
YSD CAU H37 SING N N 70 
YSD CAU H38 SING N N 71 
YSD CAT H39 SING N N 72 
YSD CAT H40 SING N N 73 
YSD CAZ H41 SING N N 74 
YSD OAF H42 SING N N 75 
YSD CAA H44 SING N N 76 
YSD CAA H45 SING N N 77 
YSD CBA H47 SING N N 78 
YSD OAG H48 SING N N 79 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YSD SMILES           ACDLabs              12.01 "OC3C(=C)\C(O)C/C(=C\C=C1/CCCC2(C)C(C(C)CCC(O)(CC)CC)CCC12)C3"                                                                                                                                        
YSD InChI            InChI                1.03  "InChI=1S/C28H46O3/c1-6-28(31,7-2)16-14-19(3)23-12-13-24-22(9-8-15-27(23,24)5)11-10-21-17-25(29)20(4)26(30)18-21/h10-11,19,23-26,29-31H,4,6-9,12-18H2,1-3,5H3/b22-11+/t19-,23-,24+,25-,26-,27-/m1/s1" 
YSD InChIKey         InChI                1.03  CCJKDZZJQKPBID-IHLVXOQFSA-N                                                                                                                                                                           
YSD SMILES_CANONICAL CACTVS               3.370 "CCC(O)(CC)CC[C@@H](C)[C@H]1CC[C@H]2\C(CCC[C@]12C)=C\C=C3C[C@@H](O)C(=C)[C@H](O)C3"                                                                                                                   
YSD SMILES           CACTVS               3.370 "CCC(O)(CC)CC[CH](C)[CH]1CC[CH]2C(CCC[C]12C)=CC=C3C[CH](O)C(=C)[CH](O)C3"                                                                                                                             
YSD SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CCC(CC)(CC[C@@H](C)[C@H]1CC[C@@H]\2[C@@]1(CCC/C2=C\C=C3C[C@H](C(=C)[C@@H](C3)O)O)C)O"                                                                                                                
YSD SMILES           "OpenEye OEToolkits" 1.7.6 "CCC(CC)(CCC(C)C1CCC2C1(CCCC2=CC=C3CC(C(=C)C(C3)O)O)C)O"                                                                                                                                              
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
YSD "SYSTEMATIC NAME" ACDLabs              12.01 "(1R,3R,7E,17beta)-17-[(2R)-5-ethyl-5-hydroxyheptan-2-yl]-2-methylidene-9,10-secoestra-5,7-diene-1,3-diol"                                                                   
YSD "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(1R,3R)-5-[(2E)-2-[(1R,3aS,7aR)-1-[(2R)-5-ethyl-5-oxidanyl-heptan-2-yl]-7a-methyl-2,3,3a,5,6,7-hexahydro-1H-inden-4-ylidene]ethylidene]-2-methylidene-cyclohexane-1,3-diol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YSD "Create component" 2012-04-23 PDBJ 
# 
