data_V2D
#

_chem_comp.id                                   V2D
_chem_comp.name                                 "methyl 2-[(3-hydroxy-2-methylphenoxy)methyl]pyridine-3-carboxylate"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C15 H15 N O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-06-18
_chem_comp.pdbx_modified_date                   2020-11-27
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       273.284
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    V2D
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6XE7
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
V2D  C1   C1   C  0  1  N  N  N  12.848  -12.668  -21.983   2.365   0.324   2.209  C1   V2D   1  
V2D  C2   C2   C  0  1  Y  N  N  12.475  -12.169  -20.599   2.759   0.234   0.757  C2   V2D   2  
V2D  C3   C3   C  0  1  Y  N  N  13.281  -11.223  -19.986   4.076  -0.023   0.410  C3   V2D   3  
V2D  C4   C4   C  0  1  Y  N  N  12.962  -10.752  -18.714   4.436  -0.105  -0.928  C4   V2D   4  
V2D  C5   C5   C  0  1  Y  N  N  11.825  -11.235  -18.062   3.484   0.070  -1.913  C5   V2D   5  
V2D  C6   C6   C  0  1  Y  N  N  11.008  -12.188  -18.672   2.170   0.327  -1.569  C6   V2D   6  
V2D  C7   C7   C  0  1  Y  N  N  11.329  -12.654  -19.933   1.804   0.404  -0.233  C7   V2D   7  
V2D  C10  C8   C  0  1  N  N  N   9.337  -14.043  -19.892  -0.419   0.816  -0.968  C10  V2D   8  
V2D  C11  C9   C  0  1  Y  N  N   8.586  -15.230  -20.424  -1.793   1.081  -0.406  C11  V2D   9  
V2D  C12  C10  C  0  1  Y  N  N   9.266  -16.338  -20.978  -2.590   0.011   0.004  C12  V2D  10  
V2D  C13  C11  C  0  1  Y  N  N   8.516  -17.419  -21.454  -3.861   0.278   0.530  C13  V2D  11  
V2D  C14  C12  C  0  1  Y  N  N   7.115  -17.371  -21.368  -4.270   1.596   0.618  C14  V2D  12  
V2D  O8   O1   O  0  1  N  N  N  14.414  -10.751  -20.655   5.013  -0.195   1.379  O8   V2D  13  
V2D  O9   O2   O  0  1  N  N  N  10.505  -13.611  -20.544   0.511   0.651   0.104  O9   V2D  14  
V2D  C15  C13  C  0  1  Y  N  N   6.514  -16.236  -20.804  -3.420   2.600   0.189  C15  V2D  15  
V2D  N16  N1   N  0  1  Y  N  N   7.242  -15.203  -20.347  -2.228   2.319  -0.302  N16  V2D  16  
V2D  C17  C14  C  0  1  N  N  N  10.786  -16.384  -21.073  -2.102  -1.378  -0.113  C17  V2D  17  
V2D  O18  O3   O  0  1  N  N  N  11.331  -15.994  -22.091  -0.960  -1.593  -0.466  O18  V2D  18  
V2D  O19  O4   O  0  1  N  N  N  11.533  -16.490  -19.915  -2.924  -2.407   0.171  O19  V2D  19  
V2D  C20  C15  C  0  1  N  N  N  12.857  -16.086  -19.941  -2.377  -3.745   0.033  C20  V2D  20  
V2D  H1   H1   H  0  1  N  N  N  13.505  -13.546  -21.892   2.465   1.354   2.550  H1   V2D  21  
V2D  H2   H2   H  0  1  N  N  N  11.936  -12.948  -22.530   1.330   0.001   2.325  H2   V2D  22  
V2D  H3   H3   H  0  1  N  N  N  13.374  -11.872  -22.530   3.014  -0.320   2.802  H3   V2D  23  
V2D  H4   H4   H  0  1  N  N  N  13.591  -10.017  -18.234   5.462  -0.306  -1.199  H4   V2D  24  
V2D  H5   H5   H  0  1  N  N  N  11.576  -10.868  -17.077   3.766   0.006  -2.954  H5   V2D  25  
V2D  H6   H6   H  0  1  N  N  N  10.131  -12.559  -18.162   1.428   0.465  -2.342  H6   V2D  26  
V2D  H7   H7   H  0  1  N  N  N   9.619  -14.282  -18.856  -0.443  -0.091  -1.572  H7   V2D  27  
V2D  H8   H8   H  0  1  N  N  N   8.637  -13.194  -19.895  -0.113   1.658  -1.589  H8   V2D  28  
V2D  H9   H9   H  0  1  N  N  N   9.008  -18.280  -21.882  -4.505  -0.525   0.857  H9   V2D  29  
V2D  H10  H10  H  0  1  N  N  N   6.513  -18.191  -21.729  -5.244   1.840   1.017  H10  V2D  30  
V2D  H11  H11  H  0  1  N  N  N  14.860  -10.113  -20.111   5.117  -1.112   1.667  H11  V2D  31  
V2D  H12  H12  H  0  1  N  N  N   5.437  -16.191  -20.735  -3.737   3.630   0.257  H12  V2D  32  
V2D  H13  H13  H  0  1  N  N  N  13.306  -16.234  -18.948  -1.524  -3.859   0.701  H13  V2D  33  
V2D  H14  H14  H  0  1  N  N  N  13.407  -16.681  -20.685  -3.141  -4.478   0.291  H14  V2D  34  
V2D  H15  H15  H  0  1  N  N  N  12.910  -15.021  -20.212  -2.056  -3.902  -0.997  H15  V2D  35  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
V2D  O18  C17  DOUB  N  N   1  
V2D  C1   C2   SING  N  N   2  
V2D  C13  C14  DOUB  Y  N   3  
V2D  C13  C12  SING  Y  N   4  
V2D  C14  C15  SING  Y  N   5  
V2D  C17  C12  SING  N  N   6  
V2D  C17  O19  SING  N  N   7  
V2D  C12  C11  DOUB  Y  N   8  
V2D  C15  N16  DOUB  Y  N   9  
V2D  O8   C3   SING  N  N  10  
V2D  C2   C3   DOUB  Y  N  11  
V2D  C2   C7   SING  Y  N  12  
V2D  O9   C7   SING  N  N  13  
V2D  O9   C10  SING  N  N  14  
V2D  C11  N16  SING  Y  N  15  
V2D  C11  C10  SING  N  N  16  
V2D  C3   C4   SING  Y  N  17  
V2D  C20  O19  SING  N  N  18  
V2D  C7   C6   DOUB  Y  N  19  
V2D  C4   C5   DOUB  Y  N  20  
V2D  C6   C5   SING  Y  N  21  
V2D  C1   H1   SING  N  N  22  
V2D  C1   H2   SING  N  N  23  
V2D  C1   H3   SING  N  N  24  
V2D  C4   H4   SING  N  N  25  
V2D  C5   H5   SING  N  N  26  
V2D  C6   H6   SING  N  N  27  
V2D  C10  H7   SING  N  N  28  
V2D  C10  H8   SING  N  N  29  
V2D  C13  H9   SING  N  N  30  
V2D  C14  H10  SING  N  N  31  
V2D  O8   H11  SING  N  N  32  
V2D  C15  H12  SING  N  N  33  
V2D  C20  H13  SING  N  N  34  
V2D  C20  H14  SING  N  N  35  
V2D  C20  H15  SING  N  N  36  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
V2D  SMILES            ACDLabs               12.01  "Cc1c(cccc1OCc2ncccc2C(OC)=O)O"  
V2D  InChI             InChI                 1.03   "InChI=1S/C15H15NO4/c1-10-13(17)6-3-7-14(10)20-9-12-11(15(18)19-2)5-4-8-16-12/h3-8,17H,9H2,1-2H3"  
V2D  InChIKey          InChI                 1.03   KGBJIZYSRFDDKC-UHFFFAOYSA-N  
V2D  SMILES_CANONICAL  CACTVS                3.385  "COC(=O)c1cccnc1COc2cccc(O)c2C"  
V2D  SMILES            CACTVS                3.385  "COC(=O)c1cccnc1COc2cccc(O)c2C"  
V2D  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "Cc1c(cccc1OCc2c(cccn2)C(=O)OC)O"  
V2D  SMILES            "OpenEye OEToolkits"  2.0.7  "Cc1c(cccc1OCc2c(cccn2)C(=O)OC)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
V2D  "SYSTEMATIC NAME"  ACDLabs               12.01  "methyl 2-[(3-hydroxy-2-methylphenoxy)methyl]pyridine-3-carboxylate"  
V2D  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "methyl 2-[(2-methyl-3-oxidanyl-phenoxy)methyl]pyridine-3-carboxylate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
V2D  "Create component"  2020-06-18  RCSB  
V2D  "Initial release"   2020-12-02  RCSB  
##
