data_UGD
#

_chem_comp.id                                   UGD
_chem_comp.name                                 "N-(3-{[(2R)-4-oxoazetidin-2-yl]oxy}phenyl)-2-(pyrimidin-5-yl)acetamide"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C15 H14 N4 O3"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-05-18
_chem_comp.pdbx_modified_date                   2020-05-22
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       298.297
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    UGD
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5RGU
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
UGD  N1   N1   N  0  1  Y  N  N   6.326   0.650  17.488  -5.087   2.202  -0.738  N1   UGD   1  
UGD  N3   N2   N  0  1  N  N  N  12.692   4.956  22.124   5.019   0.500  -0.520  N3   UGD   2  
UGD  C4   C1   C  0  1  Y  N  N   5.304   1.392  17.915  -5.599   2.257   0.475  C4   UGD   3  
UGD  C5   C2   C  0  1  Y  N  N   6.919  -0.102  18.421  -4.431   1.128  -1.148  C5   UGD   4  
UGD  C6   C3   C  0  1  Y  N  N  10.962  -0.026  21.969   0.112  -1.949  -0.252  C6   UGD   5  
UGD  C7   C4   C  0  1  Y  N  N  11.999  -0.937  22.137   0.799  -3.092   0.135  C7   UGD   6  
UGD  C8   C5   C  0  1  Y  N  N  13.192  -0.527  22.711   2.120  -3.004   0.531  C8   UGD   7  
UGD  C10  C6   C  0  1  Y  N  N  12.306   1.674  23.003   2.078  -0.634   0.159  C10  UGD   8  
UGD  C13  C7   C  0  1  N  N  N  13.561   5.805  22.701   5.484   1.731  -0.237  C13  UGD   9  
UGD  O2   O1   O  0  1  N  N  N  13.822   6.984  22.482   6.343   2.410  -0.757  O2   UGD  10  
UGD  C12  C8   C  0  1  N  N  N  14.115   4.722  23.613   4.580   1.982   0.941  C12  UGD  11  
UGD  C11  C9   C  0  1  N  N  R  13.372   3.753  22.681   4.073   0.582   0.595  C11  UGD  12  
UGD  O1   O2   O  0  1  N  N  N  12.454   2.959  23.476   2.708   0.570   0.172  O1   UGD  13  
UGD  C9   C10  C  0  1  Y  N  N  13.352   0.778  23.148   2.760  -1.780   0.544  C9   UGD  14  
UGD  C14  C11  C  0  1  Y  N  N  11.113   1.287  22.409   0.753  -0.718  -0.240  C14  UGD  15  
UGD  N2   N3   N  0  1  N  N  N   9.773  -0.498  21.366  -1.224  -2.039  -0.658  N2   UGD  16  
UGD  C    C12  C  0  1  N  N  N   8.655   0.193  21.055  -2.086  -1.044  -0.366  C    UGD  17  
UGD  O    O3   O  0  1  N  N  N   8.608   1.416  20.958  -1.686  -0.034   0.173  O    UGD  18  
UGD  C1   C13  C  0  1  N  N  N   7.434  -0.673  20.823  -3.546  -1.186  -0.711  C1   UGD  19  
UGD  C2   C14  C  0  1  Y  N  N   6.520  -0.135  19.747  -4.286   0.055  -0.284  C2   UGD  20  
UGD  N    N4   N  0  1  Y  N  N   4.834   1.469  19.161  -5.481   1.256   1.324  N    UGD  21  
UGD  C3   C15  C  0  1  Y  N  N   5.461   0.701  20.059  -4.839   0.150   0.984  C3   UGD  22  
UGD  H1   H1   H  0  1  N  N  N  11.890   5.084  21.540   5.224  -0.169  -1.192  H1   UGD  23  
UGD  H2   H2   H  0  1  N  N  N   4.803   1.995  17.173  -6.129   3.147   0.781  H2   UGD  24  
UGD  H3   H3   H  0  1  N  N  N   7.755  -0.718  18.124  -4.014   1.089  -2.144  H3   UGD  25  
UGD  H4   H4   H  0  1  N  N  N  11.875  -1.962  21.821   0.301  -4.051   0.126  H4   UGD  26  
UGD  H5   H5   H  0  1  N  N  N  14.004  -1.231  22.819   2.653  -3.894   0.831  H5   UGD  27  
UGD  H6   H6   H  0  1  N  N  N  13.749   4.749  24.650   5.097   2.049   1.898  H6   UGD  28  
UGD  H7   H7   H  0  1  N  N  N  15.211   4.625  23.614   3.850   2.776   0.786  H7   UGD  29  
UGD  H8   H8   H  0  1  N  N  N  14.015   3.201  21.980   4.273  -0.149   1.378  H8   UGD  30  
UGD  H9   H9   H  0  1  N  N  N  14.282   1.093  23.597   3.792  -1.714   0.855  H9   UGD  31  
UGD  H10  H10  H  0  1  N  N  N  10.309   1.998  22.289   0.221   0.172  -0.540  H10  UGD  32  
UGD  H11  H11  H  0  1  N  N  N   9.758  -1.472  21.140  -1.531  -2.817  -1.149  H11  UGD  33  
UGD  H12  H12  H  0  1  N  N  N   6.867  -0.738  21.763  -3.654  -1.321  -1.787  H12  UGD  34  
UGD  H13  H13  H  0  1  N  N  N   7.769  -1.678  20.527  -3.959  -2.052  -0.193  H13  UGD  35  
UGD  H14  H14  H  0  1  N  N  N   5.123   0.735  21.084  -4.746  -0.666   1.684  H14  UGD  36  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
UGD  N1   C4   DOUB  Y  N   1  
UGD  N1   C5   SING  Y  N   2  
UGD  C4   N    SING  Y  N   3  
UGD  C5   C2   DOUB  Y  N   4  
UGD  N    C3   DOUB  Y  N   5  
UGD  C2   C3   SING  Y  N   6  
UGD  C2   C1   SING  N  N   7  
UGD  C1   C    SING  N  N   8  
UGD  O    C    DOUB  N  N   9  
UGD  C    N2   SING  N  N  10  
UGD  N2   C6   SING  N  N  11  
UGD  C6   C7   DOUB  Y  N  12  
UGD  C6   C14  SING  Y  N  13  
UGD  N3   C11  SING  N  N  14  
UGD  N3   C13  SING  N  N  15  
UGD  C7   C8   SING  Y  N  16  
UGD  C14  C10  DOUB  Y  N  17  
UGD  O2   C13  DOUB  N  N  18  
UGD  C11  O1   SING  N  N  19  
UGD  C11  C12  SING  N  N  20  
UGD  C13  C12  SING  N  N  21  
UGD  C8   C9   DOUB  Y  N  22  
UGD  C10  C9   SING  Y  N  23  
UGD  C10  O1   SING  N  N  24  
UGD  N3   H1   SING  N  N  25  
UGD  C4   H2   SING  N  N  26  
UGD  C5   H3   SING  N  N  27  
UGD  C7   H4   SING  N  N  28  
UGD  C8   H5   SING  N  N  29  
UGD  C12  H6   SING  N  N  30  
UGD  C12  H7   SING  N  N  31  
UGD  C11  H8   SING  N  N  32  
UGD  C9   H9   SING  N  N  33  
UGD  C14  H10  SING  N  N  34  
UGD  N2   H11  SING  N  N  35  
UGD  C1   H12  SING  N  N  36  
UGD  C1   H13  SING  N  N  37  
UGD  C3   H14  SING  N  N  38  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
UGD  SMILES            ACDLabs               12.01  "n1cncc(c1)CC(Nc3cccc(OC2NC(C2)=O)c3)=O"  
UGD  InChI             InChI                 1.03   "InChI=1S/C15H14N4O3/c20-13(4-10-7-16-9-17-8-10)18-11-2-1-3-12(5-11)22-15-6-14(21)19-15/h1-3,5,7-9,15H,4,6H2,(H,18,20)(H,19,21)/t15-/m1/s1"  
UGD  InChIKey          InChI                 1.03   SGVQMOZIVBYLOT-OAHLLOKOSA-N  
UGD  SMILES_CANONICAL  CACTVS                3.385  "O=C1C[C@H](N1)Oc2cccc(NC(=O)Cc3cncnc3)c2"  
UGD  SMILES            CACTVS                3.385  "O=C1C[CH](N1)Oc2cccc(NC(=O)Cc3cncnc3)c2"  
UGD  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1cc(cc(c1)O[C@@H]2CC(=O)N2)NC(=O)Cc3cncnc3"  
UGD  SMILES            "OpenEye OEToolkits"  2.0.7  "c1cc(cc(c1)OC2CC(=O)N2)NC(=O)Cc3cncnc3"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
UGD  "SYSTEMATIC NAME"  ACDLabs               12.01  "N-(3-{[(2R)-4-oxoazetidin-2-yl]oxy}phenyl)-2-(pyrimidin-5-yl)acetamide"  
UGD  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "~{N}-[3-[(2~{R})-4-oxidanylideneazetidin-2-yl]oxyphenyl]-2-pyrimidin-5-yl-ethanamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
UGD  "Create component"  2020-05-18  RCSB  
UGD  "Initial release"   2020-05-27  RCSB  
##
