data_FVD
# 
_chem_comp.id                                    FVD 
_chem_comp.name                                  "6-chloro-1-[(4-fluoro-3,5-dimethylphenyl)methyl]-2-(piperazin-1-yl)-4-(1,2,3,6-tetrahydropyridin-4-yl)-1H-benzimidazole" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C25 H29 Cl F N5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2018-04-20 
_chem_comp.pdbx_modified_date                    2018-09-14 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        453.983 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     FVD 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6D5G 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
FVD N1  N1  N  0 1 Y N N 34.178 28.684 22.826 0.483  -0.176 1.112  N1  FVD 1  
FVD N3  N2  N  0 1 N N N 36.476 26.612 18.834 0.904  -5.369 0.947  N3  FVD 2  
FVD C4  C1  C  0 1 Y N N 32.788 30.090 21.245 2.784  0.457  0.675  C4  FVD 3  
FVD C5  C2  C  0 1 N N N 33.017 28.792 21.966 1.798  0.020  1.727  C5  FVD 4  
FVD C6  C3  C  0 1 Y N N 35.393 28.088 22.586 -0.014 -1.347 0.617  C6  FVD 5  
FVD C7  C4  C  0 1 N N N 36.632 26.459 21.248 0.065  -3.479 -0.364 C7  FVD 6  
FVD C8  C5  C  0 1 N N N 36.404 25.706 19.965 0.883  -4.772 -0.396 C8  FVD 7  
FVD C10 C6  C  0 1 N N N 35.490 28.422 20.147 0.677  -3.149 1.955  C10 FVD 8  
FVD C13 C7  C  0 1 N N N 36.965 28.377 26.604 -3.874 0.224  -0.667 C13 FVD 9  
FVD C15 C8  C  0 1 N N N 39.393 28.025 26.526 -4.898 -0.727 -2.714 C15 FVD 10 
FVD C17 C9  C  0 1 N N N 36.943 28.028 28.049 -5.095 -0.083 0.154  C17 FVD 11 
FVD C20 C10 C  0 1 Y N N 33.193 29.576 24.944 -0.570 2.145  1.227  C20 FVD 12 
FVD C21 C11 C  0 1 Y N N 34.161 28.999 24.154 -0.492 0.792  0.929  C21 FVD 13 
FVD C22 C12 C  0 1 Y N N 33.420 31.261 21.617 3.042  1.802  0.486  C22 FVD 14 
FVD C24 C13 C  0 1 N N N 33.874 33.706 21.351 4.228  3.670  -0.683 C24 FVD 15 
FVD C14 C14 C  0 1 N N N 38.071 28.299 25.905 -3.787 -0.068 -1.947 C14 FVD 16 
FVD N5  N3  N  0 1 N N N 39.356 28.165 27.975 -5.859 -1.341 -1.789 N5  FVD 17 
FVD C16 C15 C  0 1 N N N 38.233 27.466 28.599 -6.281 -0.365 -0.771 C16 FVD 18 
FVD C12 C16 C  0 1 Y N N 35.687 28.813 26.001 -2.728 0.884  -0.012 C12 FVD 19 
FVD C18 C17 C  0 1 Y N N 34.718 29.371 26.802 -2.783 2.240  0.297  C18 FVD 20 
FVD C19 C18 C  0 1 Y N N 33.495 29.759 26.278 -1.709 2.861  0.911  C19 FVD 21 
FVD CL1 CL1 CL 0 0 N N N 32.311 30.474 27.339 -1.794 4.553  1.289  CL1 FVD 22 
FVD C11 C19 C  0 1 Y N N 35.392 28.615 24.654 -1.571 0.147  0.306  C11 FVD 23 
FVD N4  N4  N  0 1 Y N N 36.148 28.065 23.641 -1.222 -1.155 0.147  N4  FVD 24 
FVD N2  N5  N  0 1 N N N 35.773 27.642 21.354 0.656  -2.553 0.612  N2  FVD 25 
FVD C9  C20 C  0 1 N N N 35.379 27.560 18.910 1.495  -4.442 1.923  C9  FVD 26 
FVD C3  C21 C  0 1 Y N N 31.878 30.116 20.210 3.435  -0.488 -0.097 C3  FVD 27 
FVD C2  C22 C  0 1 Y N N 31.609 31.273 19.517 4.345  -0.088 -1.058 C2  FVD 28 
FVD C1  C23 C  0 1 N N N 30.630 31.271 18.384 5.058  -1.118 -1.895 C1  FVD 29 
FVD C25 C24 C  0 1 Y N N 32.269 32.413 19.909 4.604  1.259  -1.248 C25 FVD 30 
FVD F1  F1  F  0 1 N N N 32.014 33.539 19.241 5.493  1.650  -2.187 F1  FVD 31 
FVD C23 C25 C  0 1 Y N N 33.160 32.452 20.961 3.947  2.204  -0.478 C23 FVD 32 
FVD H1  H1  H  0 1 N N N 36.409 26.091 17.983 1.394  -6.251 0.943  H1  FVD 33 
FVD H3  H3  H  0 1 N N N 32.130 28.604 22.589 1.727  0.786  2.499  H3  FVD 34 
FVD H4  H4  H  0 1 N N N 33.102 28.005 21.202 2.133  -0.916 2.173  H4  FVD 35 
FVD H5  H5  H  0 1 N N N 36.420 25.790 22.095 0.072  -3.020 -1.352 H5  FVD 36 
FVD H6  H6  H  0 1 N N N 37.683 26.780 21.289 -0.962 -3.705 -0.075 H6  FVD 37 
FVD H7  H7  H  0 1 N N N 35.410 25.236 19.991 1.902  -4.550 -0.711 H7  FVD 38 
FVD H8  H8  H  0 1 N N N 37.175 24.929 19.858 0.429  -5.472 -1.097 H8  FVD 39 
FVD H9  H9  H  0 1 N N N 36.303 29.148 19.998 1.131  -2.449 2.656  H9  FVD 40 
FVD H10 H10 H  0 1 N N N 34.540 28.958 20.289 -0.342 -3.371 2.270  H10 FVD 41 
FVD H11 H11 H  0 1 N N N 39.696 26.998 26.276 -5.409 0.019  -3.323 H11 FVD 42 
FVD H12 H12 H  0 1 N N N 40.130 28.734 26.120 -4.479 -1.496 -3.362 H12 FVD 43 
FVD H13 H13 H  0 1 N N N 36.701 28.940 28.615 -4.904 -0.957 0.776  H13 FVD 44 
FVD H14 H14 H  0 1 N N N 36.153 27.279 28.205 -5.328 0.771  0.791  H14 FVD 45 
FVD H15 H15 H  0 1 N N N 32.238 29.873 24.537 0.262  2.640  1.707  H15 FVD 46 
FVD H16 H16 H  0 1 N N N 34.128 31.247 22.432 2.536  2.539  1.092  H16 FVD 47 
FVD H17 H17 H  0 1 N N N 33.288 34.240 22.113 3.544  4.070  -1.432 H17 FVD 48 
FVD H18 H18 H  0 1 N N N 34.863 33.452 21.760 4.089  4.202  0.258  H18 FVD 49 
FVD H19 H19 H  0 1 N N N 33.997 34.348 20.466 5.255  3.799  -1.025 H19 FVD 50 
FVD H20 H20 H  0 1 N N N 38.020 28.439 24.835 -2.875 0.177  -2.471 H20 FVD 51 
FVD H21 H21 H  0 1 N N N 40.206 27.797 28.351 -6.654 -1.711 -2.288 H21 FVD 52 
FVD H23 H23 H  0 1 N N N 38.294 26.391 28.372 -7.109 -0.775 -0.192 H23 FVD 53 
FVD H24 H24 H  0 1 N N N 38.265 27.613 29.689 -6.595 0.559  -1.258 H24 FVD 54 
FVD H25 H25 H  0 1 N N N 34.913 29.509 27.855 -3.667 2.811  0.055  H25 FVD 55 
FVD H26 H26 H  0 1 N N N 35.399 28.205 18.019 1.488  -4.902 2.911  H26 FVD 56 
FVD H27 H27 H  0 1 N N N 34.428 27.008 18.941 2.522  -4.216 1.634  H27 FVD 57 
FVD H28 H28 H  0 1 N N N 31.364 29.206 19.937 3.233  -1.538 0.052  H28 FVD 58 
FVD H29 H29 H  0 1 N N N 31.157 31.053 17.444 5.983  -1.413 -1.398 H29 FVD 59 
FVD H30 H30 H  0 1 N N N 29.865 30.501 18.562 4.418  -1.992 -2.019 H30 FVD 60 
FVD H31 H31 H  0 1 N N N 30.148 32.257 18.314 5.289  -0.696 -2.872 H31 FVD 61 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
FVD C1  C2  SING N N 1  
FVD N3  C9  SING N N 2  
FVD N3  C8  SING N N 3  
FVD C9  C10 SING N N 4  
FVD F1  C25 SING N N 5  
FVD C2  C25 DOUB Y N 6  
FVD C2  C3  SING Y N 7  
FVD C25 C23 SING Y N 8  
FVD C8  C7  SING N N 9  
FVD C10 N2  SING N N 10 
FVD C3  C4  DOUB Y N 11 
FVD C23 C24 SING N N 12 
FVD C23 C22 DOUB Y N 13 
FVD C4  C22 SING Y N 14 
FVD C4  C5  SING N N 15 
FVD C7  N2  SING N N 16 
FVD N2  C6  SING N N 17 
FVD C5  N1  SING N N 18 
FVD C6  N1  SING Y N 19 
FVD C6  N4  DOUB Y N 20 
FVD N1  C21 SING Y N 21 
FVD N4  C11 SING Y N 22 
FVD C21 C11 DOUB Y N 23 
FVD C21 C20 SING Y N 24 
FVD C11 C12 SING Y N 25 
FVD C20 C19 DOUB Y N 26 
FVD C14 C15 SING N N 27 
FVD C14 C13 DOUB N N 28 
FVD C12 C13 SING N N 29 
FVD C12 C18 DOUB Y N 30 
FVD C19 C18 SING Y N 31 
FVD C19 CL1 SING N N 32 
FVD C15 N5  SING N N 33 
FVD C13 C17 SING N N 34 
FVD N5  C16 SING N N 35 
FVD C17 C16 SING N N 36 
FVD N3  H1  SING N N 37 
FVD C5  H3  SING N N 38 
FVD C5  H4  SING N N 39 
FVD C7  H5  SING N N 40 
FVD C7  H6  SING N N 41 
FVD C8  H7  SING N N 42 
FVD C8  H8  SING N N 43 
FVD C10 H9  SING N N 44 
FVD C10 H10 SING N N 45 
FVD C15 H11 SING N N 46 
FVD C15 H12 SING N N 47 
FVD C17 H13 SING N N 48 
FVD C17 H14 SING N N 49 
FVD C20 H15 SING N N 50 
FVD C22 H16 SING N N 51 
FVD C24 H17 SING N N 52 
FVD C24 H18 SING N N 53 
FVD C24 H19 SING N N 54 
FVD C14 H20 SING N N 55 
FVD N5  H21 SING N N 56 
FVD C16 H23 SING N N 57 
FVD C16 H24 SING N N 58 
FVD C18 H25 SING N N 59 
FVD C9  H26 SING N N 60 
FVD C9  H27 SING N N 61 
FVD C3  H28 SING N N 62 
FVD C1  H29 SING N N 63 
FVD C1  H30 SING N N 64 
FVD C1  H31 SING N N 65 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
FVD SMILES           ACDLabs              12.01 "n3(c2cc(cc(C=1CCNCC=1)c2nc3N4CCNCC4)Cl)Cc5cc(C)c(c(c5)C)F"                                                                                                   
FVD InChI            InChI                1.03  "InChI=1S/C25H29ClFN5/c1-16-11-18(12-17(2)23(16)27)15-32-22-14-20(26)13-21(19-3-5-28-6-4-19)24(22)30-25(32)31-9-7-29-8-10-31/h3,11-14,28-29H,4-10,15H2,1-2H3" 
FVD InChIKey         InChI                1.03  AICGXPKTEXWHDK-UHFFFAOYSA-N                                                                                                                                   
FVD SMILES_CANONICAL CACTVS               3.385 "Cc1cc(Cn2c3cc(Cl)cc(C4=CCNCC4)c3nc2N5CCNCC5)cc(C)c1F"                                                                                                        
FVD SMILES           CACTVS               3.385 "Cc1cc(Cn2c3cc(Cl)cc(C4=CCNCC4)c3nc2N5CCNCC5)cc(C)c1F"                                                                                                        
FVD SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "Cc1cc(cc(c1F)C)Cn2c3cc(cc(c3nc2N4CCNCC4)C5=CCNCC5)Cl"                                                                                                        
FVD SMILES           "OpenEye OEToolkits" 2.0.6 "Cc1cc(cc(c1F)C)Cn2c3cc(cc(c3nc2N4CCNCC4)C5=CCNCC5)Cl"                                                                                                        
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
FVD "SYSTEMATIC NAME" ACDLabs              12.01 "6-chloro-1-[(4-fluoro-3,5-dimethylphenyl)methyl]-2-(piperazin-1-yl)-4-(1,2,3,6-tetrahydropyridin-4-yl)-1H-benzimidazole"  
FVD "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "6-chloranyl-1-[(4-fluoranyl-3,5-dimethyl-phenyl)methyl]-2-piperazin-1-yl-4-(1,2,3,6-tetrahydropyridin-4-yl)benzimidazole" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
FVD "Create component" 2018-04-20 RCSB 
FVD "Initial release"  2018-09-19 RCSB 
# 
