data_VMC
#

_chem_comp.id                                   VMC
_chem_comp.name                                 "2-methoxy-4-(1-{2-[(2S)-1-methylpyrrolidin-2-yl]ethyl}-4-phenyl-1H-imidazol-5-yl)phenol"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C23 H27 N3 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-09-06
_chem_comp.pdbx_modified_date                   2020-03-13
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       377.479
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    VMC
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6U77
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
VMC  O26  O1   O  0  1  N  N  N  -22.349  -15.643  -27.864   0.252   4.374  -0.680  O26  VMC   1  
VMC  C22  C1   C  0  1  Y  N  N  -22.103  -16.584  -26.906   0.312   3.037  -0.439  C22  VMC   2  
VMC  C21  C2   C  0  1  Y  N  N  -21.144  -17.555  -27.216  -0.564   2.178  -1.085  C21  VMC   3  
VMC  C20  C3   C  0  1  Y  N  N  -20.819  -18.552  -26.302  -0.507   0.821  -0.843  C20  VMC   4  
VMC  C23  C4   C  0  1  Y  N  N  -22.745  -16.603  -25.643   1.258   2.534   0.452  C23  VMC   5  
VMC  O27  O2   O  0  1  N  N  N  -23.711  -15.704  -25.201   2.119   3.379   1.079  O27  VMC   6  
VMC  C28  C5   C  0  1  N  N  N  -24.002  -14.377  -25.668   3.062   2.794   1.980  C28  VMC   7  
VMC  C24  C6   C  0  1  Y  N  N  -22.405  -17.620  -24.737   1.320   1.175   0.699  C24  VMC   8  
VMC  C19  C7   C  0  1  Y  N  N  -21.439  -18.577  -25.057   0.434   0.310   0.053  C19  VMC   9  
VMC  C9   C8   C  0  1  Y  N  N  -21.106  -19.661  -24.094   0.495  -1.143   0.313  C9   VMC  10  
VMC  C10  C9   C  0  1  Y  N  N  -20.103  -19.703  -22.991   1.596  -1.966   0.164  C10  VMC  11  
VMC  C13  C10  C  0  1  Y  N  N  -19.126  -18.673  -22.530   2.944  -1.553  -0.290  C13  VMC  12  
VMC  C18  C11  C  0  1  Y  N  N  -18.369  -17.932  -23.443   3.084  -0.547  -1.245  C18  VMC  13  
VMC  C17  C12  C  0  1  Y  N  N  -17.445  -16.986  -22.979   4.343  -0.167  -1.664  C17  VMC  14  
VMC  C16  C13  C  0  1  Y  N  N  -17.268  -16.783  -21.608   5.465  -0.781  -1.138  C16  VMC  15  
VMC  C15  C14  C  0  1  Y  N  N  -18.016  -17.532  -20.696   5.333  -1.781  -0.190  C15  VMC  16  
VMC  C14  C15  C  0  1  Y  N  N  -18.940  -18.476  -21.155   4.080  -2.165   0.241  C14  VMC  17  
VMC  N11  N1   N  0  1  Y  N  N  -20.225  -20.927  -22.433   1.218  -3.212   0.507  N11  VMC  18  
VMC  C12  C16  C  0  1  Y  N  N  -21.190  -21.606  -23.093  -0.038  -3.208   0.855  C12  VMC  19  
VMC  N8   N2   N  0  1  Y  N  N  -21.725  -20.850  -24.080  -0.528  -1.946   0.758  N8   VMC  20  
VMC  C7   C17  C  0  1  N  N  N  -22.795  -21.280  -25.000  -1.896  -1.520   1.065  C7   VMC  21  
VMC  C6   C18  C  0  1  N  N  N  -24.164  -20.624  -24.784  -2.775  -1.693  -0.175  C6   VMC  22  
VMC  C3   C19  C  0  1  N  N  S  -24.568  -20.375  -23.329  -4.175  -1.146   0.112  C3   VMC  23  
VMC  N2   N3   N  0  1  N  N  N  -25.959  -19.867  -23.239  -4.114   0.315   0.303  N2   VMC  24  
VMC  C25  C20  C  0  1  N  N  N  -26.112  -18.421  -23.519  -4.578   0.690   1.645  C25  VMC  25  
VMC  C4   C21  C  0  1  N  N  N  -24.557  -21.656  -22.497  -5.100  -1.411  -1.095  C4   VMC  26  
VMC  C5   C22  C  0  1  N  N  N  -25.752  -21.566  -21.561  -5.959  -0.121  -1.166  C5   VMC  27  
VMC  C1   C23  C  0  1  N  N  N  -26.455  -20.258  -21.901  -4.936   0.961  -0.742  C1   VMC  28  
VMC  H1   H1   H  0  1  N  N  N  -23.011  -15.038  -27.551   0.811   4.667  -1.414  H1   VMC  29  
VMC  H2   H2   H  0  1  N  N  N  -20.650  -17.530  -28.176  -1.292   2.572  -1.778  H2   VMC  30  
VMC  H3   H3   H  0  1  N  N  N  -20.088  -19.304  -26.558  -1.191   0.154  -1.347  H3   VMC  31  
VMC  H4   H4   H  0  1  N  N  N  -24.835  -13.957  -25.085   3.686   3.576   2.411  H4   VMC  32  
VMC  H5   H5   H  0  1  N  N  N  -23.112  -13.742  -25.546   2.529   2.274   2.776  H5   VMC  33  
VMC  H6   H6   H  0  1  N  N  N  -24.282  -14.416  -26.731   3.689   2.085   1.439  H6   VMC  34  
VMC  H7   H7   H  0  1  N  N  N  -22.898  -17.663  -23.777   2.052   0.783   1.389  H7   VMC  35  
VMC  H8   H8   H  0  1  N  N  N  -18.496  -18.089  -24.504   2.209  -0.066  -1.657  H8   VMC  36  
VMC  H9   H9   H  0  1  N  N  N  -16.866  -16.410  -23.686   4.452   0.612  -2.404  H9   VMC  37  
VMC  H10  H10  H  0  1  N  N  N  -16.557  -16.051  -21.255   6.448  -0.480  -1.468  H10  VMC  38  
VMC  H11  H11  H  0  1  N  N  N  -17.880  -17.382  -19.635   6.212  -2.257   0.217  H11  VMC  39  
VMC  H12  H12  H  0  1  N  N  N  -19.513  -19.056  -20.447   3.978  -2.942   0.985  H12  VMC  40  
VMC  H13  H13  H  0  1  N  N  N  -21.493  -22.617  -22.863  -0.599  -4.072   1.177  H13  VMC  41  
VMC  H14  H14  H  0  1  N  N  N  -22.920  -22.367  -24.888  -2.292  -2.128   1.878  H14  VMC  42  
VMC  H15  H15  H  0  1  N  N  N  -22.470  -21.052  -26.026  -1.891  -0.472   1.364  H15  VMC  43  
VMC  H16  H16  H  0  1  N  N  N  -24.157  -19.654  -25.302  -2.336  -1.147  -1.010  H16  VMC  44  
VMC  H17  H17  H  0  1  N  N  N  -24.925  -21.276  -25.237  -2.843  -2.751  -0.428  H17  VMC  45  
VMC  H18  H18  H  0  1  N  N  N  -23.876  -19.647  -22.881  -4.582  -1.620   1.005  H18  VMC  46  
VMC  H20  H20  H  0  1  N  N  N  -27.172  -18.140  -23.428  -3.946   0.213   2.395  H20  VMC  47  
VMC  H21  H21  H  0  1  N  N  N  -25.516  -17.843  -22.797  -4.522   1.773   1.760  H21  VMC  48  
VMC  H22  H22  H  0  1  N  N  N  -25.762  -18.206  -24.539  -5.609   0.363   1.778  H22  VMC  49  
VMC  H23  H23  H  0  1  N  N  N  -24.650  -22.536  -23.151  -4.516  -1.535  -2.007  H23  VMC  50  
VMC  H24  H24  H  0  1  N  N  N  -23.624  -21.727  -21.918  -5.727  -2.283  -0.915  H24  VMC  51  
VMC  H25  H25  H  0  1  N  N  N  -26.429  -22.417  -21.723  -6.316   0.055  -2.181  H25  VMC  52  
VMC  H26  H26  H  0  1  N  N  N  -25.417  -21.559  -20.513  -6.792  -0.168  -0.464  H26  VMC  53  
VMC  H27  H27  H  0  1  N  N  N  -26.205  -19.485  -21.159  -5.451   1.832  -0.335  H27  VMC  54  
VMC  H28  H28  H  0  1  N  N  N  -27.545  -20.404  -21.925  -4.314   1.249  -1.590  H28  VMC  55  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
VMC  O26  C22  SING  N  N   1  
VMC  C21  C22  DOUB  Y  N   2  
VMC  C21  C20  SING  Y  N   3  
VMC  C22  C23  SING  Y  N   4  
VMC  C20  C19  DOUB  Y  N   5  
VMC  C28  O27  SING  N  N   6  
VMC  C23  O27  SING  N  N   7  
VMC  C23  C24  DOUB  Y  N   8  
VMC  C19  C24  SING  Y  N   9  
VMC  C19  C9   SING  N  N  10  
VMC  C7   C6   SING  N  N  11  
VMC  C7   N8   SING  N  N  12  
VMC  C6   C3   SING  N  N  13  
VMC  C9   N8   SING  Y  N  14  
VMC  C9   C10  DOUB  Y  N  15  
VMC  N8   C12  SING  Y  N  16  
VMC  C25  N2   SING  N  N  17  
VMC  C18  C17  DOUB  Y  N  18  
VMC  C18  C13  SING  Y  N  19  
VMC  C3   N2   SING  N  N  20  
VMC  C3   C4   SING  N  N  21  
VMC  N2   C1   SING  N  N  22  
VMC  C12  N11  DOUB  Y  N  23  
VMC  C10  C13  SING  N  N  24  
VMC  C10  N11  SING  Y  N  25  
VMC  C17  C16  SING  Y  N  26  
VMC  C13  C14  DOUB  Y  N  27  
VMC  C4   C5   SING  N  N  28  
VMC  C1   C5   SING  N  N  29  
VMC  C16  C15  DOUB  Y  N  30  
VMC  C14  C15  SING  Y  N  31  
VMC  O26  H1   SING  N  N  32  
VMC  C21  H2   SING  N  N  33  
VMC  C20  H3   SING  N  N  34  
VMC  C28  H4   SING  N  N  35  
VMC  C28  H5   SING  N  N  36  
VMC  C28  H6   SING  N  N  37  
VMC  C24  H7   SING  N  N  38  
VMC  C18  H8   SING  N  N  39  
VMC  C17  H9   SING  N  N  40  
VMC  C16  H10  SING  N  N  41  
VMC  C15  H11  SING  N  N  42  
VMC  C14  H12  SING  N  N  43  
VMC  C12  H13  SING  N  N  44  
VMC  C7   H14  SING  N  N  45  
VMC  C7   H15  SING  N  N  46  
VMC  C6   H16  SING  N  N  47  
VMC  C6   H17  SING  N  N  48  
VMC  C3   H18  SING  N  N  49  
VMC  C25  H20  SING  N  N  50  
VMC  C25  H21  SING  N  N  51  
VMC  C25  H22  SING  N  N  52  
VMC  C4   H23  SING  N  N  53  
VMC  C4   H24  SING  N  N  54  
VMC  C5   H25  SING  N  N  55  
VMC  C5   H26  SING  N  N  56  
VMC  C1   H27  SING  N  N  57  
VMC  C1   H28  SING  N  N  58  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
VMC  SMILES            ACDLabs               12.01  "Oc1c(OC)cc(cc1)c2n(cnc2c3ccccc3)CCC4N(CCC4)C"  
VMC  InChI             InChI                 1.03   "InChI=1S/C23H27N3O2/c1-25-13-6-9-19(25)12-14-26-16-24-22(17-7-4-3-5-8-17)23(26)18-10-11-20(27)21(15-18)28-2/h3-5,7-8,10-11,15-16,19,27H,6,9,12-14H2,1-2H3/t19-/m0/s1"  
VMC  InChIKey          InChI                 1.03   YGPHAIXUDLLWHC-IBGZPJMESA-N  
VMC  SMILES_CANONICAL  CACTVS                3.385  "COc1cc(ccc1O)c2n(CC[C@@H]3CCCN3C)cnc2c4ccccc4"  
VMC  SMILES            CACTVS                3.385  "COc1cc(ccc1O)c2n(CC[CH]3CCCN3C)cnc2c4ccccc4"  
VMC  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CN1CCC[C@H]1CCn2cnc(c2c3ccc(c(c3)OC)O)c4ccccc4"  
VMC  SMILES            "OpenEye OEToolkits"  2.0.7  "CN1CCCC1CCn2cnc(c2c3ccc(c(c3)OC)O)c4ccccc4"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
VMC  "SYSTEMATIC NAME"  ACDLabs               12.01  "2-methoxy-4-(1-{2-[(2S)-1-methylpyrrolidin-2-yl]ethyl}-4-phenyl-1H-imidazol-5-yl)phenol"  
VMC  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "2-methoxy-4-[3-[2-[(2~{S})-1-methylpyrrolidin-2-yl]ethyl]-5-phenyl-imidazol-4-yl]phenol"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
VMC  "Create component"  2019-09-06  RCSB  
VMC  "Initial release"   2020-03-18  RCSB  
##
