data_VKC
# 
_chem_comp.id                                    VKC 
_chem_comp.name                                  "(2-hydroxyethoxy)acetic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C4 H8 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2013-10-29 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        120.104 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     VKC 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4CCW 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
VKC C    C    C 0 1 N N N Y N Y 35.593 8.718  13.699 -1.980 -0.126 0.000  C    VKC 1  
VKC O    O    O 0 1 N N N Y N Y 35.326 9.265  12.608 -1.778 -1.267 0.344  O    VKC 2  
VKC CA   CA   C 0 1 N N N N N N 35.248 7.258  13.883 -0.826 0.832  -0.149 CA   VKC 3  
VKC CD   CD   C 0 1 N N N N N N 32.754 5.062  12.526 2.798  0.166  0.423  CD   VKC 4  
VKC CG   CG   C 0 1 N N N N N N 34.199 5.559  12.580 1.557  0.984  0.060  CG   VKC 5  
VKC OAD  OAD  O 0 1 N N N N N N 34.192 6.918  12.990 0.394  0.160  0.170  OAD  VKC 6  
VKC OE1  OE1  O 0 1 N N N N N N 32.683 3.681  12.915 2.980  -0.875 -0.539 OE1  VKC 7  
VKC OXT  OXT  O 0 1 N Y N Y N Y 36.131 9.339  14.641 -3.232 0.286  -0.255 OXT  VKC 8  
VKC HA   HA   H 0 1 N N N N N N 36.131 6.639  13.664 -0.785 1.193  -1.176 HA   VKC 9  
VKC HAA  HAA  H 0 1 N N N N N N 34.926 7.082  14.920 -0.965 1.675  0.528  HAA  VKC 10 
VKC HD   HD   H 0 1 N N N N N N 32.138 5.663  13.211 3.673  0.816  0.425  HD   VKC 11 
VKC HDA  HDA  H 0 1 N N N N N N 32.372 5.169  11.500 2.668  -0.272 1.412  HDA  VKC 12 
VKC HG   HG   H 0 1 N N N N N N 34.772 4.957  13.300 1.468  1.831  0.741  HG   VKC 13 
VKC HGA  HGA  H 0 1 N N N N N N 34.658 5.474  11.584 1.648  1.349  -0.963 HGA  VKC 14 
VKC HOE1 HOE1 H 0 0 N N N N N N 31.781 3.387  12.877 3.750  -1.434 -0.372 HOE1 VKC 15 
VKC HXT  HXT  H 0 1 N Y N Y N Y 36.284 10.240 14.381 -3.939 -0.366 -0.149 HXT  VKC 16 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
VKC C   O    DOUB N N 1  
VKC C   CA   SING N N 2  
VKC C   OXT  SING N N 3  
VKC CA  OAD  SING N N 4  
VKC CD  CG   SING N N 5  
VKC CD  OE1  SING N N 6  
VKC CG  OAD  SING N N 7  
VKC CA  HA   SING N N 8  
VKC CA  HAA  SING N N 9  
VKC CD  HD   SING N N 10 
VKC CD  HDA  SING N N 11 
VKC CG  HG   SING N N 12 
VKC CG  HGA  SING N N 13 
VKC OE1 HOE1 SING N N 14 
VKC OXT HXT  SING N N 15 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
VKC SMILES           ACDLabs              12.01 "[O-]C(=O)COCCO"                                         
VKC InChI            InChI                1.03  "InChI=1S/C4H8O4/c5-1-2-8-3-4(6)7/h5H,1-3H2,(H,6,7)/p-1" 
VKC InChIKey         InChI                1.03  VDNMIIDPBBCMTM-UHFFFAOYSA-M                              
VKC SMILES_CANONICAL CACTVS               3.385 "OCCOCC(O)=O"                                            
VKC SMILES           CACTVS               3.385 "OCCOCC(O)=O"                                            
VKC SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C(COCC(=O)O)O"                                          
VKC SMILES           "OpenEye OEToolkits" 1.7.6 "C(COCC(=O)O)O"                                          
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
VKC "SYSTEMATIC NAME" ACDLabs              12.01 "(2-hydroxyethoxy)acetate"           
VKC "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "2-(2-hydroxyethyloxy)ethanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
VKC "Create component" 2013-10-29 EBI  
VKC "Initial release"  2014-01-22 RCSB 
VKC "Modify backbone"  2024-09-25 PDBE 
VKC "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            VKC 
_pdbx_chem_comp_pcm.modified_residue_id                ? 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Non-standard residue" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain and backbone" 
_pdbx_chem_comp_pcm.polypeptide_position               N-terminal 
_pdbx_chem_comp_pcm.comp_id_linking_atom               ? 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   ? 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
