data_G2C
# 
_chem_comp.id                                    G2C 
_chem_comp.name                                  "2'-deoxy-5'-O-[(S)-{[(R)-[dichloro(phosphono)methyl](hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]guanosine" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C11 H16 Cl2 N5 O12 P3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2009-09-11 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        574.098 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     G2C 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        ? 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
G2C N1     N1     N  0 1 N N N 2.010  3.247  -0.130 -8.151 2.267  0.113  N1     G2C 1  
G2C C2     C2     C  0 1 N N N 2.303  1.917  -0.233 -7.720 1.616  1.230  C2     G2C 2  
G2C N2     N2     N  0 1 N N N 2.691  1.380  -1.455 -8.443 1.732  2.390  N2     G2C 3  
G2C N3     N3     N  0 1 N N N 2.215  1.098  0.851  -6.631 0.880  1.228  N3     G2C 4  
G2C C4     C4     C  0 1 Y N N 1.831  1.616  2.042  -5.894 0.738  0.120  C4     G2C 5  
G2C C5     C5     C  0 1 Y N N 1.513  2.964  2.174  -6.284 1.382  -1.060 C5     G2C 6  
G2C C6     C6     C  0 1 N N N 1.607  3.800  1.049  -7.458 2.171  -1.044 C6     G2C 7  
G2C O6     O6     O  0 1 N N N 1.331  5.018  1.116  -7.836 2.749  -2.049 O6     G2C 8  
G2C N7     N7     N  0 1 Y N N 1.156  3.208  3.441  -5.370 1.069  -2.010 N7     G2C 9  
G2C C8     C8     C  0 1 Y N N 1.264  2.019  4.064  -4.463 0.291  -1.496 C8     G2C 10 
G2C N9     N9     N  0 1 Y N N 1.682  1.032  3.242  -4.745 0.058  -0.181 N9     G2C 11 
G2C PA     PA     P  0 1 N N N 2.366  1.994  8.070  1.618  -2.002 -0.628 PA     G2C 12 
G2C PB     PB     P  0 1 N N N -0.336 2.287  8.001  4.012  -0.255 -0.622 PB     G2C 13 
G2C PG     PG     P  0 1 N N N -3.148 2.720  8.441  6.186  1.699  -0.058 PG     G2C 14 
G2C "C1'"  "C1'"  C  0 1 N N R 1.916  -0.351 3.571  -3.960 -0.768 0.740  "C1'"  G2C 15 
G2C O1A    O1A    O  0 1 N N N 2.790  3.138  7.237  1.451  -1.830 -2.089 O1A    G2C 16 
G2C O1B    O1B    O  0 1 N N N -0.671 0.902  7.610  3.765  0.397  -1.927 O1B    G2C 17 
G2C CL1B   CL1B   CL 0 0 N N N -1.439 2.112  10.635 3.405  2.286  0.771  CL1B   G2C 18 
G2C O1G    O1G    O  0 1 N N N -4.141 3.415  9.345  6.733  2.791  0.992  O1G    G2C 19 
G2C "C2'"  "C2'"  C  0 1 N N N 3.390  -0.782 3.377  -4.543 -2.194 0.790  "C2'"  G2C 20 
G2C O2A    O2A    O  0 1 N N N 3.362  1.782  9.186  2.205  -3.470 -0.324 O2A    G2C 21 
G2C O2B    O2B    O  0 1 N N N -0.277 3.168  6.772  5.108  -1.421 -0.804 O2B    G2C 22 
G2C CL2B   CL2B   CL 0 0 N N N -1.227 4.626  9.355  4.933  0.186  2.157  CL2B   G2C 23 
G2C O2G    O2G    O  0 1 N N N -3.498 1.250  8.390  7.281  0.534  -0.240 O2G    G2C 24 
G2C "C3'"  "C3'"  C  0 1 N N S 3.711  -1.600 4.636  -3.366 -3.100 0.352  "C3'"  G2C 25 
G2C "O3'"  "O3'"  O  0 1 N N N 3.458  -2.990 4.416  -3.313 -4.286 1.148  "O3'"  G2C 26 
G2C O3A    O3A    O  0 1 N N N 1.014  2.296  8.700  2.640  -0.890 -0.070 O3A    G2C 27 
G2C C3B    C3B    C  0 1 N N N -1.546 2.915  9.070  4.632  0.980  0.567  C3B    G2C 28 
G2C O3G    O3G    O  0 1 N N N -3.245 3.297  7.084  5.938  2.352  -1.363 O3G    G2C 29 
G2C "C4'"  "C4'"  C  0 1 N N R 2.727  -1.017 5.674  -2.139 -2.194 0.627  "C4'"  G2C 30 
G2C "O4'"  "O4'"  O  0 1 N N N 1.549  -0.680 4.925  -2.607 -0.876 0.268  "O4'"  G2C 31 
G2C "C5'"  "C5'"  C  0 1 N N N 3.260  0.218  6.455  -0.958 -2.605 -0.255 "C5'"  G2C 32 
G2C "O5'"  "O5'"  O  0 1 N N N 2.290  0.724  7.233  0.191  -1.833 0.098  "O5'"  G2C 33 
G2C HN1    HN1    H  0 1 N N N 2.093  3.829  -0.939 -8.961 2.799  0.147  HN1    G2C 34 
G2C HN2    HN2    H  0 1 N N N 2.901  0.405  -1.529 -9.250 2.271  2.407  HN2    G2C 35 
G2C HN2A   HN2A   H  0 0 N N N 2.760  1.969  -2.260 -8.149 1.275  3.193  HN2A   G2C 36 
G2C H8     H8     H  0 1 N N N 1.040  1.870  5.110  -3.614 -0.111 -2.030 H8     G2C 37 
G2C "H1'"  "H1'"  H  0 1 N N N 1.272  -0.896 2.866  -3.974 -0.327 1.737  "H1'"  G2C 38 
G2C "H2'"  "H2'"  H  0 1 N N N 3.513  -1.386 2.466  -4.858 -2.441 1.804  "H2'"  G2C 39 
G2C "H2'A" "H2'A" H  0 0 N N N 4.053  0.091  3.288  -5.377 -2.290 0.096  "H2'A" G2C 40 
G2C "H3'"  "H3'"  H  0 1 N N N 4.764  -1.536 4.947  -3.439 -3.347 -0.707 "H3'"  G2C 41 
G2C "HO3'" "HO3'" H  0 0 N N N 3.662  -3.478 5.205  -4.101 -4.842 1.079  "HO3'" G2C 42 
G2C "H4'"  "H4'"  H  0 1 N N N 2.545  -1.761 6.464  -1.863 -2.230 1.681  "H4'"  G2C 43 
G2C "H5'"  "H5'"  H  0 1 N N N 4.108  -0.089 7.085  -0.745 -3.663 -0.107 "H5'"  G2C 44 
G2C "H5'A" "H5'A" H  0 0 N N N 3.589  0.986  5.739  -1.207 -2.427 -1.301 "H5'A" G2C 45 
G2C H13    H13    H  0 1 N N N -4.615 4.073  8.850  7.559  3.215  0.724  H13    G2C 46 
G2C H14    H14    H  0 1 N N N 4.055  2.429  9.120  2.340  -3.653 0.615  H14    G2C 47 
G2C H15    H15    H  0 1 N N N -0.468 2.648  6.000  5.320  -1.892 0.013  H15    G2C 48 
G2C H16    H16    H  0 1 N N N -3.707 1.005  7.496  7.493  0.062  0.577  H16    G2C 49 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
G2C N1    C2     SING N N 1  
G2C N1    C6     SING N N 2  
G2C N1    HN1    SING N N 3  
G2C C2    N2     SING N N 4  
G2C C2    N3     DOUB N N 5  
G2C N2    HN2    SING N N 6  
G2C N2    HN2A   SING N N 7  
G2C N3    C4     SING N N 8  
G2C C4    C5     DOUB Y N 9  
G2C C4    N9     SING Y N 10 
G2C C5    C6     SING N N 11 
G2C C5    N7     SING Y N 12 
G2C C6    O6     DOUB N N 13 
G2C N7    C8     DOUB Y N 14 
G2C C8    N9     SING Y N 15 
G2C C8    H8     SING N N 16 
G2C N9    "C1'"  SING N N 17 
G2C PA    O1A    DOUB N N 18 
G2C PA    O2A    SING N N 19 
G2C PA    O3A    SING N N 20 
G2C PA    "O5'"  SING N N 21 
G2C PB    O1B    DOUB N N 22 
G2C PB    O2B    SING N N 23 
G2C PB    O3A    SING N N 24 
G2C PB    C3B    SING N N 25 
G2C PG    O1G    SING N N 26 
G2C PG    O2G    SING N N 27 
G2C PG    C3B    SING N N 28 
G2C PG    O3G    DOUB N N 29 
G2C "C1'" "C2'"  SING N N 30 
G2C "C1'" "O4'"  SING N N 31 
G2C "C1'" "H1'"  SING N N 32 
G2C CL1B  C3B    SING N N 33 
G2C "C2'" "C3'"  SING N N 34 
G2C "C2'" "H2'"  SING N N 35 
G2C "C2'" "H2'A" SING N N 36 
G2C CL2B  C3B    SING N N 37 
G2C "C3'" "O3'"  SING N N 38 
G2C "C3'" "C4'"  SING N N 39 
G2C "C3'" "H3'"  SING N N 40 
G2C "O3'" "HO3'" SING N N 41 
G2C "C4'" "O4'"  SING N N 42 
G2C "C4'" "C5'"  SING N N 43 
G2C "C4'" "H4'"  SING N N 44 
G2C "C5'" "O5'"  SING N N 45 
G2C "C5'" "H5'"  SING N N 46 
G2C "C5'" "H5'A" SING N N 47 
G2C O1G   H13    SING N N 48 
G2C O2A   H14    SING N N 49 
G2C O2B   H15    SING N N 50 
G2C O2G   H16    SING N N 51 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
G2C SMILES           ACDLabs              11.02 "O=P(O)(O)C(Cl)(Cl)P(=O)(O)OP(=O)(O)OCC3OC(n2cnc1c2N=C(N)NC1=O)CC3O"                                                                                                                                         
G2C SMILES_CANONICAL CACTVS               3.352 "NC1=Nc2n(cnc2C(=O)N1)[C@H]3C[C@H](O)[C@@H](CO[P](O)(=O)O[P](O)(=O)C(Cl)(Cl)[P](O)(O)=O)O3"                                                                                                                  
G2C SMILES           CACTVS               3.352 "NC1=Nc2n(cnc2C(=O)N1)[CH]3C[CH](O)[CH](CO[P](O)(=O)O[P](O)(=O)C(Cl)(Cl)[P](O)(O)=O)O3"                                                                                                                      
G2C SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "c1nc2c(n1[C@H]3C[C@@H]([C@H](O3)CO[P@](=O)(O)O[P@@](=O)(C(P(=O)(O)O)(Cl)Cl)O)O)N=C(NC2=O)N"                                                                                                                 
G2C SMILES           "OpenEye OEToolkits" 1.7.0 "c1nc2c(n1C3CC(C(O3)COP(=O)(O)OP(=O)(C(P(=O)(O)O)(Cl)Cl)O)O)N=C(NC2=O)N"                                                                                                                                     
G2C InChI            InChI                1.03  "InChI=1S/C11H16Cl2N5O12P3/c12-11(13,31(21,22)23)32(24,25)30-33(26,27)28-2-5-4(19)1-6(29-5)18-3-15-7-8(18)16-10(14)17-9(7)20/h3-6,19H,1-2H2,(H,24,25)(H,26,27)(H2,21,22,23)(H3,14,16,17,20)/t4-,5+,6+/m0/s1" 
G2C InChIKey         InChI                1.03  FJDLJIOCZHPQHU-KVQBGUIXSA-N                                                                                                                                                                                  
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
G2C "SYSTEMATIC NAME" ACDLabs              11.02 "2'-deoxy-5'-O-[(S)-{[(R)-[dichloro(phosphono)methyl](hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]guanosine"                                                
G2C "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "[[[[(2R,3S,5R)-5-(2-azanyl-6-oxo-1H-purin-9-yl)-3-hydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl]oxy-hydroxy-phosphoryl]-dichloro-methyl]phosphonic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
G2C "Create component"  2009-09-11 RCSB 
G2C "Modify descriptor" 2011-06-04 RCSB 
# 
