data_CCC
# 
_chem_comp.id                                    CCC 
_chem_comp.name                                  
;CYTIDINE-5'-PHOSPHATE-2',3'-CYCLIC PHOSPHATE
;
_chem_comp.type                                  "RNA LINKING" 
_chem_comp.pdbx_type                             ATOMN 
_chem_comp.formula                               "C9 H13 N3 O10 P2" 
_chem_comp.mon_nstd_parent_comp_id               C 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2000-01-19 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        385.161 
_chem_comp.one_letter_code                       C 
_chem_comp.three_letter_code                     CCC 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        1DUL 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
CCC PC     PC   P 0 1 N N S 62.852 10.549 40.954 -3.483 0.052  1.073  PC     CCC 1  
CCC O1C    O1C  O 0 1 N N N 61.889 9.613  41.592 -4.581 -0.929 1.224  O1C    CCC 2  
CCC O2C    O2C  O 0 1 N N N 64.135 9.838  40.736 -3.954 1.552  1.418  O2C    CCC 3  
CCC P      P    P 0 1 N N N 61.217 16.394 43.489 1.214  0.016  -4.369 P      CCC 4  
CCC OP1    O1P  O 0 1 N N N 62.059 17.550 43.091 1.825  1.329  -4.065 OP1    CCC 5  
CCC OP2    O2P  O 0 1 N N N 61.399 15.781 44.830 2.267  -0.889 -5.183 OP2    CCC 6  
CCC OP3    O3P  O 0 1 N Y N 59.678 16.839 43.379 -0.108 0.234  -5.262 OP3    CCC 7  
CCC "O5'"  O5*  O 0 1 N N N 61.375 15.246 42.394 0.818  -0.723 -2.995 "O5'"  CCC 8  
CCC "C5'"  C5*  C 0 1 N N N 60.762 13.975 42.582 -0.113 0.126  -2.323 "C5'"  CCC 9  
CCC "C4'"  C4*  C 0 1 N N R 61.090 13.054 41.430 -0.532 -0.522 -1.001 "C4'"  CCC 10 
CCC "O4'"  O4*  O 0 1 N N N 60.565 13.619 40.205 0.613  -0.691 -0.139 "O4'"  CCC 11 
CCC "C3'"  C3*  C 0 1 N N R 62.568 12.841 41.130 -1.480 0.412  -0.218 "C3'"  CCC 12 
CCC "O3'"  O3*  O 0 1 N N N 63.106 11.800 41.939 -2.836 -0.025 -0.422 "O3'"  CCC 13 
CCC "C2'"  C2*  C 0 1 N N R 62.544 12.400 39.672 -1.076 0.207  1.259  "C2'"  CCC 14 
CCC "O2'"  O2*  O 0 1 N N N 62.268 11.021 39.531 -2.192 -0.374 1.976  "O2'"  CCC 15 
CCC "C1'"  C1*  C 0 1 N N R 61.380 13.223 39.114 0.071  -0.825 1.192  "C1'"  CCC 16 
CCC N1     N1   N 0 1 N N N 61.795 14.426 38.379 1.095  -0.515 2.193  N1     CCC 17 
CCC C2     C2   C 0 1 N N N 62.038 14.315 37.014 1.712  0.680  2.171  C2     CCC 18 
CCC O2     O2   O 0 1 N N N 61.946 13.199 36.483 1.411  1.495  1.315  O2     CCC 19 
CCC N3     N3   N 0 1 N N N 62.371 15.415 36.306 2.646  0.987  3.069  N3     CCC 20 
CCC C4     C4   C 0 1 N N N 62.483 16.590 36.917 2.993  0.120  4.011  C4     CCC 21 
CCC N4     N4   N 0 1 N N N 62.804 17.650 36.170 3.959  0.449  4.933  N4     CCC 22 
CCC C5     C5   C 0 1 N N N 62.268 16.734 38.320 2.369  -1.143 4.058  C5     CCC 23 
CCC C6     C6   C 0 1 N N N 61.928 15.632 39.007 1.417  -1.439 3.142  C6     CCC 24 
CCC HOC2   2HOC H 0 0 N N N 64.750 10.436 40.328 -4.326 1.530  2.310  HOC2   CCC 25 
CCC HOP2   2HOP H 0 0 N N N 60.860 15.041 45.084 2.477  -0.411 -5.997 HOP2   CCC 26 
CCC HOP3   3HOP H 0 0 N N N 59.139 16.099 43.633 -0.474 -0.643 -5.437 HOP3   CCC 27 
CCC "H5'"  1H5* H 0 1 N N N 61.035 13.524 43.564 -0.992 0.270  -2.951 "H5'"  CCC 28 
CCC "H5''" 2H5* H 0 0 N N N 59.662 14.064 42.741 0.352  1.090  -2.122 "H5''" CCC 29 
CCC "H4'"  H4*  H 0 1 N N N 60.648 12.080 41.747 -1.013 -1.482 -1.186 "H4'"  CCC 30 
CCC "H3'"  H3*  H 0 1 N N N 63.191 13.744 41.326 -1.352 1.451  -0.523 "H3'"  CCC 31 
CCC "H2'"  H2*  H 0 1 N N N 63.522 12.554 39.159 -0.743 1.132  1.730  "H2'"  CCC 32 
CCC "H1'"  H1*  H 0 1 N N N 60.840 12.576 38.383 -0.315 -1.832 1.345  "H1'"  CCC 33 
CCC H41    1H4  H 0 1 N N N 62.890 18.551 36.638 4.390  1.317  4.896  H41    CCC 34 
CCC H42    2H4  H 0 1 N N N 62.139 17.733 35.401 4.208  -0.186 5.623  H42    CCC 35 
CCC H5     H5   H 0 1 N N N 62.363 17.686 38.867 2.639  -1.860 4.819  H5     CCC 36 
CCC H6     H6   H 0 1 N N N 61.757 15.717 40.093 0.921  -2.398 3.160  H6     CCC 37 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
CCC PC    O1C    DOUB N N 1  
CCC PC    O2C    SING N N 2  
CCC PC    "O3'"  SING N N 3  
CCC PC    "O2'"  SING N N 4  
CCC O2C   HOC2   SING N N 5  
CCC P     OP1    DOUB N N 6  
CCC P     OP2    SING N N 7  
CCC P     OP3    SING N N 8  
CCC P     "O5'"  SING N N 9  
CCC OP2   HOP2   SING N N 10 
CCC OP3   HOP3   SING N N 11 
CCC "O5'" "C5'"  SING N N 12 
CCC "C5'" "C4'"  SING N N 13 
CCC "C5'" "H5'"  SING N N 14 
CCC "C5'" "H5''" SING N N 15 
CCC "C4'" "O4'"  SING N N 16 
CCC "C4'" "C3'"  SING N N 17 
CCC "C4'" "H4'"  SING N N 18 
CCC "O4'" "C1'"  SING N N 19 
CCC "C3'" "O3'"  SING N N 20 
CCC "C3'" "C2'"  SING N N 21 
CCC "C3'" "H3'"  SING N N 22 
CCC "C2'" "O2'"  SING N N 23 
CCC "C2'" "C1'"  SING N N 24 
CCC "C2'" "H2'"  SING N N 25 
CCC "C1'" N1     SING N N 26 
CCC "C1'" "H1'"  SING N N 27 
CCC N1    C2     SING N N 28 
CCC N1    C6     SING N N 29 
CCC C2    O2     DOUB N N 30 
CCC C2    N3     SING N N 31 
CCC N3    C4     DOUB N N 32 
CCC C4    N4     SING N N 33 
CCC C4    C5     SING N N 34 
CCC N4    H41    SING N N 35 
CCC N4    H42    SING N N 36 
CCC C5    C6     DOUB N N 37 
CCC C5    H5     SING N N 38 
CCC C6    H6     SING N N 39 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
CCC SMILES           ACDLabs              10.04 "O=P1(OC2C(OC(C2O1)COP(=O)(O)O)N3C=CC(=NC3=O)N)O"                                                                                                                    
CCC SMILES_CANONICAL CACTVS               3.341 "NC1=NC(=O)N(C=C1)[C@@H]2O[C@H](CO[P](O)(O)=O)[C@H]3O[P@@](O)(=O)O[C@@H]23"                                                                                          
CCC SMILES           CACTVS               3.341 "NC1=NC(=O)N(C=C1)[CH]2O[CH](CO[P](O)(O)=O)[CH]3O[P](O)(=O)O[CH]23"                                                                                                  
CCC SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C1=CN(C(=O)N=C1N)[C@H]2[C@H]3[C@@H]([C@H](O2)COP(=O)(O)O)O[P@@](=O)(O3)O"                                                                                           
CCC SMILES           "OpenEye OEToolkits" 1.5.0 "C1=CN(C(=O)N=C1N)C2C3C(C(O2)COP(=O)(O)O)OP(=O)(O3)O"                                                                                                                
CCC InChI            InChI                1.03  "InChI=1S/C9H13N3O10P2/c10-5-1-2-12(9(13)11-5)8-7-6(21-24(17,18)22-7)4(20-8)3-19-23(14,15)16/h1-2,4,6-8H,3H2,(H,17,18)(H2,10,11,13)(H2,14,15,16)/t4-,6-,7-,8-/m1/s1" 
CCC InChIKey         InChI                1.03  IZJNKZMLZILGRK-XVFCMESISA-N                                                                                                                                          
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
CCC "SYSTEMATIC NAME" ACDLabs              10.04 "[(2S,3aR,4R,6R,6aR)-6-(4-amino-2-oxopyrimidin-1(2H)-yl)-2-hydroxy-2-oxidotetrahydrofuro[3,4-d][1,3,2]dioxaphosphol-4-yl]methyl dihydrogen phosphate" 
CCC "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(1R,3S,5R,6R,8R)-6-(4-amino-2-oxo-pyrimidin-1-yl)-3-hydroxy-3-oxo-2,4,7-trioxa-3$l^{5}-phosphabicyclo[3.3.0]octan-8-yl]methyl dihydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
CCC "Create component"  2000-01-19 RCSB 
CCC "Modify descriptor" 2011-06-04 RCSB 
# 
