data_8KC
# 
_chem_comp.id                                    8KC 
_chem_comp.name                                  "(2~{S})-2-[[(2~{S})-1-[[(2~{S})-3-(1~{H}-indol-3-yl)-1-oxidanyl-1-oxidanylidene-propan-2-yl]amino]-1-oxidanylidene-hexan-2-yl]amino]-4-phenyl-butanoic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C27 H33 N3 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2021-10-25 
_chem_comp.pdbx_modified_date                    2022-08-22 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        479.568 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     8KC 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7Q24 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
8KC C21  C1  C 0 1 N N N -45.626 61.262 -19.684 0.123  6.023  2.138  C21  8KC 1  
8KC C20  C2  C 0 1 N N N -47.153 61.454 -20.075 0.431  4.579  2.539  C20  8KC 2  
8KC C19  C3  C 0 1 N N N -47.468 62.909 -20.485 0.125  3.647  1.364  C19  8KC 3  
8KC C18  C4  C 0 1 N N N -48.926 63.102 -20.976 0.433  2.203  1.765  C18  8KC 4  
8KC C17  C5  C 0 1 N N S -49.963 62.914 -19.890 0.057  1.264  0.618  C17  8KC 5  
8KC C10  C6  C 0 1 Y N N -45.033 63.673 -16.382 3.948  -0.783 -1.008 C10  8KC 6  
8KC C11  C7  C 0 1 Y N N -44.442 64.940 -16.461 4.057  0.571  -0.685 C11  8KC 7  
8KC C12  C8  C 0 1 Y N N -43.111 65.064 -16.865 4.275  1.489  -1.673 C12  8KC 8  
8KC C13  C9  C 0 1 Y N N -42.374 63.929 -17.187 4.388  1.087  -2.997 C13  8KC 9  
8KC C14  C10 C 0 1 Y N N -42.963 62.668 -17.108 4.284  -0.244 -3.338 C14  8KC 10 
8KC C16  C11 C 0 1 N N N -49.734 63.912 -18.752 0.426  -0.150 0.984  C16  8KC 11 
8KC C27  C12 C 0 1 N N N -53.778 63.035 -20.253 -3.164 0.494  -1.084 C27  8KC 12 
8KC C28  C13 C 0 1 N N N -54.809 63.681 -19.279 -3.327 -0.788 -0.265 C28  8KC 13 
8KC C29  C14 C 0 1 Y N N -56.297 63.728 -19.797 -4.759 -1.252 -0.338 C29  8KC 14 
8KC C30  C15 C 0 1 Y N N -57.316 63.282 -18.965 -5.154 -2.118 -1.341 C30  8KC 15 
8KC C31  C16 C 0 1 Y N N -58.634 63.322 -19.395 -6.468 -2.544 -1.409 C31  8KC 16 
8KC C02  C17 C 0 1 N N N -48.104 65.900 -17.287 1.857  -2.045 3.089  C02  8KC 17 
8KC C04  C18 C 0 1 N N S -48.538 64.612 -16.636 2.067  -1.839 1.611  C04  8KC 18 
8KC C05  C19 C 0 1 N N N -47.515 64.143 -15.566 3.537  -2.088 1.266  C05  8KC 19 
8KC C06  C20 C 0 1 Y N N -46.326 63.237 -16.030 3.723  -2.002 -0.227 C06  8KC 20 
8KC C07  C21 C 0 1 Y N N -46.300 61.846 -16.139 3.715  -3.027 -1.094 C07  8KC 21 
8KC C09  C22 C 0 1 Y N N -44.304 62.547 -16.701 4.069  -1.197 -2.348 C09  8KC 22 
8KC C23  C23 C 0 1 N N S -52.397 62.791 -19.546 -1.711 0.966  -1.010 C23  8KC 23 
8KC C24  C24 C 0 1 N N N -52.277 61.366 -19.125 -1.522 2.157  -1.914 C24  8KC 24 
8KC C32  C25 C 0 1 Y N N -58.943 63.821 -20.665 -7.386 -2.104 -0.474 C32  8KC 25 
8KC C33  C26 C 0 1 Y N N -57.925 64.273 -21.499 -6.991 -1.238 0.529  C33  8KC 26 
8KC C34  C27 C 0 1 Y N N -56.607 64.233 -21.070 -5.676 -0.817 0.600  C34  8KC 27 
8KC N08  N1  N 0 1 Y N N -45.095 61.474 -16.545 3.916  -2.565 -2.366 N08  8KC 28 
8KC N15  N2  N 0 1 N N N -48.729 63.635 -17.701 1.709  -0.464 1.255  N15  8KC 29 
8KC N22  N3  N 0 1 N N N -51.303 63.130 -20.479 -1.389 1.345  0.372  N22  8KC 30 
8KC O01  O1  O 0 1 N N N -47.515 65.869 -18.400 1.449  -1.137 3.774  O01  8KC 31 
8KC O03  O2  O 0 1 N N N -48.347 67.010 -16.731 2.122  -3.238 3.644  O03  8KC 32 
8KC O25  O3  O 0 1 N N N -52.072 60.471 -19.976 -1.641 3.275  -1.473 O25  8KC 33 
8KC O26  O4  O 0 1 N N N -52.365 61.069 -17.910 -1.221 1.975  -3.210 O26  8KC 34 
8KC O35  O5  O 0 1 N N N -50.378 64.910 -18.717 -0.431 -1.007 1.036  O35  8KC 35 
8KC H211 H1  H 0 0 N N N -45.449 60.214 -19.400 -0.930 6.109  1.870  H211 8KC 36 
8KC H213 H2  H 0 0 N N N -44.992 61.521 -20.545 0.341  6.687  2.974  H213 8KC 37 
8KC H212 H3  H 0 0 N N N -45.379 61.918 -18.836 0.739  6.302  1.283  H212 8KC 38 
8KC H202 H4  H 0 0 N N N -47.777 61.186 -19.210 1.484  4.493  2.806  H202 8KC 39 
8KC H201 H5  H 0 0 N N N -47.390 60.788 -20.918 -0.185 4.300  3.394  H201 8KC 40 
8KC H192 H6  H 0 0 N N N -46.784 63.200 -21.296 -0.928 3.734  1.097  H192 8KC 41 
8KC H191 H7  H 0 0 N N N -47.303 63.561 -19.615 0.741  3.926  0.509  H191 8KC 42 
8KC H182 H8  H 0 0 N N N -49.025 64.121 -21.378 1.497  2.105  1.982  H182 8KC 43 
8KC H181 H9  H 0 0 N N N -49.123 62.372 -21.775 -0.144 1.942  2.652  H181 8KC 44 
8KC H171 H10 H 0 0 N N N -49.892 61.891 -19.492 0.595  1.558  -0.284 H171 8KC 45 
8KC H111 H11 H 0 0 N N N -45.015 65.820 -16.210 3.970  0.891  0.343  H111 8KC 46 
8KC H121 H12 H 0 0 N N N -42.654 66.041 -16.927 4.359  2.536  -1.422 H121 8KC 47 
8KC H131 H13 H 0 0 N N N -41.344 64.025 -17.499 4.555  1.825  -3.767 H131 8KC 48 
8KC H141 H14 H 0 0 N N N -42.391 61.787 -17.359 4.373  -0.547 -4.371 H141 8KC 49 
8KC H272 H15 H 0 0 N N N -53.627 63.706 -21.111 -3.430 0.298  -2.123 H272 8KC 50 
8KC H271 H16 H 0 0 N N N -54.174 62.072 -20.606 -3.818 1.268  -0.683 H271 8KC 51 
8KC H282 H17 H 0 0 N N N -54.795 63.106 -18.341 -2.673 -1.561 -0.667 H282 8KC 52 
8KC H281 H18 H 0 0 N N N -54.487 64.714 -19.081 -3.062 -0.591 0.774  H281 8KC 53 
8KC H301 H19 H 0 0 N N N -57.081 62.903 -17.981 -4.437 -2.461 -2.072 H301 8KC 54 
8KC H311 H20 H 0 0 N N N -59.423 62.967 -18.748 -6.776 -3.220 -2.192 H311 8KC 55 
8KC H041 H21 H 0 0 N N N -49.500 64.785 -16.130 1.440  -2.534 1.054  H041 8KC 56 
8KC H051 H22 H 0 0 N N N -47.080 65.046 -15.112 4.157  -1.337 1.753  H051 8KC 57 
8KC H052 H23 H 0 0 N N N -48.075 63.582 -14.803 3.828  -3.080 1.612  H052 8KC 58 
8KC H071 H24 H 0 0 N N N -47.126 61.183 -15.927 3.571  -4.064 -0.826 H071 8KC 59 
8KC H231 H25 H 0 0 N N N -52.341 63.440 -18.660 -1.050 0.159  -1.329 H231 8KC 60 
8KC H321 H26 H 0 0 N N N -59.970 63.855 -20.998 -8.412 -2.436 -0.527 H321 8KC 61 
8KC H331 H27 H 0 0 N N N -58.162 64.655 -22.481 -7.707 -0.898 1.262  H331 8KC 62 
8KC H341 H28 H 0 0 N N N -55.818 64.591 -21.715 -5.367 -0.141 1.383  H341 8KC 63 
8KC H081 H29 H 0 0 N N N -44.815 60.529 -16.711 3.940  -3.118 -3.162 H081 8KC 64 
8KC H151 H30 H 0 0 N N N -48.191 62.793 -17.721 2.394  0.221  1.213  H151 8KC 65 
8KC H221 H31 H 0 0 N N N -51.388 64.093 -20.736 -1.900 0.776  1.031  H221 8KC 66 
8KC H2   H33 H 0 1 N N N -48.024 67.716 -17.278 1.972  -3.323 4.596  H2   8KC 67 
8KC H3   H34 H 0 1 N N N -52.254 60.131 -17.804 -1.110 2.769  -3.750 H3   8KC 68 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
8KC C33 C34  DOUB Y N 1  
8KC C33 C32  SING Y N 2  
8KC C34 C29  SING Y N 3  
8KC C18 C19  SING N N 4  
8KC C18 C17  SING N N 5  
8KC C32 C31  DOUB Y N 6  
8KC C19 C20  SING N N 7  
8KC N22 C17  SING N N 8  
8KC N22 C23  SING N N 9  
8KC C27 C23  SING N N 10 
8KC C27 C28  SING N N 11 
8KC C20 C21  SING N N 12 
8KC O25 C24  DOUB N N 13 
8KC C17 C16  SING N N 14 
8KC C29 C28  SING N N 15 
8KC C29 C30  DOUB Y N 16 
8KC C23 C24  SING N N 17 
8KC C31 C30  SING Y N 18 
8KC C24 O26  SING N N 19 
8KC C16 O35  DOUB N N 20 
8KC C16 N15  SING N N 21 
8KC O01 C02  DOUB N N 22 
8KC N15 C04  SING N N 23 
8KC C02 O03  SING N N 24 
8KC C02 C04  SING N N 25 
8KC C13 C14  DOUB Y N 26 
8KC C13 C12  SING Y N 27 
8KC C14 C09  SING Y N 28 
8KC C12 C11  DOUB Y N 29 
8KC C09 N08  SING Y N 30 
8KC C09 C10  DOUB Y N 31 
8KC C04 C05  SING N N 32 
8KC N08 C07  SING Y N 33 
8KC C11 C10  SING Y N 34 
8KC C10 C06  SING Y N 35 
8KC C07 C06  DOUB Y N 36 
8KC C06 C05  SING N N 37 
8KC C21 H211 SING N N 38 
8KC C21 H213 SING N N 39 
8KC C21 H212 SING N N 40 
8KC C20 H202 SING N N 41 
8KC C20 H201 SING N N 42 
8KC C19 H192 SING N N 43 
8KC C19 H191 SING N N 44 
8KC C18 H182 SING N N 45 
8KC C18 H181 SING N N 46 
8KC C17 H171 SING N N 47 
8KC C11 H111 SING N N 48 
8KC C12 H121 SING N N 49 
8KC C13 H131 SING N N 50 
8KC C14 H141 SING N N 51 
8KC C27 H272 SING N N 52 
8KC C27 H271 SING N N 53 
8KC C28 H282 SING N N 54 
8KC C28 H281 SING N N 55 
8KC C30 H301 SING N N 56 
8KC C31 H311 SING N N 57 
8KC C04 H041 SING N N 58 
8KC C05 H051 SING N N 59 
8KC C05 H052 SING N N 60 
8KC C07 H071 SING N N 61 
8KC C23 H231 SING N N 62 
8KC C32 H321 SING N N 63 
8KC C33 H331 SING N N 64 
8KC C34 H341 SING N N 65 
8KC N08 H081 SING N N 66 
8KC N15 H151 SING N N 67 
8KC N22 H221 SING N N 68 
8KC O03 H2   SING N N 69 
8KC O26 H3   SING N N 70 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
8KC InChI            InChI                1.06  "InChI=1S/C27H33N3O5/c1-2-3-12-22(29-23(26(32)33)15-14-18-9-5-4-6-10-18)25(31)30-24(27(34)35)16-19-17-28-21-13-8-7-11-20(19)21/h4-11,13,17,22-24,28-29H,2-3,12,14-16H2,1H3,(H,30,31)(H,32,33)(H,34,35)/t22-,23-,24-/m0/s1" 
8KC InChIKey         InChI                1.06  YWBHCYRCVYEOPE-HJOGWXRNSA-N                                                                                                                                                                                                
8KC SMILES_CANONICAL CACTVS               3.385 "CCCC[C@H](N[C@@H](CCc1ccccc1)C(O)=O)C(=O)N[C@@H](Cc2c[nH]c3ccccc23)C(O)=O"                                                                                                                                                
8KC SMILES           CACTVS               3.385 "CCCC[CH](N[CH](CCc1ccccc1)C(O)=O)C(=O)N[CH](Cc2c[nH]c3ccccc23)C(O)=O"                                                                                                                                                     
8KC SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCC[C@@H](C(=O)N[C@@H](Cc1c[nH]c2c1cccc2)C(=O)O)N[C@@H](CCc3ccccc3)C(=O)O"                                                                                                                                               
8KC SMILES           "OpenEye OEToolkits" 2.0.7 "CCCCC(C(=O)NC(Cc1c[nH]c2c1cccc2)C(=O)O)NC(CCc3ccccc3)C(=O)O"                                                                                                                                                              
# 
_pdbx_chem_comp_identifier.comp_id           8KC 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(2~{S})-2-[[(2~{S})-1-[[(2~{S})-3-(1~{H}-indol-3-yl)-1-oxidanyl-1-oxidanylidene-propan-2-yl]amino]-1-oxidanylidene-hexan-2-yl]amino]-4-phenyl-butanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
8KC "Create component"  2021-10-25 PDBE 
8KC "Initial release"   2022-02-16 RCSB 
8KC "Modify descriptor" 2022-08-22 RCSB 
# 
