data_5VC
#

_chem_comp.id                                   5VC
_chem_comp.name                                 "4-(3-chloranyl-2-fluoranyl-phenoxy)-1-[[6-(1,3-thiazol-2-ylamino)pyridin-2-yl]methyl]cyclohexane-1-carboxylic acid"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C22 H21 Cl F N3 O3 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        MK-5108
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2015-12-08
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       461.937
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    5VC
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5EW9
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
5VC  C13  C1   C   0  1  Y  N  N  -15.745  11.585  17.790   3.996  -0.350  -0.580  C13  5VC   1  
5VC  C14  C2   C   0  1  Y  N  N  -16.825  10.886  18.344   3.979  -1.741  -0.613  C14  5VC   2  
5VC  C15  C3   C   0  1  Y  N  N  -16.592  10.012  19.385   2.811  -2.392  -0.967  C15  5VC   3  
5VC  C16  C4   C   0  1  Y  N  N  -15.282   9.880  19.836   1.695  -1.627  -1.278  C16  5VC   4  
5VC  C11  C5   C   0  1  Y  N  N  -14.258  10.609  19.238   1.782  -0.250  -1.225  C11  5VC   5  
5VC  C21  C6   C   0  1  Y  N  N  -14.282  14.740  14.616   7.438  -2.202   0.808  C21  5VC   6  
5VC  C27  C7   C   0  1  Y  N  N   -8.997  11.440  12.878  -7.284   0.813   0.811  C27  5VC   7  
5VC  O23  O1   O   0  1  N  N  N   -9.312  11.101  17.019  -3.439  -0.544   0.165  O23  5VC   8  
5VC  C24  C8   C   0  1  Y  N  N   -9.210  11.150  15.654  -4.706  -0.098   0.377  C24  5VC   9  
5VC  C25  C9   C   0  1  Y  N  N   -9.428  12.364  15.044  -5.789  -0.929   0.120  C25  5VC  10  
5VC  C26  C10  C   0  1  Y  N  N   -9.329  12.528  13.684  -7.076  -0.471   0.337  C26  5VC  11  
5VC  C18  C11  C   0  1  Y  N  N  -15.086  13.282  16.047   6.254  -0.396   0.251  C18  5VC  12  
5VC  N22  N1   N   0  1  Y  N  N  -15.404  14.094  15.074   6.322  -1.689   0.323  N22  5VC  13  
5VC  S19  S1   S   0  1  Y  N  N  -13.414  13.226  16.499   7.701   0.302   0.835  S19  5VC  14  
5VC  C20  C12  C   0  1  Y  N  N  -13.113  14.403  15.249   8.355  -1.301   1.163  C20  5VC  15  
5VC  N17  N2   N   0  1  N  N  N  -16.063  12.468  16.708   5.165   0.317  -0.230  N17  5VC  16  
5VC  C10  C13  C   0  1  N  N  N  -12.851  10.432  19.746   0.574   0.585  -1.561  C10  5VC  17  
5VC  C1   C14  C   0  1  N  N  N  -12.243   9.106  19.242   0.233   1.490  -0.375  C1   5VC  18  
5VC  C7   C15  C   0  1  N  N  N  -12.962   7.907  19.781   1.351   2.476  -0.158  C7   5VC  19  
5VC  O8   O2   O   0  1  N  N  N  -12.725   7.574  20.984   1.688   3.334  -1.134  O8   5VC  20  
5VC  O9   O3   O   0  1  N  N  N  -13.766   7.286  19.006   1.945   2.495   0.894  O9   5VC  21  
5VC  C2   C16  C   0  1  N  N  N  -10.785   8.981  19.692   0.054   0.637   0.882  C2   5VC  22  
5VC  C3   C17  C   0  1  N  N  N   -9.943  10.090  19.071  -1.081  -0.365   0.662  C3   5VC  23  
5VC  C4   C18  C   0  1  N  N  N  -10.015   9.990  17.539  -2.379   0.391   0.370  C4   5VC  24  
5VC  F30  F1   F   0  1  N  N  N   -9.757  13.434  15.781  -5.585  -2.182  -0.343  F30  5VC  25  
5VC  CL3  CL1  CL  0  0  N  N  N   -9.649  14.117  13.062  -8.432  -1.508   0.017  CL3  5VC  26  
5VC  C28  C19  C   0  1  Y  N  N   -8.781  10.205  13.506  -6.207   1.640   1.068  C28  5VC  27  
5VC  C29  C20  C   0  1  Y  N  N   -8.877  10.031  14.891  -4.919   1.187   0.852  C29  5VC  28  
5VC  C5   C21  C   0  1  N  N  N  -11.476  10.156  17.107  -2.200   1.245  -0.887  C5   5VC  29  
5VC  C6   C22  C   0  1  N  N  N  -12.326   9.045  17.716  -1.065   2.246  -0.667  C6   5VC  30  
5VC  N12  N3   N   0  1  Y  N  N  -14.491  11.450  18.225   2.910   0.344  -0.883  N12  5VC  31  
5VC  H1   H1   H   0  1  N  N  N  -17.825  11.029  17.962   4.866  -2.305  -0.365  H1   5VC  32  
5VC  H2   H2   H   0  1  N  N  N  -17.397   9.450  19.834   2.769  -3.470  -1.002  H2   5VC  33  
5VC  H3   H3   H   0  1  N  N  N  -15.059   9.210  20.653   0.768  -2.104  -1.559  H3   5VC  34  
5VC  H4   H4   H   0  1  N  N  N  -14.318  15.462  13.814   7.593  -3.266   0.914  H4   5VC  35  
5VC  H5   H5   H   0  1  N  N  N   -8.909  11.545  11.807  -8.290   1.170   0.976  H5   5VC  36  
5VC  H6   H6   H   0  1  N  N  N  -12.142  14.810  15.007   9.328  -1.516   1.578  H6   5VC  37  
5VC  H7   H7   H   0  1  N  N  N  -17.013  12.519  16.399   5.220   1.281  -0.323  H7   5VC  38  
5VC  H8   H8   H   0  1  N  N  N  -12.232  11.269  19.391   0.788   1.199  -2.436  H8   5VC  39  
5VC  H9   H9   H   0  1  N  N  N  -12.864  10.427  20.846  -0.272  -0.068  -1.774  H9   5VC  40  
5VC  H10  H10  H   0  1  N  N  N  -13.234   6.803  21.206   2.412   3.948  -0.948  H10  5VC  41  
5VC  H11  H11  H   0  1  N  N  N  -10.390   8.005  19.375   0.979   0.098   1.090  H11  5VC  42  
5VC  H12  H12  H   0  1  N  N  N  -10.736   9.058  20.788  -0.188   1.281   1.727  H12  5VC  43  
5VC  H13  H13  H   0  1  N  N  N   -8.898   9.983  19.397  -0.838  -1.009  -0.183  H13  5VC  44  
5VC  H14  H14  H   0  1  N  N  N  -10.329  11.068  19.393  -1.208  -0.973   1.558  H14  5VC  45  
5VC  H15  H15  H   0  1  N  N  N   -9.609   9.029  17.190  -2.621   1.036   1.215  H15  5VC  46  
5VC  H16  H16  H   0  1  N  N  N   -8.530   9.351  12.894  -6.372   2.641   1.437  H16  5VC  47  
5VC  H17  H17  H   0  1  N  N  N   -8.700   9.070  15.350  -4.078   1.835   1.053  H17  5VC  48  
5VC  H18  H18  H   0  1  N  N  N  -11.850  11.132  17.451  -1.957   0.600  -1.732  H18  5VC  49  
5VC  H19  H19  H   0  1  N  N  N  -11.540  10.105  16.010  -3.125   1.783  -1.095  H19  5VC  50  
5VC  H20  H20  H   0  1  N  N  N  -13.373   9.172  17.402  -1.307   2.891   0.178  H20  5VC  51  
5VC  H21  H21  H   0  1  N  N  N  -11.955   8.069  17.369  -0.938   2.854  -1.562  H21  5VC  52  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
5VC  C27  C28  DOUB  Y  N   1  
5VC  C27  C26  SING  Y  N   2  
5VC  CL3  C26  SING  N  N   3  
5VC  C28  C29  SING  Y  N   4  
5VC  C26  C25  DOUB  Y  N   5  
5VC  C21  N22  SING  Y  N   6  
5VC  C21  C20  DOUB  Y  N   7  
5VC  C29  C24  DOUB  Y  N   8  
5VC  C25  C24  SING  Y  N   9  
5VC  C25  F30  SING  N  N  10  
5VC  N22  C18  DOUB  Y  N  11  
5VC  C20  S19  SING  Y  N  12  
5VC  C24  O23  SING  N  N  13  
5VC  C18  S19  SING  Y  N  14  
5VC  C18  N17  SING  N  N  15  
5VC  N17  C13  SING  N  N  16  
5VC  O23  C4   SING  N  N  17  
5VC  C5   C4   SING  N  N  18  
5VC  C5   C6   SING  N  N  19  
5VC  C4   C3   SING  N  N  20  
5VC  C6   C1   SING  N  N  21  
5VC  C13  N12  DOUB  Y  N  22  
5VC  C13  C14  SING  Y  N  23  
5VC  N12  C11  SING  Y  N  24  
5VC  C14  C15  DOUB  Y  N  25  
5VC  O9   C7   DOUB  N  N  26  
5VC  C3   C2   SING  N  N  27  
5VC  C11  C10  SING  N  N  28  
5VC  C11  C16  DOUB  Y  N  29  
5VC  C1   C2   SING  N  N  30  
5VC  C1   C10  SING  N  N  31  
5VC  C1   C7   SING  N  N  32  
5VC  C15  C16  SING  Y  N  33  
5VC  C7   O8   SING  N  N  34  
5VC  C14  H1   SING  N  N  35  
5VC  C15  H2   SING  N  N  36  
5VC  C16  H3   SING  N  N  37  
5VC  C21  H4   SING  N  N  38  
5VC  C27  H5   SING  N  N  39  
5VC  C20  H6   SING  N  N  40  
5VC  N17  H7   SING  N  N  41  
5VC  C10  H8   SING  N  N  42  
5VC  C10  H9   SING  N  N  43  
5VC  O8   H10  SING  N  N  44  
5VC  C2   H11  SING  N  N  45  
5VC  C2   H12  SING  N  N  46  
5VC  C3   H13  SING  N  N  47  
5VC  C3   H14  SING  N  N  48  
5VC  C4   H15  SING  N  N  49  
5VC  C28  H16  SING  N  N  50  
5VC  C29  H17  SING  N  N  51  
5VC  C5   H18  SING  N  N  52  
5VC  C5   H19  SING  N  N  53  
5VC  C6   H20  SING  N  N  54  
5VC  C6   H21  SING  N  N  55  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
5VC  InChI             InChI                 1.03   "InChI=1S/C22H21ClFN3O3S/c23-16-4-2-5-17(19(16)24)30-15-7-9-22(10-8-15,20(28)29)13-14-3-1-6-18(26-14)27-21-25-11-12-31-21/h1-6,11-12,15H,7-10,13H2,(H,28,29)(H,25,26,27)/t15-,22-"  
5VC  InChIKey          InChI                 1.03   LCVIRAZGMYMNNT-VVONHTQRSA-N  
5VC  SMILES_CANONICAL  CACTVS                3.385  "OC(=O)[C@]1(CC[C@@H](CC1)Oc2cccc(Cl)c2F)Cc3cccc(Nc4sccn4)n3"  
5VC  SMILES            CACTVS                3.385  "OC(=O)[C]1(CC[CH](CC1)Oc2cccc(Cl)c2F)Cc3cccc(Nc4sccn4)n3"  
5VC  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.4  "c1cc(nc(c1)Nc2nccs2)CC3(CCC(CC3)Oc4cccc(c4F)Cl)C(=O)O"  
5VC  SMILES            "OpenEye OEToolkits"  2.0.4  "c1cc(nc(c1)Nc2nccs2)CC3(CCC(CC3)Oc4cccc(c4F)Cl)C(=O)O"  
#
_pdbx_chem_comp_identifier.comp_id          5VC
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.4
_pdbx_chem_comp_identifier.identifier       "4-(3-chloranyl-2-fluoranyl-phenoxy)-1-[[6-(1,3-thiazol-2-ylamino)pyridin-2-yl]methyl]cyclohexane-1-carboxylic acid"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
5VC  "Create component"  2015-12-08  RCSB  
5VC  "Initial release"   2016-01-20  RCSB  
5VC  "Modify synonyms"   2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     5VC
_pdbx_chem_comp_synonyms.name        MK-5108
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
