data_3YC
# 
_chem_comp.id                                    3YC 
_chem_comp.name                                  "(S)-2-({5-[4-(2-Amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]-pyrimidin-6-yl)butyl]thiophene-3-carbonyl}amino)pentanedioic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C20 H23 N5 O6 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2014-12-10 
_chem_comp.pdbx_modified_date                    2016-04-15 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        461.492 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     3YC 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4ZYY 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
3YC N1  N1  N 0 1 N N N 25.694 -10.730 26.837 8.375   -1.412 0.956  N1  3YC 1  
3YC C2  C1  C 0 1 N N N 24.599 -10.859 26.090 9.554   -0.832 0.954  C2  3YC 2  
3YC N3  N2  N 0 1 N N N 23.976 -12.047 25.996 9.785   0.340  0.297  N3  3YC 3  
3YC C4  C2  C 0 1 N N N 24.418 -13.139 26.664 8.786   0.947  -0.382 C4  3YC 4  
3YC N5  N3  N 0 1 Y N N 27.239 -11.871 28.316 6.032   -1.243 0.142  N5  3YC 5  
3YC C6  C3  C 0 1 Y N N 27.353 -13.115 28.788 5.372   -0.320 -0.630 C6  3YC 6  
3YC C7  C4  C 0 1 Y N N 26.315 -13.887 28.270 6.219   0.661  -0.983 C7  3YC 7  
3YC C8  C5  C 0 1 Y N N 25.560 -13.024 27.451 7.513   0.334  -0.388 C8  3YC 8  
3YC C9  C6  C 0 1 Y N N 26.182 -11.774 27.523 7.334   -0.872 0.306  C9  3YC 9  
3YC O10 O1  O 0 1 N N N 23.812 -14.197 26.555 8.978   1.995  -0.974 O10 3YC 10 
3YC N11 N4  N 0 1 N N N 24.092 -9.733  25.372 10.587  -1.426 1.636  N11 3YC 11 
3YC C12 C7  C 0 1 Y N N 26.399 -11.047 33.971 -1.535  0.155  0.584  C12 3YC 12 
3YC C13 C8  C 0 1 Y N N 25.394 -10.161 34.415 -2.867  0.321  0.051  C13 3YC 13 
3YC C14 C9  C 0 1 Y N N 24.115 -10.634 34.374 -2.978  1.390  -0.783 C14 3YC 14 
3YC S15 S1  S 0 1 Y N N 24.237 -12.221 33.752 -1.486  2.201  -0.930 S15 3YC 15 
3YC C16 C10 C 0 1 Y N N 25.931 -12.258 33.574 -0.685  1.082  0.159  C16 3YC 16 
3YC C17 C11 C 0 1 N N N 25.721 -8.832  34.861 -3.989  -0.575 0.376  C17 3YC 17 
3YC O18 O2  O 0 1 N N N 24.862 -8.140  35.387 -3.819  -1.514 1.130  O18 3YC 18 
3YC N19 N5  N 0 1 N N N 27.051 -8.335  34.649 -5.205  -0.354 -0.163 N19 3YC 19 
3YC C20 C12 C 0 1 N N S 27.453 -7.099  35.018 -6.321  -1.246 0.161  C20 3YC 20 
3YC C21 C13 C 0 1 N N N 28.815 -7.147  35.402 -7.642  -0.496 -0.022 C21 3YC 21 
3YC C22 C14 C 0 1 N N N 28.953 -7.352  36.871 -7.727  0.643  0.996  C22 3YC 22 
3YC C23 C15 C 0 1 N N N 30.321 -7.872  37.162 -9.028  1.382  0.816  C23 3YC 23 
3YC O24 O3  O 0 1 N N N 31.336 -7.246  36.748 -9.808  1.033  -0.038 O24 3YC 24 
3YC O25 O4  O 0 1 N N N 30.459 -8.940  37.819 -9.321  2.428  1.605  O25 3YC 25 
3YC C26 C16 C 0 1 N N N 27.336 -6.198  33.934 -6.291  -2.441 -0.757 C26 3YC 26 
3YC O27 O5  O 0 1 N N N 26.870 -5.045  34.133 -7.226  -3.398 -0.643 O27 3YC 27 
3YC O28 O6  O 0 1 N N N 27.699 -6.525  32.767 -5.426  -2.539 -1.594 O28 3YC 28 
3YC C29 C17 C 0 1 N N N 28.420 -13.586 29.707 3.919   -0.397 -1.022 C29 3YC 29 
3YC C30 C18 C 0 1 N N N 27.784 -14.072 30.965 3.081   0.419  -0.036 C30 3YC 30 
3YC C31 C19 C 0 1 N N N 27.355 -12.898 31.768 1.606   0.342  -0.435 C31 3YC 31 
3YC C32 C20 C 0 1 N N N 26.761 -13.375 33.051 0.768   1.158  0.551  C32 3YC 32 
3YC H1  H1  H 0 1 N N N 23.164 -12.126 25.417 10.669  0.740  0.317  H1  3YC 33 
3YC H2  H2  H 0 1 N N N 27.863 -11.119 28.531 5.631   -2.043 0.518  H2  3YC 34 
3YC H3  H3  H 0 1 N N N 26.127 -14.934 28.458 5.988   1.524  -1.589 H3  3YC 35 
3YC H4  H4  H 0 1 N N N 24.559 -8.851  25.431 10.440  -2.260 2.109  H4  3YC 36 
3YC H5  H5  H 0 1 N N N 23.270 -9.827  24.810 11.464  -1.011 1.645  H5  3YC 37 
3YC H6  H6  H 0 1 N N N 27.447 -10.785 33.949 -1.260  -0.639 1.263  H6  3YC 38 
3YC H7  H7  H 0 1 N N N 23.216 -10.115 34.672 -3.889  1.685  -1.283 H7  3YC 39 
3YC H8  H8  H 0 1 N N N 27.715 -8.936  34.204 -5.341  0.394  -0.764 H8  3YC 40 
3YC H9  H9  H 0 1 N N N 26.848 -6.736  35.862 -6.233  -1.579 1.195  H9  3YC 41 
3YC H10 H10 H 0 1 N N N 29.307 -7.978  34.876 -7.691  -0.087 -1.031 H10 3YC 42 
3YC H11 H11 H 0 1 N N N 29.300 -6.199  35.125 -8.474  -1.183 0.132  H11 3YC 43 
3YC H12 H12 H 0 1 N N N 28.803 -6.395  37.393 -7.678  0.234  2.005  H12 3YC 44 
3YC H13 H13 H 0 1 N N N 28.202 -8.078  37.214 -6.895  1.330  0.842  H13 3YC 45 
3YC H14 H14 H 0 1 N N N 31.384 -9.136  37.916 -10.167 2.870  1.452  H14 3YC 46 
3YC H15 H15 H 0 1 N N N 26.862 -4.561  33.316 -7.165  -4.146 -1.254 H15 3YC 47 
3YC H16 H16 H 0 1 N N N 28.981 -14.406 29.234 3.793   0.006  -2.027 H16 3YC 48 
3YC H17 H17 H 0 1 N N N 29.106 -12.757 29.935 3.592   -1.436 -1.003 H17 3YC 49 
3YC H18 H18 H 0 1 N N N 26.909 -14.693 30.721 3.208   0.017  0.969  H18 3YC 50 
3YC H19 H19 H 0 1 N N N 28.508 -14.668 31.539 3.408   1.459  -0.055 H19 3YC 51 
3YC H20 H20 H 0 1 N N N 28.225 -12.259 31.980 1.479   0.745  -1.439 H20 3YC 52 
3YC H21 H21 H 0 1 N N N 26.605 -12.322 31.206 1.279   -0.697 -0.416 H21 3YC 53 
3YC H22 H22 H 0 1 N N N 26.135 -14.262 32.873 1.095   2.198  0.533  H22 3YC 54 
3YC H23 H23 H 0 1 N N N 27.557 -13.625 33.768 0.895   0.756  1.556  H23 3YC 55 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
3YC N11 C2  SING N N 1  
3YC N3  C2  SING N N 2  
3YC N3  C4  SING N N 3  
3YC C2  N1  DOUB N N 4  
3YC O10 C4  DOUB N N 5  
3YC C4  C8  SING N N 6  
3YC N1  C9  SING N N 7  
3YC C8  C9  DOUB Y N 8  
3YC C8  C7  SING Y N 9  
3YC C9  N5  SING Y N 10 
3YC C7  C6  DOUB Y N 11 
3YC N5  C6  SING Y N 12 
3YC C6  C29 SING N N 13 
3YC C29 C30 SING N N 14 
3YC C30 C31 SING N N 15 
3YC C31 C32 SING N N 16 
3YC O28 C26 DOUB N N 17 
3YC C32 C16 SING N N 18 
3YC C16 S15 SING Y N 19 
3YC C16 C12 DOUB Y N 20 
3YC S15 C14 SING Y N 21 
3YC C26 O27 SING N N 22 
3YC C26 C20 SING N N 23 
3YC C12 C13 SING Y N 24 
3YC C14 C13 DOUB Y N 25 
3YC C13 C17 SING N N 26 
3YC N19 C17 SING N N 27 
3YC N19 C20 SING N N 28 
3YC C17 O18 DOUB N N 29 
3YC C20 C21 SING N N 30 
3YC C21 C22 SING N N 31 
3YC O24 C23 DOUB N N 32 
3YC C22 C23 SING N N 33 
3YC C23 O25 SING N N 34 
3YC N3  H1  SING N N 35 
3YC N5  H2  SING N N 36 
3YC C7  H3  SING N N 37 
3YC N11 H4  SING N N 38 
3YC N11 H5  SING N N 39 
3YC C12 H6  SING N N 40 
3YC C14 H7  SING N N 41 
3YC N19 H8  SING N N 42 
3YC C20 H9  SING N N 43 
3YC C21 H10 SING N N 44 
3YC C21 H11 SING N N 45 
3YC C22 H12 SING N N 46 
3YC C22 H13 SING N N 47 
3YC O25 H14 SING N N 48 
3YC O27 H15 SING N N 49 
3YC C29 H16 SING N N 50 
3YC C29 H17 SING N N 51 
3YC C30 H18 SING N N 52 
3YC C30 H19 SING N N 53 
3YC C31 H20 SING N N 54 
3YC C31 H21 SING N N 55 
3YC C32 H22 SING N N 56 
3YC C32 H23 SING N N 57 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
3YC SMILES           ACDLabs              12.01 "N=2c3nc(CCCCc1cc(C(=O)NC(CCC(O)=O)C(O)=O)cs1)cc3C(NC=2N)=O"                                                                                                                                     
3YC InChI            InChI                1.03  "InChI=1S/C20H23N5O6S/c21-20-24-16-13(18(29)25-20)8-11(22-16)3-1-2-4-12-7-10(9-32-12)17(28)23-14(19(30)31)5-6-15(26)27/h7-9,14H,1-6H2,(H,23,28)(H,26,27)(H,30,31)(H4,21,22,24,25,29)/t14-/m0/s1" 
3YC InChIKey         InChI                1.03  JBVKQLSCSCXKDY-AWEZNQCLSA-N                                                                                                                                                                      
3YC SMILES_CANONICAL CACTVS               3.385 "NC1=Nc2[nH]c(CCCCc3scc(c3)C(=O)N[C@@H](CCC(O)=O)C(O)=O)cc2C(=O)N1"                                                                                                                              
3YC SMILES           CACTVS               3.385 "NC1=Nc2[nH]c(CCCCc3scc(c3)C(=O)N[CH](CCC(O)=O)C(O)=O)cc2C(=O)N1"                                                                                                                                
3YC SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "c1c(csc1CCCCc2cc3c([nH]2)N=C(NC3=O)N)C(=O)N[C@@H](CCC(=O)O)C(=O)O"                                                                                                                              
3YC SMILES           "OpenEye OEToolkits" 1.9.2 "c1c(csc1CCCCc2cc3c([nH]2)N=C(NC3=O)N)C(=O)NC(CCC(=O)O)C(=O)O"                                                                                                                                   
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
3YC "SYSTEMATIC NAME" ACDLabs              12.01 "N-({5-[4-(2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-6-yl)butyl]thiophen-3-yl}carbonyl)-L-glutamic acid"                   
3YC "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "(2S)-2-[[5-[4-(2-azanyl-4-oxidanylidene-3,7-dihydropyrrolo[2,3-d]pyrimidin-6-yl)butyl]thiophen-3-yl]carbonylamino]pentanedioic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
3YC "Create component" 2014-12-10 RCSB 
3YC "Modify name"      2015-06-09 RCSB 
3YC "Initial release"  2016-04-20 RCSB 
# 
