data_UYA
# 
_chem_comp.id                                    UYA 
_chem_comp.name                                  "(4R)-4-hydroxy-D-proline" 
_chem_comp.type                                  "D-peptide linking" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C5 H9 N O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2020-06-04 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        131.130 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     UYA 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6X9B 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
UYA N   N1  N 0 1 N N N Y Y N -22.913 74.300 103.125 -0.167 1.350  -0.372 N   UYA 1  
UYA CA  C1  C 0 1 N N R Y N N -22.100 73.470 102.169 0.457  0.033  -0.621 CA  UYA 2  
UYA C   C2  C 0 1 N N N Y N Y -22.211 74.085 100.747 1.803  -0.045 0.052  C   UYA 3  
UYA OXT O1  O 0 1 N Y N Y N Y -23.026 75.005 100.575 2.669  -1.012 -0.290 O   UYA 4  
UYA CB  C3  C 0 1 N N N N N N -20.638 73.501 102.660 -0.520 -0.992 0.007  CB  UYA 5  
UYA CG  C4  C 0 1 N N R N N N -20.570 74.846 103.391 -1.896 -0.356 -0.322 CG  UYA 6  
UYA CD  C5  C 0 1 N N N N N N -21.970 74.984 104.031 -1.619 1.157  -0.198 CD  UYA 7  
UYA OD1 O2  O 0 1 N N N N N N -20.339 75.865 102.479 -2.883 -0.769 0.626  OD1 UYA 8  
UYA O   O3  O 0 1 N N N Y N Y -21.442 73.585 99.876  2.103  0.763  0.899  OXT UYA 9  
UYA H   H1  H 0 1 N Y N Y Y N -23.451 74.975 102.619 0.238  1.795  0.438  H1  UYA 10 
UYA HA  H3  H 0 1 N N N Y N N -22.467 72.433 102.154 0.556  -0.143 -1.692 H3  UYA 11 
UYA HXT H4  H 0 1 N Y N Y N Y -22.993 75.293 99.670  3.520  -1.021 0.168  H4  UYA 12 
UYA HB2 H5  H 0 1 N N N N N N -20.429 72.665 103.343 -0.418 -1.969 -0.466 H5  UYA 13 
UYA HB3 H6  H 0 1 N N N N N N -19.933 73.470 101.816 -0.370 -1.065 1.084  H6  UYA 14 
UYA HG2 H7  H 0 1 N N N N N N -19.802 74.809 104.177 -2.205 -0.609 -1.336 H7  UYA 15 
UYA HD2 H8  H 0 1 N N N N N N -22.240 76.046 104.130 -1.924 1.510  0.787  H8  UYA 16 
UYA HD3 H9  H 0 1 N N N N N N -21.983 74.509 105.023 -2.161 1.698  -0.973 H9  UYA 17 
UYA H10 H10 H 0 1 N N N N N N -20.298 76.697 102.936 -3.761 -0.399 0.465  H10 UYA 18 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
UYA O   C   DOUB N N 1  
UYA OXT C   SING N N 2  
UYA C   CA  SING N N 3  
UYA CA  CB  SING N N 4  
UYA CA  N   SING N N 5  
UYA OD1 CG  SING N N 6  
UYA CB  CG  SING N N 7  
UYA N   CD  SING N N 8  
UYA CG  CD  SING N N 9  
UYA N   H   SING N N 10 
UYA CA  HA  SING N N 11 
UYA OXT HXT SING N N 12 
UYA CB  HB2 SING N N 13 
UYA CB  HB3 SING N N 14 
UYA CG  HG2 SING N N 15 
UYA CD  HD2 SING N N 16 
UYA CD  HD3 SING N N 17 
UYA OD1 H10 SING N N 18 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
UYA SMILES           ACDLabs              12.01 "N1CC(CC1C(O)=O)O"                                                           
UYA InChI            InChI                1.03  "InChI=1S/C5H9NO3/c7-3-1-4(5(8)9)6-2-3/h3-4,6-7H,1-2H2,(H,8,9)/t3-,4-/m1/s1" 
UYA InChIKey         InChI                1.03  PMMYEEVYMWASQN-QWWZWVQMSA-N                                                  
UYA SMILES_CANONICAL CACTVS               3.385 "O[C@H]1CN[C@H](C1)C(O)=O"                                                   
UYA SMILES           CACTVS               3.385 "O[CH]1CN[CH](C1)C(O)=O"                                                     
UYA SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C1[C@H](CN[C@H]1C(=O)O)O"                                                   
UYA SMILES           "OpenEye OEToolkits" 2.0.7 "C1C(CNC1C(=O)O)O"                                                           
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
UYA "SYSTEMATIC NAME" ACDLabs              12.01 "(4R)-4-hydroxy-D-proline"                              
UYA "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{R},4~{R})-4-oxidanylpyrrolidine-2-carboxylic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
UYA "Create component" 2020-06-04 RCSB 
UYA "Initial release"  2020-12-30 RCSB 
UYA "Modify backbone"  2024-09-25 PDBE 
UYA "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            UYA 
_pdbx_chem_comp_pcm.modified_residue_id                DPR 
_pdbx_chem_comp_pcm.type                               Hydroxylation 
_pdbx_chem_comp_pcm.category                           "Named protein modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               ? 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   ? 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
