data_NF9
# 
_chem_comp.id                                    NF9 
_chem_comp.name                                  "2-chloranyl-N-[2-[1-[4-[(4-chlorophenyl)amino]oxan-4-yl]carbonylpiperidin-4-yl]ethyl]ethanamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C21 H29 Cl2 N3 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-08-17 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        442.379 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     NF9 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8AQZ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
NF9 C4  C1  C  0 1 N N N N N N -20.227 -24.082 -1.181 2.506  0.520  -1.636 C4  NF9 1  
NF9 C14 C2  C  0 1 Y N N N N N -19.591 -20.902 2.642  -0.913 -2.863 1.252  C14 NF9 2  
NF9 C5  C3  C  0 1 N N N N N N -19.023 -23.333 -1.789 1.211  1.330  -1.554 C5  NF9 3  
NF9 C6  C4  C  0 1 N N N N N N -19.090 -21.843 -1.440 0.276  0.914  -2.691 C6  NF9 4  
NF9 C11 C5  C  0 1 Y N N N N N -16.985 -21.443 1.857  -2.622 -1.450 -0.408 C11 NF9 5  
NF9 C7  C6  C  0 1 N N N N N N -17.876 -21.069 -1.921 -1.005 1.752  -2.626 C7  NF9 6  
NF9 C8  C7  C  0 1 N N N N N N -15.660 -21.083 -0.683 -2.873 1.239  -1.131 C8  NF9 7  
NF9 C13 C8  C  0 1 Y N N N N N -18.943 -22.056 3.013  -1.367 -3.432 0.075  C13 NF9 8  
NF9 N1  N1  N  0 1 N N N N N N -21.523 -25.083 -3.122 4.730  0.245  -0.655 N1  NF9 9  
NF9 N2  N2  N  0 1 N N N N N N -16.631 -21.677 -1.414 -1.590 1.619  -1.285 N2  NF9 10 
NF9 N3  N3  N  0 1 N N N N N N -17.013 -19.372 0.579  -2.584 0.408  1.132  N3  NF9 11 
NF9 O1  O1  O  0 1 N N N N N N -19.994 -26.625 -2.424 5.636  1.395  1.011  O1  NF9 12 
NF9 C1  C9  C  0 1 N N N N N N -20.899 -26.263 -3.191 5.747  0.512  0.187  C1  NF9 13 
NF9 C2  C10 C  0 1 N N N N N N -21.335 -27.263 -4.242 7.023  -0.286 0.106  C2  NF9 14 
NF9 C3  C11 C  0 1 N N N N N N -21.496 -24.101 -2.028 3.490  1.021  -0.577 C3  NF9 15 
NF9 O2  O2  O  0 1 N N N N N N -14.641 -21.752 -0.442 -3.544 0.958  -2.101 O2  NF9 16 
NF9 C9  C12 C  0 1 N N N N N N -15.772 -19.650 -0.130 -3.476 1.163  0.249  C9  NF9 17 
NF9 C10 C13 C  0 1 Y N N N N N -17.606 -20.257 1.450  -2.176 -0.880 0.777  C10 NF9 18 
NF9 C12 C14 C  0 1 Y N N N N N -17.658 -22.343 2.649  -2.221 -2.726 -0.754 C12 NF9 19 
NF9 CL2 CL1 CL 0 0 N N N N N N -19.782 -23.186 3.995  -0.865 -5.036 -0.362 CL2 NF9 20 
NF9 C15 C15 C  0 1 Y N N N N N -18.925 -20.005 1.839  -1.315 -1.590 1.605  C15 NF9 21 
NF9 C16 C16 C  0 1 N N N N N N -15.625 -18.643 -1.288 -4.837 0.464  0.176  C16 NF9 22 
NF9 C17 C17 C  0 1 N N N N N N -15.467 -17.247 -0.756 -5.476 0.462  1.567  C17 NF9 23 
NF9 O3  O3  O  0 1 N N N N N N -14.373 -17.163 0.163  -5.600 1.806  2.035  O3  NF9 24 
NF9 C18 C18 C  0 1 N N N N N N -14.561 -17.994 1.299  -4.354 2.494  2.168  C18 NF9 25 
NF9 C19 C19 C  0 1 N N N N N N -14.611 -19.422 0.859  -3.668 2.578  0.802  C19 NF9 26 
NF9 C20 C20 C  0 1 N N N N N N -16.503 -23.087 -1.839 -0.748 1.907  -0.116 C20 NF9 27 
NF9 C21 C21 C  0 1 N N N N N N -17.683 -23.904 -1.331 0.530  1.068  -0.209 C21 NF9 28 
NF9 H1  H1  H  0 1 N N N N N N -20.470 -23.605 -0.220 2.287  -0.533 -1.459 H1  NF9 29 
NF9 H2  H2  H  0 1 N N N N N N -19.922 -25.125 -1.007 2.947  0.638  -2.626 H2  NF9 30 
NF9 H3  H3  H  0 1 N N N N N N -20.600 -20.704 2.973  -0.247 -3.417 1.897  H3  NF9 31 
NF9 H4  H4  H  0 1 N N N N N N -19.081 -23.430 -2.883 1.441  2.392  -1.643 H4  NF9 32 
NF9 H5  H5  H  0 1 N N N N N N -19.161 -21.741 -0.347 0.771  1.080  -3.648 H5  NF9 33 
NF9 H6  H6  H  0 1 N N N N N N -19.988 -21.413 -1.907 0.026  -0.142 -2.589 H6  NF9 34 
NF9 H7  H7  H  0 1 N N N N N N -15.972 -21.653 1.547  -3.288 -0.899 -1.056 H7  NF9 35 
NF9 H8  H8  H  0 1 N N N N N N -17.858 -21.074 -3.021 -0.767 2.798  -2.819 H8  NF9 36 
NF9 H9  H9  H  0 1 N N N N N N -17.944 -20.032 -1.560 -1.714 1.393  -3.372 H9  NF9 37 
NF9 H10 H10 H  0 1 N N N N N N -22.079 -24.837 -3.916 4.819  -0.462 -1.314 H10 NF9 38 
NF9 H11 H11 H  0 1 N N N N N N -16.845 -18.540 1.108  -2.277 0.803  1.963  H11 NF9 39 
NF9 H12 H12 H  0 1 N N N N N N -21.697 -28.179 -3.751 6.804  -1.339 0.283  H12 NF9 40 
NF9 H13 H13 H  0 1 N N N N N N -22.143 -26.829 -4.850 7.463  -0.168 -0.884 H13 NF9 41 
NF9 CL1 CL2 CL 0 0 N Y N N N N -20.502 -27.499 -4.870 8.182  0.305  1.354  CL1 NF9 42 
NF9 H15 H15 H  0 1 N N N N N N -21.622 -23.101 -2.469 3.709  2.074  -0.754 H15 NF9 43 
NF9 H16 H16 H  0 1 N N N N N N -22.343 -24.316 -1.361 3.050  0.903  0.413  H16 NF9 44 
NF9 H17 H17 H  0 1 N N N N N N -17.182 -23.256 2.976  -2.574 -3.172 -1.671 H17 NF9 45 
NF9 H18 H18 H  0 1 N N N N N N -19.422 -19.105 1.509  -0.966 -1.150 2.528  H18 NF9 46 
NF9 H19 H19 H  0 1 N N N N N N -16.522 -18.689 -1.923 -5.483 0.997  -0.521 H19 NF9 47 
NF9 H20 H20 H  0 1 N N N N N N -14.739 -18.905 -1.885 -4.701 -0.563 -0.165 H20 NF9 48 
NF9 H21 H21 H  0 1 N N N N N N -15.283 -16.562 -1.596 -6.464 0.003  1.512  H21 NF9 49 
NF9 H22 H22 H  0 1 N N N N N N -16.393 -16.953 -0.239 -4.849 -0.106 2.254  H22 NF9 50 
NF9 H23 H23 H  0 1 N N N N N N -13.725 -17.854 2.000  -4.534 3.500  2.548  H23 NF9 51 
NF9 H24 H24 H  0 1 N N N N N N -15.505 -17.729 1.797  -3.713 1.953  2.864  H24 NF9 52 
NF9 H25 H25 H  0 1 N N N N N N -14.755 -20.066 1.739  -2.697 3.062  0.910  H25 NF9 53 
NF9 H26 H26 H  0 1 N N N N N N -13.662 -19.681 0.367  -4.290 3.156  0.119  H26 NF9 54 
NF9 H27 H27 H  0 1 N N N N N N -16.476 -23.133 -2.938 -0.490 2.966  -0.104 H27 NF9 55 
NF9 H28 H28 H  0 1 N N N N N N -15.571 -23.505 -1.432 -1.289 1.651  0.795  H28 NF9 56 
NF9 H29 H29 H  0 1 N N N N N N -17.589 -24.933 -1.708 0.277  0.010  -0.129 H29 NF9 57 
NF9 H30 H30 H  0 1 N N N N N N -17.660 -23.913 -0.231 1.205  1.342  0.601  H30 NF9 58 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
NF9 C2  C1  SING N N 1  
NF9 C1  N1  SING N N 2  
NF9 C1  O1  DOUB N N 3  
NF9 N1  C3  SING N N 4  
NF9 C3  C4  SING N N 5  
NF9 C7  C6  SING N N 6  
NF9 C7  N2  SING N N 7  
NF9 C20 N2  SING N N 8  
NF9 C20 C21 SING N N 9  
NF9 C5  C6  SING N N 10 
NF9 C5  C21 SING N N 11 
NF9 C5  C4  SING N N 12 
NF9 N2  C8  SING N N 13 
NF9 C16 C17 SING N N 14 
NF9 C16 C9  SING N N 15 
NF9 C17 O3  SING N N 16 
NF9 C8  O2  DOUB N N 17 
NF9 C8  C9  SING N N 18 
NF9 C9  N3  SING N N 19 
NF9 C9  C19 SING N N 20 
NF9 O3  C18 SING N N 21 
NF9 N3  C10 SING N N 22 
NF9 C19 C18 SING N N 23 
NF9 C10 C15 DOUB Y N 24 
NF9 C10 C11 SING Y N 25 
NF9 C15 C14 SING Y N 26 
NF9 C11 C12 DOUB Y N 27 
NF9 C14 C13 DOUB Y N 28 
NF9 C12 C13 SING Y N 29 
NF9 C13 CL2 SING N N 30 
NF9 C4  H1  SING N N 31 
NF9 C4  H2  SING N N 32 
NF9 C14 H3  SING N N 33 
NF9 C5  H4  SING N N 34 
NF9 C6  H5  SING N N 35 
NF9 C6  H6  SING N N 36 
NF9 C11 H7  SING N N 37 
NF9 C7  H8  SING N N 38 
NF9 C7  H9  SING N N 39 
NF9 N1  H10 SING N N 40 
NF9 N3  H11 SING N N 41 
NF9 C2  H12 SING N N 42 
NF9 C2  H13 SING N N 43 
NF9 C2  CL1 SING N N 44 
NF9 C3  H15 SING N N 45 
NF9 C3  H16 SING N N 46 
NF9 C12 H17 SING N N 47 
NF9 C15 H18 SING N N 48 
NF9 C16 H19 SING N N 49 
NF9 C16 H20 SING N N 50 
NF9 C17 H21 SING N N 51 
NF9 C17 H22 SING N N 52 
NF9 C18 H23 SING N N 53 
NF9 C18 H24 SING N N 54 
NF9 C19 H25 SING N N 55 
NF9 C19 H26 SING N N 56 
NF9 C20 H27 SING N N 57 
NF9 C20 H28 SING N N 58 
NF9 C21 H29 SING N N 59 
NF9 C21 H30 SING N N 60 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
NF9 InChI            InChI                1.06  "InChI=1S/C21H29Cl2N3O3/c22-15-19(27)24-10-5-16-6-11-26(12-7-16)20(28)21(8-13-29-14-9-21)25-18-3-1-17(23)2-4-18/h1-4,16,25H,5-15H2,(H,24,27)" 
NF9 InChIKey         InChI                1.06  CERKFXQSEPXGMS-UHFFFAOYSA-N                                                                                                                   
NF9 SMILES_CANONICAL CACTVS               3.385 "ClCC(=O)NCCC1CCN(CC1)C(=O)C2(CCOCC2)Nc3ccc(Cl)cc3"                                                                                           
NF9 SMILES           CACTVS               3.385 "ClCC(=O)NCCC1CCN(CC1)C(=O)C2(CCOCC2)Nc3ccc(Cl)cc3"                                                                                           
NF9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1NC2(CCOCC2)C(=O)N3CCC(CC3)CCNC(=O)CCl)Cl"                                                                                           
NF9 SMILES           "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1NC2(CCOCC2)C(=O)N3CCC(CC3)CCNC(=O)CCl)Cl"                                                                                           
# 
_pdbx_chem_comp_identifier.comp_id           NF9 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "2-chloranyl-~{N}-[2-[1-[4-[(4-chlorophenyl)amino]oxan-4-yl]carbonylpiperidin-4-yl]ethyl]ethanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
NF9 "Create component"  2022-08-17 PDBE 
NF9 "Initial release"   2023-09-20 RCSB 
NF9 "Modify descriptor" 2023-09-23 RCSB 
NF9 "Modify PCM"        2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            NF9 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C2 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
