data_XT8
# 
_chem_comp.id                                    XT8 
_chem_comp.name                                  "(2R,4S)-2-[(1R)-1-{[(2R)-2-carboxy-2-(thiophen-3-yl)acetyl]amino}-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C15 H18 N2 O6 S2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ticarcillin 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2019-10-15 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        386.443 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     XT8 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6UN3 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
XT8 C7  C1  C 0 1 N N N N N N -6.097  37.061 -17.073 0.692  -0.161 -2.065 C7  XT8 1  
XT8 O8  O1  O 0 1 N N N N N N -5.960  36.801 -15.887 -0.041 -1.105 -2.243 O8  XT8 2  
XT8 C6  C2  C 0 1 N N R N N N -6.171  38.468 -17.596 0.639  0.600  -0.765 C6  XT8 3  
XT8 C5  C3  C 0 1 N N R N N N -4.851  38.735 -18.311 2.006  0.535  -0.080 C5  XT8 4  
XT8 S1  S1  S 0 1 N N N N N N -4.183  40.374 -18.117 2.507  -1.208 0.237  S1  XT8 5  
XT8 C2  C4  C 0 1 N N N N N N -2.767  39.877 -17.168 4.311  -0.864 0.180  C2  XT8 6  
XT8 C10 C5  C 0 1 N N N N N N -1.537  39.902 -18.065 4.884  -0.755 1.594  C10 XT8 7  
XT8 C9  C6  C 0 1 N N N N N N -2.560  40.746 -15.950 5.041  -1.947 -0.617 C9  XT8 8  
XT8 C3  C7  C 0 1 N N S N N N -3.107  38.441 -16.687 4.395  0.493  -0.545 C3  XT8 9  
XT8 C11 C8  C 0 1 N N N N N N -1.886  37.681 -16.300 4.988  1.510  0.396  C11 XT8 10 
XT8 O12 O2  O 0 1 N N N N N N -1.513  36.859 -17.136 4.268  2.284  0.980  O12 XT8 11 
XT8 O13 O3  O 0 1 N N N N N N -1.284  37.869 -15.212 6.317  1.557  0.583  O13 XT8 12 
XT8 N4  N1  N 0 1 N N N N N N -3.842  37.761 -17.777 3.089  0.977  -1.002 N4  XT8 13 
XT8 N14 N2  N 0 1 N N N N N N -6.465  39.374 -16.510 -0.374 0.003  0.109  N14 XT8 14 
XT8 C15 C9  C 0 1 N N N N N N -7.213  40.447 -16.661 -1.666 0.369  -0.008 C15 XT8 15 
XT8 O16 O4  O 0 1 N N N N N N -7.715  40.682 -17.749 -1.990 1.192  -0.837 O16 XT8 16 
XT8 C17 C10 C 0 1 N N R N N N -7.486  41.292 -15.407 -2.707 -0.245 0.891  C17 XT8 17 
XT8 C33 C11 C 0 1 N N N N N N -8.828  41.905 -15.611 -2.732 -1.738 0.686  C33 XT8 18 
XT8 O33 O5  O 0 1 N N N N N N -9.826  41.169 -15.496 -3.588 -2.498 1.386  O33 XT8 19 
XT8 O32 O6  O 0 1 N N N N N N -8.921  43.060 -16.020 -1.980 -2.251 -0.109 O32 XT8 20 
XT8 C28 C12 C 0 1 Y N N N N N -6.358  42.180 -15.063 -4.060 0.330  0.559  C28 XT8 21 
XT8 C32 C13 C 0 1 Y N N N N N -5.883  42.169 -13.760 -4.613 0.211  -0.649 C32 XT8 22 
XT8 S31 S2  S 0 1 Y N N N N N -4.550  43.258 -13.682 -6.183 1.003  -0.660 S31 XT8 23 
XT8 C30 C14 C 0 1 Y N N N N N -4.659  43.726 -15.347 -5.996 1.464  1.027  C30 XT8 24 
XT8 C29 C15 C 0 1 Y N N N N N -5.708  43.043 -15.983 -4.826 1.016  1.485  C29 XT8 25 
XT8 H1  H1  H 0 1 N N N N N N -6.168  36.244 -17.776 1.388  0.135  -2.836 H1  XT8 26 
XT8 H2  H2  H 0 1 N N N N N N -6.980  38.520 -18.340 0.380  1.640  -0.963 H2  XT8 27 
XT8 H3  H3  H 0 1 N N N N N N -4.983  38.577 -19.392 2.010  1.119  0.840  H3  XT8 28 
XT8 H4  H4  H 0 1 N N N N N N -0.654  39.595 -17.486 4.743  -1.702 2.117  H4  XT8 29 
XT8 H5  H5  H 0 1 N N N N N N -1.683  39.208 -18.906 5.948  -0.526 1.539  H5  XT8 30 
XT8 H6  H6  H 0 1 N N N N N N -1.386  40.921 -18.452 4.369  0.038  2.135  H6  XT8 31 
XT8 H7  H7  H 0 1 N N N N N N -1.674  40.399 -15.398 4.636  -1.989 -1.628 H7  XT8 32 
XT8 H8  H8  H 0 1 N N N N N N -2.410  41.789 -16.265 6.104  -1.711 -0.661 H8  XT8 33 
XT8 H9  H9  H 0 1 N N N N N N -3.445  40.683 -15.300 4.903  -2.912 -0.130 H9  XT8 34 
XT8 H10 H10 H 0 1 N N N N N N -3.766  38.523 -15.810 5.052  0.390  -1.409 H10 XT8 35 
XT8 H11 H11 H 0 1 N N N N N N -0.532  37.291 -15.162 6.650  2.227  1.196  H11 XT8 36 
XT8 H12 H12 H 0 1 N N N N N N -4.305  36.949 -17.423 2.904  0.678  -1.948 H12 XT8 37 
XT8 H14 H14 H 0 1 N N N N N N -6.085  39.178 -15.606 -0.115 -0.656 0.773  H14 XT8 38 
XT8 H15 H15 H 0 1 N N N N N N -7.591  40.578 -14.577 -2.465 -0.025 1.931  H15 XT8 39 
XT8 H16 H16 H 0 1 N N N N N N -10.603 41.644 -15.766 -3.567 -3.450 1.220  H16 XT8 40 
XT8 H17 H17 H 0 1 N N N N N N -6.277  41.584 -12.942 -4.165 -0.294 -1.492 H17 XT8 41 
XT8 H18 H18 H 0 1 N N N N N N -4.010  44.443 -15.828 -6.719 2.021  1.604  H18 XT8 42 
XT8 H19 H19 H 0 1 N N N N N N -5.981  43.158 -17.022 -4.497 1.184  2.501  H19 XT8 43 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
XT8 C5  S1  SING N N 1  
XT8 C5  N4  SING N N 2  
XT8 C5  C6  SING N N 3  
XT8 S1  C2  SING N N 4  
XT8 C10 C2  SING N N 5  
XT8 N4  C3  SING N N 6  
XT8 O16 C15 DOUB N N 7  
XT8 C6  C7  SING N N 8  
XT8 C6  N14 SING N N 9  
XT8 C2  C3  SING N N 10 
XT8 C2  C9  SING N N 11 
XT8 O12 C11 DOUB N N 12 
XT8 C7  O8  DOUB N N 13 
XT8 C3  C11 SING N N 14 
XT8 C15 N14 SING N N 15 
XT8 C15 C17 SING N N 16 
XT8 C11 O13 SING N N 17 
XT8 O32 C33 DOUB N N 18 
XT8 C29 C30 DOUB Y N 19 
XT8 C29 C28 SING Y N 20 
XT8 C33 O33 SING N N 21 
XT8 C33 C17 SING N N 22 
XT8 C17 C28 SING N N 23 
XT8 C30 S31 SING Y N 24 
XT8 C28 C32 DOUB Y N 25 
XT8 C32 S31 SING Y N 26 
XT8 C7  H1  SING N N 27 
XT8 C6  H2  SING N N 28 
XT8 C5  H3  SING N N 29 
XT8 C10 H4  SING N N 30 
XT8 C10 H5  SING N N 31 
XT8 C10 H6  SING N N 32 
XT8 C9  H7  SING N N 33 
XT8 C9  H8  SING N N 34 
XT8 C9  H9  SING N N 35 
XT8 C3  H10 SING N N 36 
XT8 O13 H11 SING N N 37 
XT8 N4  H12 SING N N 38 
XT8 N14 H14 SING N N 39 
XT8 C17 H15 SING N N 40 
XT8 O33 H16 SING N N 41 
XT8 C32 H17 SING N N 42 
XT8 C30 H18 SING N N 43 
XT8 C29 H19 SING N N 44 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
XT8 SMILES           ACDLabs              12.01 "C(=O)C(NC(C(c1cscc1)C(O)=O)=O)C2SC(C(C(O)=O)N2)(C)C"                                                                                                                   
XT8 InChI            InChI                1.03  "InChI=1S/C15H18N2O6S2/c1-15(2)10(14(22)23)17-12(25-15)8(5-18)16-11(19)9(13(20)21)7-3-4-24-6-7/h3-6,8-10,12,17H,1-2H3,(H,16,19)(H,20,21)(H,22,23)/t8-,9-,10+,12-/m1/s1" 
XT8 InChIKey         InChI                1.03  GQZADNJRZOHJDT-MWGHHZFTSA-N                                                                                                                                             
XT8 SMILES_CANONICAL CACTVS               3.385 "CC1(C)S[C@@H](N[C@H]1C(O)=O)[C@H](NC(=O)[C@H](C(O)=O)c2cscc2)C=O"                                                                                                      
XT8 SMILES           CACTVS               3.385 "CC1(C)S[CH](N[CH]1C(O)=O)[CH](NC(=O)[CH](C(O)=O)c2cscc2)C=O"                                                                                                           
XT8 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1([C@@H](N[C@H](S1)[C@@H](C=O)NC(=O)[C@@H](c2ccsc2)C(=O)O)C(=O)O)C"                                                                                                  
XT8 SMILES           "OpenEye OEToolkits" 2.0.7 "CC1(C(NC(S1)C(C=O)NC(=O)C(c2ccsc2)C(=O)O)C(=O)O)C"                                                                                                                     
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
XT8 "SYSTEMATIC NAME" ACDLabs              12.01 "(2R,4S)-2-[(1R)-1-{[(2R)-2-carboxy-2-(thiophen-3-yl)acetyl]amino}-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid"                                          
XT8 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{R},4~{S})-5,5-dimethyl-2-[(1~{R})-2-oxidanylidene-1-[[(2~{R})-3-oxidanyl-3-oxidanylidene-2-thiophen-3-yl-propanoyl]amino]ethyl]-1,3-thiazolidine-4-carboxylic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
XT8 "Create component" 2019-10-15 RCSB 
XT8 "Initial release"  2019-10-30 RCSB 
XT8 "Modify synonyms"  2021-03-01 PDBE 
XT8 "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      XT8 
_pdbx_chem_comp_synonyms.name         ticarcillin 
_pdbx_chem_comp_synonyms.provenance   ? 
_pdbx_chem_comp_synonyms.type         ? 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            XT8 
_pdbx_chem_comp_pcm.modified_residue_id                SER 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C7 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   OG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
