data_UD8
#

_chem_comp.id                                   UD8
_chem_comp.name                                 "N-((1-(6-((3aR,7R,7aS)-7-hydroxy-2,2-dimethyltetrahydro-[1,3]dioxolo[4,5-c]pyridin-5(4H)-yl)hexyl)-1H-1,2,3-triazol-4-yl)methyl)-4-sulfamoylbenzamide"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C24 H36 N6 O6 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "~{N}-[[1-[6-[(3~{a}~{S},7~{R},7~{a}~{S})-2,2-dimethyl-7-oxidanyl-4,6,7,7~{a}-tetrahydro-3~{a}~{H}-[1,3]dioxolo[4,5-c]pyridin-5-yl]hexyl]-1,2,3-triazol-4-yl]methyl]-4-sulfamoyl-benzamide"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-02-10
_chem_comp.pdbx_modified_date                   2022-02-18
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       536.644
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    UD8
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7NH8
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBE
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
UD8  O5   O1   O  0  1  N  N  N  -4.398   6.554  13.697    6.785  -2.997  -1.061  O5   UD8   1  
UD8  C17  C1   C  0  1  N  N  N  -3.716   5.558  13.917    6.593  -1.912  -0.548  C17  UD8   2  
UD8  C18  C2   C  0  1  Y  N  N  -4.261   4.410  14.691    7.720  -0.974  -0.357  C18  UD8   3  
UD8  C23  C3   C  0  1  Y  N  N  -5.628   4.362  14.947    9.006  -1.332  -0.765  C23  UD8   4  
UD8  C22  C4   C  0  1  Y  N  N  -6.196   3.291  15.629   10.053  -0.452  -0.583  C22  UD8   5  
UD8  C21  C5   C  0  1  Y  N  N  -5.378   2.264  16.106    9.831   0.782   0.002  C21  UD8   6  
UD8  S    S1   S  0  1  N  N  N  -6.031   0.857  16.969   11.175   1.899   0.230  S    UD8   7  
UD8  O4   O2   O  0  1  N  N  N  -5.458   0.930  18.304   12.354   1.107   0.256  O4   UD8   8  
UD8  N3   N1   N  0  1  N  N  N  -5.448  -0.480  16.271   11.270   2.835  -1.133  N3   UD8   9  
UD8  O3   O3   O  0  1  N  N  N  -7.463   0.945  16.796   10.798   2.768   1.289  O3   UD8  10  
UD8  C20  C6   C  0  1  Y  N  N  -4.006   2.349  15.899    8.559   1.143   0.408  C20  UD8  11  
UD8  C19  C7   C  0  1  Y  N  N  -3.468   3.410  15.177    7.502   0.275   0.227  C19  UD8  12  
UD8  N2   N2   N  0  1  N  N  N  -2.482   5.446  13.444    5.351  -1.561  -0.158  N2   UD8  13  
UD8  C16  C8   C  0  1  N  N  N  -2.037   6.406  12.466    4.233  -2.487  -0.353  C16  UD8  14  
UD8  C15  C9   C  0  1  Y  N  N  -1.304   7.505  13.150    2.964  -1.860   0.164  C15  UD8  15  
UD8  C14  C10  C  0  1  Y  N  N  -1.744   8.461  14.004    2.049  -1.171  -0.558  C14  UD8  16  
UD8  N4   N3   N  0  1  Y  N  N   0.035   7.657  12.997    2.518  -1.878   1.425  N4   UD8  17  
UD8  N5   N4   N  0  1  Y  N  N   0.435   8.667  13.724    1.403  -1.239   1.482  N5   UD8  18  
UD8  N1   N5   N  0  1  Y  N  N  -0.651   9.168  14.327    1.085  -0.798   0.315  N1   UD8  19  
UD8  C13  C11  C  0  1  N  N  N  -0.555  10.430  15.045   -0.118  -0.028  -0.013  C13  UD8  20  
UD8  C12  C12  C  0  1  N  N  N  -1.200  11.559  14.238   -1.357  -0.796   0.449  C12  UD8  21  
UD8  C11  C13  C  0  1  N  N  N  -0.319  12.019  13.067   -2.613   0.008   0.107  C11  UD8  22  
UD8  C10  C14  C  0  1  N  N  N  -1.358  11.656  11.560   -3.853  -0.760   0.568  C10  UD8  23  
UD8  C9   C15  C  0  1  N  N  N  -2.636  10.777  11.629   -5.108   0.044   0.226  C9   UD8  24  
UD8  C8   C16  C  0  1  N  N  N  -2.894   9.880  10.402   -6.348  -0.725   0.688  C8   UD8  25  
UD8  N    N6   N  0  1  N  N  N  -4.285   9.403  10.221   -7.554   0.048   0.359  N    UD8  26  
UD8  C7   C17  C  0  1  N  N  N  -4.814   8.139  11.014   -7.730   0.155  -1.090  C7   UD8  27  
UD8  C    C18  C  0  1  N  N  R  -6.080   7.340  10.755   -8.967   0.994  -1.452  C    UD8  28  
UD8  O    O4   O  0  1  N  N  N  -6.545   6.684  11.955   -9.158   0.992  -2.868  O    UD8  29  
UD8  C6   C19  C  0  1  N  N  N  -5.255  10.432  10.589   -8.736  -0.493   1.059  C6   UD8  30  
UD8  C5   C20  C  0  1  N  N  S  -6.492   9.680   9.830   -9.897   0.436   0.762  C5   UD8  31  
UD8  C1   C21  C  0  1  N  N  S  -7.073   8.288  10.115  -10.157   0.351  -0.769  C1   UD8  32  
UD8  O2   O5   O  0  1  N  N  N  -7.193  10.659   9.151  -11.181   0.058   1.260  O2   UD8  33  
UD8  C2   C22  C  0  1  N  N  N  -6.968   9.798   8.035  -12.095   0.751   0.371  C2   UD8  34  
UD8  O1   O6   O  0  1  N  N  N  -6.933   8.463   8.580  -11.419   0.993  -0.885  O1   UD8  35  
UD8  C4   C23  C  0  1  N  N  N  -5.635  10.140   7.409  -12.511   2.084   0.998  C4   UD8  36  
UD8  C3   C24  C  0  1  N  N  N  -8.126   9.932   7.077  -13.335  -0.113   0.131  C3   UD8  37  
UD8  H1   H1   H  0  1  N  N  N  -6.259   5.171  14.610    9.181  -2.295  -1.221  H1   UD8  38  
UD8  H2   H2   H  0  1  N  N  N  -7.263   3.254  15.789   11.049  -0.728  -0.899  H2   UD8  39  
UD8  H3   H3   H  0  1  N  N  N  -5.805  -1.286  16.743   11.604   3.744  -1.074  H3   UD8  40  
UD8  H4   H4   H  0  1  N  N  N  -5.729  -0.505  15.312   10.992   2.475  -1.989  H4   UD8  41  
UD8  H5   H5   H  0  1  N  N  N  -3.354   1.587  16.301    8.392   2.107   0.863  H5   UD8  42  
UD8  H6   H6   H  0  1  N  N  N  -2.404   3.443  14.998    6.508   0.559   0.540  H6   UD8  43  
UD8  H7   H7   H  0  1  N  N  N  -1.876   4.715  13.758    5.198  -0.695   0.252  H7   UD8  44  
UD8  H8   H8   H  0  1  N  N  N  -1.369   5.912  11.745    4.124  -2.707  -1.415  H8   UD8  45  
UD8  H9   H9   H  0  1  N  N  N  -2.907   6.820  11.936    4.429  -3.412   0.191  H9   UD8  46  
UD8  H10  H10  H  0  1  N  N  N  -2.755   8.619  14.349    2.082  -0.962  -1.617  H10  UD8  47  
UD8  H11  H11  H  0  1  N  N  N  -1.071  10.336  16.012   -0.079   0.938   0.493  H11  UD8  48  
UD8  H12  H12  H  0  1  N  N  N   0.505  10.668  15.217   -0.167   0.128  -1.090  H12  UD8  49  
UD8  H13  H13  H  0  1  N  N  N  -2.161  11.203  13.838   -1.395  -1.761  -0.056  H13  UD8  50  
UD8  H14  H14  H  0  1  N  N  N  -1.375  12.415  14.906   -1.308  -0.952   1.527  H14  UD8  51  
UD8  H15  H15  H  0  1  N  N  N  -0.098  13.094  13.141   -2.575   0.973   0.612  H15  UD8  52  
UD8  H16  H16  H  0  1  N  N  N   0.623  11.452  13.039   -2.662   0.164  -0.971  H16  UD8  53  
UD8  H17  H17  H  0  1  N  N  N  -0.689  11.168  10.836   -3.891  -1.725   0.063  H17  UD8  54  
UD8  H18  H18  H  0  1  N  N  N  -1.677  12.632  11.165   -3.803  -0.916   1.646  H18  UD8  55  
UD8  H19  H19  H  0  1  N  N  N  -2.552  10.127  12.512   -5.070   1.009   0.732  H19  UD8  56  
UD8  H20  H20  H  0  1  N  N  N  -3.501  11.446  11.747   -5.158   0.200  -0.851  H20  UD8  57  
UD8  H21  H21  H  0  1  N  N  N  -2.616  10.451   9.504   -6.386  -1.690   0.183  H21  UD8  58  
UD8  H22  H22  H  0  1  N  N  N  -2.245   8.996  10.490   -6.299  -0.880   1.765  H22  UD8  59  
UD8  H24  H24  H  0  1  N  N  N  -4.000   7.403  10.942   -6.845   0.622  -1.522  H24  UD8  60  
UD8  H25  H25  H  0  1  N  N  N  -4.908   8.482  12.055   -7.843  -0.845  -1.509  H25  UD8  61  
UD8  H26  H26  H  0  1  N  N  N  -5.835   6.567  10.011   -8.840   2.016  -1.096  H26  UD8  62  
UD8  H27  H27  H  0  1  N  N  N  -5.831   6.621  12.579   -8.415   1.358  -3.366  H27  UD8  63  
UD8  H28  H28  H  0  1  N  N  N  -5.402  10.523  11.675   -8.959  -1.495   0.692  H28  UD8  64  
UD8  H29  H29  H  0  1  N  N  N  -5.022  11.421  10.167   -8.550  -0.524   2.133  H29  UD8  65  
UD8  H30  H30  H  0  1  N  N  N  -5.889   9.360   8.967   -9.649   1.457   1.052  H30  UD8  66  
UD8  H31  H31  H  0  1  N  N  N  -8.101   8.261  10.504  -10.239  -0.693  -1.073  H31  UD8  67  
UD8  H32  H32  H  0  1  N  N  N  -5.454   9.480   6.548  -11.624   2.690   1.184  H32  UD8  68  
UD8  H33  H33  H  0  1  N  N  N  -5.646  11.187   7.073  -13.177   2.613   0.317  H33  UD8  69  
UD8  H34  H34  H  0  1  N  N  N  -4.835  10.001   8.151  -13.028   1.897   1.939  H34  UD8  70  
UD8  H35  H35  H  0  1  N  N  N  -7.965   9.273   6.211  -13.846  -0.285   1.078  H35  UD8  71  
UD8  H36  H36  H  0  1  N  N  N  -9.058   9.646   7.587  -14.007   0.400  -0.556  H36  UD8  72  
UD8  H37  H37  H  0  1  N  N  N  -8.200  10.975   6.735  -13.034  -1.068  -0.299  H37  UD8  73  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
UD8  O5   C17  DOUB  N  N   1  
UD8  C17  C18  SING  N  N   2  
UD8  C17  N2   SING  N  N   3  
UD8  C18  C23  DOUB  Y  N   4  
UD8  C18  C19  SING  Y  N   5  
UD8  C23  C22  SING  Y  N   6  
UD8  C22  C21  DOUB  Y  N   7  
UD8  C21  S    SING  N  N   8  
UD8  C21  C20  SING  Y  N   9  
UD8  S    O4   DOUB  N  N  10  
UD8  S    N3   SING  N  N  11  
UD8  S    O3   DOUB  N  N  12  
UD8  C20  C19  DOUB  Y  N  13  
UD8  N2   C16  SING  N  N  14  
UD8  C16  C15  SING  N  N  15  
UD8  C15  C14  DOUB  Y  N  16  
UD8  C15  N4   SING  Y  N  17  
UD8  C14  N1   SING  Y  N  18  
UD8  N4   N5   DOUB  Y  N  19  
UD8  N5   N1   SING  Y  N  20  
UD8  N1   C13  SING  N  N  21  
UD8  C13  C12  SING  N  N  22  
UD8  C12  C11  SING  N  N  23  
UD8  C10  C9   SING  N  N  24  
UD8  C9   C8   SING  N  N  25  
UD8  C8   N    SING  N  N  26  
UD8  N    C7   SING  N  N  27  
UD8  N    C6   SING  N  N  28  
UD8  C7   C    SING  N  N  29  
UD8  C    O    SING  N  N  30  
UD8  C    C1   SING  N  N  31  
UD8  C6   C5   SING  N  N  32  
UD8  C5   C1   SING  N  N  33  
UD8  C5   O2   SING  N  N  34  
UD8  C1   O1   SING  N  N  35  
UD8  O2   C2   SING  N  N  36  
UD8  C2   O1   SING  N  N  37  
UD8  C2   C4   SING  N  N  38  
UD8  C2   C3   SING  N  N  39  
UD8  C11  C10  SING  N  N  40  
UD8  C23  H1   SING  N  N  41  
UD8  C22  H2   SING  N  N  42  
UD8  N3   H3   SING  N  N  43  
UD8  N3   H4   SING  N  N  44  
UD8  C20  H5   SING  N  N  45  
UD8  C19  H6   SING  N  N  46  
UD8  N2   H7   SING  N  N  47  
UD8  C16  H8   SING  N  N  48  
UD8  C16  H9   SING  N  N  49  
UD8  C14  H10  SING  N  N  50  
UD8  C13  H11  SING  N  N  51  
UD8  C13  H12  SING  N  N  52  
UD8  C12  H13  SING  N  N  53  
UD8  C12  H14  SING  N  N  54  
UD8  C11  H15  SING  N  N  55  
UD8  C11  H16  SING  N  N  56  
UD8  C10  H17  SING  N  N  57  
UD8  C10  H18  SING  N  N  58  
UD8  C9   H19  SING  N  N  59  
UD8  C9   H20  SING  N  N  60  
UD8  C8   H21  SING  N  N  61  
UD8  C8   H22  SING  N  N  62  
UD8  C7   H24  SING  N  N  63  
UD8  C7   H25  SING  N  N  64  
UD8  C    H26  SING  N  N  65  
UD8  O    H27  SING  N  N  66  
UD8  C6   H28  SING  N  N  67  
UD8  C6   H29  SING  N  N  68  
UD8  C5   H30  SING  N  N  69  
UD8  C1   H31  SING  N  N  70  
UD8  C4   H32  SING  N  N  71  
UD8  C4   H33  SING  N  N  72  
UD8  C4   H34  SING  N  N  73  
UD8  C3   H35  SING  N  N  74  
UD8  C3   H36  SING  N  N  75  
UD8  C3   H37  SING  N  N  76  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
UD8  InChI             InChI                 1.03   "InChI=1S/C24H36N6O6S/c1-24(2)35-21-16-29(15-20(31)22(21)36-24)11-5-3-4-6-12-30-14-18(27-28-30)13-26-23(32)17-7-9-19(10-8-17)37(25,33)34/h7-10,14,20-22,31H,3-6,11-13,15-16H2,1-2H3,(H,26,32)(H2,25,33,34)/t20-,21+,22+/m1/s1"  
UD8  InChIKey          InChI                 1.03   YZQOVKMHWZRLSA-FSSWDIPSSA-N  
UD8  SMILES_CANONICAL  CACTVS                3.385  "CC1(C)O[C@H]2CN(CCCCCCn3cc(CNC(=O)c4ccc(cc4)[S](N)(=O)=O)nn3)C[C@@H](O)[C@@H]2O1"  
UD8  SMILES            CACTVS                3.385  "CC1(C)O[CH]2CN(CCCCCCn3cc(CNC(=O)c4ccc(cc4)[S](N)(=O)=O)nn3)C[CH](O)[CH]2O1"  
UD8  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CC1(O[C@H]2CN(C[C@H]([C@@H]2O1)O)CCCCCCn3cc(nn3)CNC(=O)c4ccc(cc4)S(=O)(=O)N)C"  
UD8  SMILES            "OpenEye OEToolkits"  2.0.7  "CC1(OC2CN(CC(C2O1)O)CCCCCCn3cc(nn3)CNC(=O)c4ccc(cc4)S(=O)(=O)N)C"  
#
_pdbx_chem_comp_identifier.comp_id          UD8
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "~{N}-[[1-[6-[(3~{a}~{S},7~{R},7~{a}~{S})-2,2-dimethyl-7-oxidanyl-4,6,7,7~{a}-tetrahydro-3~{a}~{H}-[1,3]dioxolo[4,5-c]pyridin-5-yl]hexyl]-1,2,3-triazol-4-yl]methyl]-4-sulfamoyl-benzamide"
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     UD8
_pdbx_chem_comp_synonyms.name        "~{N}-[[1-[6-[(3~{a}~{S},7~{R},7~{a}~{S})-2,2-dimethyl-7-oxidanyl-4,6,7,7~{a}-tetrahydro-3~{a}~{H}-[1,3]dioxolo[4,5-c]pyridin-5-yl]hexyl]-1,2,3-triazol-4-yl]methyl]-4-sulfamoyl-benzamide"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
UD8  "Create component"  2021-02-10  PDBE  
UD8  "Initial release"   2022-02-23  RCSB  
##
