data_AC8
# 
_chem_comp.id                                    AC8 
_chem_comp.name                                  "[(2R,3R,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-bis(phosphonooxy)tetrahydrofuran-2-yl]methyl (3R)-3-hydroxy-2,2-dimethyl-4-oxo-4-({3-oxo-3-[(2-sulfanylethyl)amino]propyl}amino)butyl dihydrogen diphosphate" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C21 H37 N7 O19 P4 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2013-10-01 
_chem_comp.pdbx_modified_date                    2013-11-01 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        847.514 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     AC8 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4MY0 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
AC8 N1A  N1A  N 0 1 Y N N 3.455  35.372 35.770 7.009   -6.014 -1.370 N1A  AC8 1  
AC8 O1A  O1A  O 0 1 N N N 5.304  45.351 33.683 1.258   4.135  -1.019 O1A  AC8 2  
AC8 P1A  P1A  P 0 1 N N N 4.974  44.308 34.740 0.993   2.790  -1.575 P1A  AC8 3  
AC8 C1B  C1B  C 0 1 N N R 2.313  40.131 34.265 4.700   -1.531 -0.124 C1B  AC8 4  
AC8 S1P  S1P  S 0 1 N N N 11.666 36.675 29.045 -14.864 -5.183 0.727  S1P  AC8 5  
AC8 C2A  C2A  C 0 1 Y N N 2.293  35.843 35.280 6.629   -5.584 -0.180 C2A  AC8 6  
AC8 O2A  O2A  O 0 1 N N N 4.810  44.777 36.158 1.359   2.774  -3.143 O2A  AC8 7  
AC8 P2A  P2A  P 0 1 N N N 7.445  43.002 35.434 -1.937  3.234  -1.619 P2A  AC8 8  
AC8 C2B  C2B  C 0 1 N N R 1.759  41.201 35.178 5.823   -0.707 0.534  C2B  AC8 9  
AC8 O2B  O2B  O 0 1 N N N 0.699  40.663 35.979 5.922   -1.018 1.925  O2B  AC8 10 
AC8 O2C  O2C  O 0 1 N N N 0.234  42.700 37.367 7.705   -2.804 1.887  O2C  AC8 11 
AC8 C2P  C2P  C 0 1 N N N 11.456 37.259 30.763 -13.883 -3.927 -0.139 C2P  AC8 12 
AC8 N3A  N3A  N 0 1 Y N N 2.173  37.135 34.940 6.050   -4.415 -0.004 N3A  AC8 13 
AC8 O3A  O3A  O 0 1 N N N 6.084  43.166 34.591 -0.564  2.427  -1.383 O3A  AC8 14 
AC8 C3B  C3B  C 0 1 N N R 1.267  42.241 34.166 5.381   0.763  0.337  C3B  AC8 15 
AC8 O3B  O3B  O 0 1 N N N 0.016  41.805 33.623 5.640   1.536  1.511  O3B  AC8 16 
AC8 P3B  P3B  P 0 1 N N N -1.447 42.361 34.058 6.608   2.822  1.519  P3B  AC8 17 
AC8 O3C  O3C  O 0 1 N N N 1.667  40.834 38.254 8.424   -0.468 2.519  O3C  AC8 18 
AC8 C3P  C3P  C 0 1 N N N 12.796 36.907 31.369 -12.890 -3.292 0.837  C3P  AC8 19 
AC8 C4A  C4A  C 0 1 Y N N 3.233  37.976 35.086 5.821   -3.610 -1.036 C4A  AC8 20 
AC8 O4A  O4A  O 0 1 N N N 7.179  42.048 36.562 -2.313  3.209  -3.184 O4A  AC8 21 
AC8 C4B  C4B  C 0 1 N N R 2.236  42.130 33.004 3.857   0.614  0.097  C4B  AC8 22 
AC8 O4B  O4B  O 0 1 N N N 2.851  40.844 33.142 3.755   -0.600 -0.678 O4B  AC8 23 
AC8 O4C  O4C  O 0 1 N N N -0.808 40.455 37.943 6.980   -1.944 4.147  O4C  AC8 24 
AC8 P4C  P4C  P 0 1 N N N 0.423  41.205 37.492 7.267   -1.585 2.604  P4C  AC8 25 
AC8 N4P  N4P  N 0 1 N N N 12.994 37.200 32.786 -12.099 -2.277 0.137  N4P  AC8 26 
AC8 C5A  C5A  C 0 1 Y N N 4.440  37.506 35.581 6.207   -4.022 -2.322 C5A  AC8 27 
AC8 O5A  O5A  O 0 1 N N N 8.032  44.371 35.704 -1.768  4.636  -1.175 O5A  AC8 28 
AC8 C5B  C5B  C 0 1 N N N 3.311  43.212 33.018 3.317   1.806  -0.696 C5B  AC8 29 
AC8 O5B  O5B  O 0 1 N N N 3.652  43.477 34.374 1.895   1.703  -0.803 O5B  AC8 30 
AC8 C5P  C5P  C 0 1 N N N 12.470 36.600 33.849 -11.154 -1.583 0.802  C5P  AC8 31 
AC8 O5P  O5P  O 0 1 N N N 11.637 35.708 33.731 -10.960 -1.798 1.980  O5P  AC8 32 
AC8 C6A  C6A  C 0 1 Y N N 4.540  36.163 35.927 6.822   -5.278 -2.460 C6A  AC8 33 
AC8 N6A  N6A  N 0 1 N N N 5.699  35.657 36.422 7.224   -5.737 -3.702 N6A  AC8 34 
AC8 O6A  O6A  O 0 1 N N N 8.360  42.235 34.362 -3.119  2.542  -0.772 O6A  AC8 35 
AC8 C6P  C6P  C 0 1 N N N 12.981 37.077 35.189 -10.340 -0.539 0.082  C6P  AC8 36 
AC8 N7A  N7A  N 0 1 Y N N 5.305  38.548 35.628 5.864   -3.030 -3.179 N7A  AC8 37 
AC8 O7A  O7A  O 0 1 N N N -2.384 41.371 33.400 7.936   2.443  0.985  O7A  AC8 38 
AC8 C7P  C7P  C 0 1 N N N 11.966 37.053 36.341 -9.347  0.096  1.058  C7P  AC8 39 
AC8 C8A  C8A  C 0 1 Y N N 4.646  39.639 35.160 5.305   -2.059 -2.517 C8A  AC8 40 
AC8 O8A  O8A  O 0 1 N N N -1.503 43.760 33.477 5.970   3.979  0.599  O8A  AC8 41 
AC8 N8P  N8P  N 0 1 N N N 10.933 38.047 36.036 -8.555  1.110  0.359  N8P  AC8 42 
AC8 N9A  N9A  N 0 1 Y N N 3.383  39.282 34.847 5.256   -2.369 -1.190 N9A  AC8 43 
AC8 O9A  O9A  O 0 1 N N N -1.520 42.316 35.566 6.770   3.362  3.026  O9A  AC8 44 
AC8 C9P  C9P  C 0 1 N N N 11.093 39.338 35.752 -7.611  1.805  1.024  C9P  AC8 45 
AC8 O9P  O9P  O 0 1 N N N 12.206 39.838 35.742 -7.479  1.657  2.220  O9P  AC8 46 
AC8 CAP  CAP  C 0 1 N N R 9.871  40.192 35.459 -6.718  2.765  0.281  CAP  AC8 47 
AC8 OAP  OAP  O 0 1 N N N 8.806  39.838 36.343 -7.233  2.971  -1.036 OAP  AC8 48 
AC8 CBP  CBP  C 0 1 N N N 9.345  40.065 34.023 -5.306  2.184  0.191  CBP  AC8 49 
AC8 CCP  CCP  C 0 1 N N N 8.065  40.909 33.912 -4.438  3.085  -0.689 CCP  AC8 50 
AC8 CDP  CDP  C 0 1 N N N 10.377 40.593 33.032 -4.698  2.101  1.593  CDP  AC8 51 
AC8 CEP  CEP  C 0 1 N N N 9.006  38.624 33.678 -5.369  0.782  -0.420 CEP  AC8 52 
AC8 H1B  H1B  H 0 1 N N N 1.485  39.487 33.934 4.213   -2.157 0.623  H1B  AC8 53 
AC8 HS1P HS1P H 0 0 N N N 10.517 36.974 28.516 -15.679 -5.648 -0.236 HS1P AC8 54 
AC8 H2A  H2A  H 0 1 N N N 1.452  35.176 35.160 6.801   -6.214 0.680  H2A  AC8 55 
AC8 HO2A HO2A H 0 0 N N N 4.943  45.717 36.199 1.209   1.922  -3.573 HO2A AC8 56 
AC8 H2B  H2B  H 0 1 N N N 2.560  41.627 35.800 6.774   -0.891 0.034  H2B  AC8 57 
AC8 H2P  H2P  H 0 1 N N N 11.271 38.343 30.799 -13.338 -4.393 -0.960 H2P  AC8 58 
AC8 H2PA H2PA H 0 0 N N N 10.635 36.730 31.269 -14.546 -3.157 -0.535 H2PA AC8 59 
AC8 H3B  H3B  H 0 1 N N N 1.238  43.254 34.593 5.870   1.204  -0.532 H3B  AC8 60 
AC8 HO3C HO3C H 0 0 N N N 2.120  41.624 38.526 8.205   0.359  2.968  HO3C AC8 61 
AC8 H3P  H3P  H 0 1 N N N 12.945 35.826 31.232 -13.436 -2.826 1.657  H3P  AC8 62 
AC8 H3PA H3PA H 0 0 N N N 13.566 37.457 30.808 -12.227 -4.062 1.232  H3PA AC8 63 
AC8 HO4A HO4A H 0 0 N N N 7.432  42.451 37.384 -2.439  2.320  -3.544 HO4A AC8 64 
AC8 H4B  H4B  H 0 1 N N N 1.677  42.189 32.059 3.327   0.513  1.044  H4B  AC8 65 
AC8 HO4C HO4C H 0 0 N N N -1.521 41.068 38.078 7.748   -2.292 4.619  HO4C AC8 66 
AC8 HN4P HN4P H 0 0 N N N 13.612 37.961 32.984 -12.254 -2.105 -0.805 HN4P AC8 67 
AC8 H5B  H5B  H 0 1 N N N 4.199  42.863 32.471 3.576   2.732  -0.182 H5B  AC8 68 
AC8 H5BA H5BA H 0 0 N N N 2.926  44.127 32.545 3.757   1.808  -1.693 H5BA AC8 69 
AC8 HN6A HN6A H 0 0 N N N 5.581  34.684 36.620 7.647   -6.606 -3.784 HN6A AC8 70 
AC8 HN6B HN6B H 0 0 N N N 6.428  35.774 35.748 7.082   -5.191 -4.491 HN6B AC8 71 
AC8 H6P  H6P  H 0 1 N N N 13.829 36.437 35.474 -9.795  -1.005 -0.738 H6P  AC8 72 
AC8 H6PA H6PA H 0 0 N N N 13.329 38.114 35.068 -11.003 0.230  -0.313 H6PA AC8 73 
AC8 H7P  H7P  H 0 1 N N N 11.514 36.054 36.423 -9.892  0.562  1.879  H7P  AC8 74 
AC8 H7PA H7PA H 0 0 N N N 12.465 37.308 37.287 -8.684  -0.674 1.454  H7PA AC8 75 
AC8 H8A  H8A  H 0 1 N N N 5.064  40.629 35.055 4.936   -1.143 -2.953 H8A  AC8 76 
AC8 HO8A HO8A H 0 0 N N N -2.139 43.785 32.772 5.098   4.277  0.891  HO8A AC8 77 
AC8 HN8P HN8P H 0 0 N N N 9.990  37.714 36.042 -8.711  1.283  -0.583 HN8P AC8 78 
AC8 HO9A HO9A H 0 0 N N N -2.154 41.661 35.833 7.342   4.138  3.107  HO9A AC8 79 
AC8 HAP  HAP  H 0 1 N N N 10.144 41.244 35.625 -6.686  3.717  0.811  HAP  AC8 80 
AC8 HOAP HOAP H 0 0 N N N 8.046  40.375 36.155 -7.289  2.165  -1.567 HOAP AC8 81 
AC8 HCP  HCP  H 0 1 N N N 7.275  40.471 34.539 -4.393  4.083  -0.253 HCP  AC8 82 
AC8 HCPA HCPA H 0 0 N N N 7.728  40.938 32.865 -4.870  3.144  -1.687 HCPA AC8 83 
AC8 HDP  HDP  H 0 1 N N N 9.986  40.496 32.008 -5.272  1.398  2.197  HDP  AC8 84 
AC8 HDPA HDPA H 0 0 N N N 10.583 41.652 33.247 -3.665  1.761  1.522  HDPA AC8 85 
AC8 HDPB HDPB H 0 0 N N N 11.306 40.012 33.126 -4.725  3.086  2.059  HDPB AC8 86 
AC8 HEP  HEP  H 0 1 N N N 8.633  38.572 32.644 -5.802  0.841  -1.419 HEP  AC8 87 
AC8 HEPA HEPA H 0 0 N N N 9.908  38.002 33.774 -4.363  0.368  -0.484 HEPA AC8 88 
AC8 HEPB HEPB H 0 0 N N N 8.231  38.255 34.366 -5.987  0.140  0.207  HEPB AC8 89 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
AC8 C2A N1A  DOUB Y N 1  
AC8 N1A C6A  SING Y N 2  
AC8 O1A P1A  DOUB N N 3  
AC8 O5B P1A  SING N N 4  
AC8 O3A P1A  SING N N 5  
AC8 P1A O2A  SING N N 6  
AC8 O4B C1B  SING N N 7  
AC8 C1B N9A  SING N N 8  
AC8 C1B C2B  SING N N 9  
AC8 C1B H1B  SING N N 10 
AC8 S1P C2P  SING N N 11 
AC8 S1P HS1P SING N N 12 
AC8 N3A C2A  SING Y N 13 
AC8 C2A H2A  SING N N 14 
AC8 O2A HO2A SING N N 15 
AC8 O6A P2A  SING N N 16 
AC8 O3A P2A  SING N N 17 
AC8 P2A O5A  DOUB N N 18 
AC8 P2A O4A  SING N N 19 
AC8 C3B C2B  SING N N 20 
AC8 C2B O2B  SING N N 21 
AC8 C2B H2B  SING N N 22 
AC8 O2B P4C  SING N N 23 
AC8 O2C P4C  DOUB N N 24 
AC8 C2P C3P  SING N N 25 
AC8 C2P H2P  SING N N 26 
AC8 C2P H2PA SING N N 27 
AC8 N3A C4A  DOUB Y N 28 
AC8 C4B C3B  SING N N 29 
AC8 O3B C3B  SING N N 30 
AC8 C3B H3B  SING N N 31 
AC8 O3B P3B  SING N N 32 
AC8 O7A P3B  DOUB N N 33 
AC8 O8A P3B  SING N N 34 
AC8 P3B O9A  SING N N 35 
AC8 P4C O3C  SING N N 36 
AC8 O3C HO3C SING N N 37 
AC8 C3P N4P  SING N N 38 
AC8 C3P H3P  SING N N 39 
AC8 C3P H3PA SING N N 40 
AC8 N9A C4A  SING Y N 41 
AC8 C4A C5A  SING Y N 42 
AC8 O4A HO4A SING N N 43 
AC8 C4B C5B  SING N N 44 
AC8 C4B O4B  SING N N 45 
AC8 C4B H4B  SING N N 46 
AC8 P4C O4C  SING N N 47 
AC8 O4C HO4C SING N N 48 
AC8 N4P C5P  SING N N 49 
AC8 N4P HN4P SING N N 50 
AC8 C5A N7A  SING Y N 51 
AC8 C5A C6A  DOUB Y N 52 
AC8 C5B O5B  SING N N 53 
AC8 C5B H5B  SING N N 54 
AC8 C5B H5BA SING N N 55 
AC8 O5P C5P  DOUB N N 56 
AC8 C5P C6P  SING N N 57 
AC8 C6A N6A  SING N N 58 
AC8 N6A HN6A SING N N 59 
AC8 N6A HN6B SING N N 60 
AC8 CCP O6A  SING N N 61 
AC8 C6P C7P  SING N N 62 
AC8 C6P H6P  SING N N 63 
AC8 C6P H6PA SING N N 64 
AC8 C8A N7A  DOUB Y N 65 
AC8 N8P C7P  SING N N 66 
AC8 C7P H7P  SING N N 67 
AC8 C7P H7PA SING N N 68 
AC8 N9A C8A  SING Y N 69 
AC8 C8A H8A  SING N N 70 
AC8 O8A HO8A SING N N 71 
AC8 C9P N8P  SING N N 72 
AC8 N8P HN8P SING N N 73 
AC8 O9A HO9A SING N N 74 
AC8 CAP C9P  SING N N 75 
AC8 O9P C9P  DOUB N N 76 
AC8 CBP CAP  SING N N 77 
AC8 CAP OAP  SING N N 78 
AC8 CAP HAP  SING N N 79 
AC8 OAP HOAP SING N N 80 
AC8 CDP CBP  SING N N 81 
AC8 CEP CBP  SING N N 82 
AC8 CCP CBP  SING N N 83 
AC8 CCP HCP  SING N N 84 
AC8 CCP HCPA SING N N 85 
AC8 CDP HDP  SING N N 86 
AC8 CDP HDPA SING N N 87 
AC8 CDP HDPB SING N N 88 
AC8 CEP HEP  SING N N 89 
AC8 CEP HEPA SING N N 90 
AC8 CEP HEPB SING N N 91 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
AC8 SMILES           ACDLabs              12.01 "O=C(NCCS)CCNC(=O)C(O)C(C)(C)COP(=O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(OP(=O)(O)O)C3OP(=O)(O)O" 
AC8 InChI            InChI                1.03  
;InChI=1S/C21H37N7O19P4S/c1-21(2,16(30)19(31)24-4-3-12(29)23-5-6-52)8-43-51(40,41)47-50(38,39)42-7-11-14(45-48(32,33)34)15(46-49(35,36)37)20(44-11)28-10-27-13-17(22)25-9-26-18(13)28/h9-11,14-16,20,30,52H,3-8H2,1-2H3,(H,23,29)(H,24,31)(H,38,39)(H,40,41)(H2,22,25,26)(H2,32,33,34)(H2,35,36,37)/t11-,14-,15-,16+,20-/m1/s1
;
AC8 InChIKey         InChI                1.03  SAXULFDJRFDTDN-IBOSZNHHSA-N 
AC8 SMILES_CANONICAL CACTVS               3.385 "CC(C)(CO[P](O)(=O)O[P](O)(=O)OC[C@H]1O[C@H]([C@H](O[P](O)(O)=O)[C@@H]1O[P](O)(O)=O)n2cnc3c(N)ncnc23)[C@@H](O)C(=O)NCCC(=O)NCCS" 
AC8 SMILES           CACTVS               3.385 "CC(C)(CO[P](O)(=O)O[P](O)(=O)OC[CH]1O[CH]([CH](O[P](O)(O)=O)[CH]1O[P](O)(O)=O)n2cnc3c(N)ncnc23)[CH](O)C(=O)NCCC(=O)NCCS" 
AC8 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CC(C)(CO[P@](=O)(O)O[P@](=O)(O)OC[C@@H]1[C@H]([C@H]([C@@H](O1)n2cnc3c2ncnc3N)OP(=O)(O)O)OP(=O)(O)O)[C@H](C(=O)NCCC(=O)NCCS)O" 
AC8 SMILES           "OpenEye OEToolkits" 1.7.6 "CC(C)(COP(=O)(O)OP(=O)(O)OCC1C(C(C(O1)n2cnc3c2ncnc3N)OP(=O)(O)O)OP(=O)(O)O)C(C(=O)NCCC(=O)NCCS)O" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
AC8 "SYSTEMATIC NAME" ACDLabs              12.01 
"[(2R,3R,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-bis(phosphonooxy)tetrahydrofuran-2-yl]methyl (3R)-3-hydroxy-2,2-dimethyl-4-oxo-4-({3-oxo-3-[(2-sulfanylethyl)amino]propyl}amino)butyl dihydrogen diphosphate (non-preferred name)"     
AC8 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 
"[[(2R,3R,4R,5R)-5-(6-aminopurin-9-yl)-3,4-diphosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(3R)-2,2-dimethyl-3-oxidanyl-4-oxidanylidene-4-[[3-oxidanylidene-3-(2-sulfanylethylamino)propyl]amino]butyl] hydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
AC8 "Create component" 2013-10-01 RCSB 
AC8 "Initial release"  2013-11-06 RCSB 
# 
