data_LB5
#

_chem_comp.id                                   LB5
_chem_comp.name                                 "~{N}-[(2~{S})-1-azanyl-4-cyclohexyl-1-oxidanylidene-butan-2-yl]-2-[[[1-(2-methylphenyl)pyrazol-4-yl]carbonylamino]methyl]-1,3-thiazole-5-carboxamide"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C26 H32 N6 O3 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-08-02
_chem_comp.pdbx_modified_date                   2019-09-06
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       508.636
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    LB5
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6SFI
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBE
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
LB5  N1   N1   N  0  1  Y  N  N  55.535  72.305  12.227    5.861  -0.849  -0.810  N1   LB5   1  
LB5  C2   C1   C  0  1  Y  N  N  53.884  76.335  11.491    9.679   0.615  -2.428  C2   LB5   2  
LB5  O2   O1   O  0  1  N  N  N  57.085  71.751  16.529    3.834   1.750   2.290  O2   LB5   3  
LB5  N3   N2   N  0  1  Y  N  N  58.168  67.620  18.075   -0.102  -1.306   2.846  N3   LB5   4  
LB5  C4   C2   C  0  1  Y  N  N  52.093  75.257  12.658   10.323   0.777  -0.125  C4   LB5   5  
LB5  N4   N3   N  0  1  N  N  N  54.805  66.090  20.368   -3.805  -1.182   0.007  N4   LB5   6  
LB5  C5   C3   C  0  1  Y  N  N  52.963  74.280  13.106    9.015   0.562   0.259  C5   LB5   7  
LB5  C6   C4   C  0  1  Y  N  N  54.307  74.336  12.721    8.031   0.372  -0.703  C6   LB5   8  
LB5  C10  C5   C  0  1  N  N  N  56.972  71.160  15.458    3.659   0.799   1.552  C10  LB5   9  
LB5  C8   C6   C  0  1  Y  N  N  56.338  71.816  14.297    4.752   0.332   0.680  C8   LB5  10  
LB5  C7   C7   C  0  1  Y  N  N  55.689  73.038  14.353    6.020   0.872   0.595  C7   LB5  11  
LB5  C9   C8   C  0  1  Y  N  N  56.201  71.418  12.949    4.698  -0.752  -0.225  C9   LB5  12  
LB5  N    N4   N  0  1  Y  N  N  55.192  73.281  13.125    6.702   0.154  -0.315  N    LB5  13  
LB5  C3   C9   C  0  1  Y  N  N  52.553  76.280  11.850   10.655   0.804  -1.468  C3   LB5  14  
LB5  C1   C10  C  0  1  Y  N  N  54.795  75.359  11.923    8.368   0.400  -2.049  C1   LB5  15  
LB5  C    C11  C  0  1  N  N  N  56.250  75.476  11.574    7.304   0.194  -3.097  C    LB5  16  
LB5  N2   N5   N  0  1  N  N  N  57.476  69.940  15.257    2.466   0.173   1.531  N2   LB5  17  
LB5  C11  C12  C  0  1  N  N  N  58.291  69.283  16.262    1.380   0.637   2.398  C11  LB5  18  
LB5  C12  C13  C  0  1  Y  N  N  57.558  68.382  17.204    0.163  -0.226   2.184  C12  LB5  19  
LB5  S    S1   S  0  1  Y  N  N  55.798  68.320  17.234   -1.062   0.082   1.033  S    LB5  20  
LB5  C14  C14  C  0  1  Y  N  N  55.922  67.206  18.553   -1.923  -1.367   1.547  C14  LB5  21  
LB5  C13  C15  C  0  1  Y  N  N  57.223  66.964  18.860   -1.203  -1.945   2.540  C13  LB5  22  
LB5  C15  C16  C  0  1  N  N  N  54.667  66.701  19.179   -3.192  -1.859   0.999  C15  LB5  23  
LB5  O1   O2   O  0  1  N  N  N  53.579  66.915  18.671   -3.691  -2.877   1.440  O1   LB5  24  
LB5  C16  C17  C  0  1  N  N  S  53.678  65.418  21.037   -5.073  -1.674  -0.539  C16  LB5  25  
LB5  C25  C18  C  0  1  N  N  N  53.815  65.584  22.559   -4.794  -2.700  -1.607  C25  LB5  26  
LB5  O    O3   O  0  1  N  N  N  54.316  64.679  23.241   -3.650  -2.993  -1.884  O    LB5  27  
LB5  N5   N6   N  0  1  N  N  N  53.479  66.775  23.074   -5.817  -3.294  -2.254  N5   LB5  28  
LB5  C17  C19  C  0  1  N  N  N  53.639  63.951  20.574   -5.853  -0.506  -1.146  C17  LB5  29  
LB5  C18  C20  C  0  1  N  N  N  52.442  63.121  20.985   -6.244   0.476  -0.039  C18  LB5  30  
LB5  C19  C21  C  0  1  N  N  N  51.053  63.522  20.410   -7.024   1.643  -0.646  C19  LB5  31  
LB5  C24  C22  C  0  1  N  N  N  49.995  62.511  20.838   -7.307   2.686   0.438  C24  LB5  32  
LB5  C23  C23  C  0  1  N  N  N  48.607  62.852  20.315   -8.087   3.853  -0.168  C23  LB5  33  
LB5  C22  C24  C  0  1  N  N  N  48.598  62.990  18.827   -9.411   3.340  -0.739  C22  LB5  34  
LB5  C21  C25  C  0  1  N  N  N  49.612  64.029  18.381   -9.128   2.298  -1.823  C21  LB5  35  
LB5  C20  C26  C  0  1  N  N  N  51.022  63.669  18.884   -8.348   1.130  -1.217  C20  LB5  36  
LB5  H1   H1   H  0  1  N  N  N  54.231  77.144  10.866    9.940   0.641  -3.476  H1   LB5  37  
LB5  H2   H2   H  0  1  N  N  N  51.051  75.221  12.940   11.088   0.925   0.623  H2   LB5  38  
LB5  H3   H3   H  0  1  N  N  N  55.701  66.092  20.812   -3.408  -0.370  -0.344  H3   LB5  39  
LB5  H4   H4   H  0  1  N  N  N  52.610  73.484  13.745    8.756   0.541   1.308  H4   LB5  40  
LB5  H5   H5   H  0  1  N  N  N  55.598  73.677  15.219    6.395   1.716   1.155  H5   LB5  41  
LB5  H6   H6   H  0  1  N  N  N  56.595  70.494  12.552    3.844  -1.389  -0.402  H6   LB5  42  
LB5  H7   H7   H  0  1  N  N  N  51.869  77.038  11.499   11.679   0.973  -1.766  H7   LB5  43  
LB5  H8   H8   H  0  1  N  N  N  56.767  76.065  12.346    7.155  -0.873  -3.259  H8   LB5  44  
LB5  H9   H9   H  0  1  N  N  N  56.696  74.472  11.520    6.371   0.645  -2.760  H9   LB5  45  
LB5  H10  H10  H  0  1  N  N  N  56.354  75.976  10.600    7.618   0.663  -4.030  H10  LB5  46  
LB5  H11  H11  H  0  1  N  N  N  57.288  69.469  14.395    2.327  -0.585   0.942  H11  LB5  47  
LB5  H12  H12  H  0  1  N  N  N  59.050  68.681  15.741    1.693   0.572   3.440  H12  LB5  48  
LB5  H13  H13  H  0  1  N  N  N  58.787  70.063  16.858    1.138   1.672   2.155  H13  LB5  49  
LB5  H14  H14  H  0  1  N  N  N  57.508  66.302  19.665   -1.510  -2.855   3.034  H14  LB5  50  
LB5  H15  H15  H  0  1  N  N  N  52.740  65.899  20.724   -5.660  -2.129   0.258  H15  LB5  51  
LB5  H16  H16  H  0  1  N  N  N  53.630  66.961  24.045   -6.732  -3.060  -2.033  H16  LB5  52  
LB5  H17  H17  H  0  1  N  N  N  53.077  67.478  22.487   -5.638  -3.954  -2.941  H17  LB5  53  
LB5  H18  H18  H  0  1  N  N  N  54.536  63.455  20.973   -5.231   0.004  -1.881  H18  LB5  54  
LB5  H19  H19  H  0  1  N  N  N  53.678  63.951  19.475   -6.753  -0.884  -1.631  H19  LB5  55  
LB5  H20  H20  H  0  1  N  N  N  52.370  63.169  22.082   -6.866  -0.034   0.696  H20  LB5  56  
LB5  H21  H21  H  0  1  N  N  N  52.639  62.084  20.675   -5.343   0.853   0.446  H21  LB5  57  
LB5  H22  H22  H  0  1  N  N  N  50.784  64.496  20.846   -6.437   2.099  -1.443  H22  LB5  58  
LB5  H23  H23  H  0  1  N  N  N  49.959  62.484  21.937   -7.894   2.231   1.235  H23  LB5  59  
LB5  H24  H24  H  0  1  N  N  N  50.281  61.520  20.456   -6.364   3.051   0.845  H24  LB5  60  
LB5  H25  H25  H  0  1  N  N  N  48.280  63.802  20.764   -8.289   4.596   0.604  H25  LB5  61  
LB5  H26  H26  H  0  1  N  N  N  47.910  62.051  20.603   -7.500   4.308  -0.965  H26  LB5  62  
LB5  H27  H27  H  0  1  N  N  N  47.595  63.299  18.499   -9.999   2.885   0.058  H27  LB5  63  
LB5  H28  H28  H  0  1  N  N  N  48.850  62.021  18.372   -9.967   4.172  -1.171  H28  LB5  64  
LB5  H29  H29  H  0  1  N  N  N  49.622  64.074  17.282  -10.071   1.932  -2.230  H29  LB5  65  
LB5  H30  H30  H  0  1  N  N  N  49.324  65.010  18.786   -8.541   2.753  -2.621  H30  LB5  66  
LB5  H31  H31  H  0  1  N  N  N  51.333  62.718  18.427   -8.147   0.388  -1.989  H31  LB5  67  
LB5  H32  H32  H  0  1  N  N  N  51.721  64.464  18.587   -8.936   0.675  -0.419  H32  LB5  68  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
LB5  C2   C3   DOUB  Y  N   1  
LB5  C2   C1   SING  Y  N   2  
LB5  C    C1   SING  N  N   3  
LB5  C3   C4   SING  Y  N   4  
LB5  C1   C6   DOUB  Y  N   5  
LB5  N1   C9   DOUB  Y  N   6  
LB5  N1   N    SING  Y  N   7  
LB5  C4   C5   DOUB  Y  N   8  
LB5  C6   C5   SING  Y  N   9  
LB5  C6   N    SING  N  N  10  
LB5  C9   C8   SING  Y  N  11  
LB5  N    C7   SING  Y  N  12  
LB5  C8   C7   DOUB  Y  N  13  
LB5  C8   C10  SING  N  N  14  
LB5  N2   C10  SING  N  N  15  
LB5  N2   C11  SING  N  N  16  
LB5  C10  O2   DOUB  N  N  17  
LB5  C11  C12  SING  N  N  18  
LB5  C12  S    SING  Y  N  19  
LB5  C12  N3   DOUB  Y  N  20  
LB5  S    C14  SING  Y  N  21  
LB5  N3   C13  SING  Y  N  22  
LB5  C21  C22  SING  N  N  23  
LB5  C21  C20  SING  N  N  24  
LB5  C14  C13  DOUB  Y  N  25  
LB5  C14  C15  SING  N  N  26  
LB5  O1   C15  DOUB  N  N  27  
LB5  C22  C23  SING  N  N  28  
LB5  C20  C19  SING  N  N  29  
LB5  C15  N4   SING  N  N  30  
LB5  C23  C24  SING  N  N  31  
LB5  N4   C16  SING  N  N  32  
LB5  C19  C24  SING  N  N  33  
LB5  C19  C18  SING  N  N  34  
LB5  C17  C18  SING  N  N  35  
LB5  C17  C16  SING  N  N  36  
LB5  C16  C25  SING  N  N  37  
LB5  C25  N5   SING  N  N  38  
LB5  C25  O    DOUB  N  N  39  
LB5  C2   H1   SING  N  N  40  
LB5  C4   H2   SING  N  N  41  
LB5  N4   H3   SING  N  N  42  
LB5  C5   H4   SING  N  N  43  
LB5  C7   H5   SING  N  N  44  
LB5  C9   H6   SING  N  N  45  
LB5  C3   H7   SING  N  N  46  
LB5  C    H8   SING  N  N  47  
LB5  C    H9   SING  N  N  48  
LB5  C    H10  SING  N  N  49  
LB5  N2   H11  SING  N  N  50  
LB5  C11  H12  SING  N  N  51  
LB5  C11  H13  SING  N  N  52  
LB5  C13  H14  SING  N  N  53  
LB5  C16  H15  SING  N  N  54  
LB5  N5   H16  SING  N  N  55  
LB5  N5   H17  SING  N  N  56  
LB5  C17  H18  SING  N  N  57  
LB5  C17  H19  SING  N  N  58  
LB5  C18  H20  SING  N  N  59  
LB5  C18  H21  SING  N  N  60  
LB5  C19  H22  SING  N  N  61  
LB5  C24  H23  SING  N  N  62  
LB5  C24  H24  SING  N  N  63  
LB5  C23  H25  SING  N  N  64  
LB5  C23  H26  SING  N  N  65  
LB5  C22  H27  SING  N  N  66  
LB5  C22  H28  SING  N  N  67  
LB5  C21  H29  SING  N  N  68  
LB5  C21  H30  SING  N  N  69  
LB5  C20  H31  SING  N  N  70  
LB5  C20  H32  SING  N  N  71  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
LB5  InChI             InChI                 1.03   "InChI=1S/C26H32N6O3S/c1-17-7-5-6-10-21(17)32-16-19(13-30-32)25(34)29-15-23-28-14-22(36-23)26(35)31-20(24(27)33)12-11-18-8-3-2-4-9-18/h5-7,10,13-14,16,18,20H,2-4,8-9,11-12,15H2,1H3,(H2,27,33)(H,29,34)(H,31,35)/t20-/m0/s1"  
LB5  InChIKey          InChI                 1.03   MYJMLFRMWQAWML-FQEVSTJZSA-N  
LB5  SMILES_CANONICAL  CACTVS                3.385  "Cc1ccccc1n2cc(cn2)C(=O)NCc3sc(cn3)C(=O)N[C@@H](CCC4CCCCC4)C(N)=O"  
LB5  SMILES            CACTVS                3.385  "Cc1ccccc1n2cc(cn2)C(=O)NCc3sc(cn3)C(=O)N[CH](CCC4CCCCC4)C(N)=O"  
LB5  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "Cc1ccccc1n2cc(cn2)C(=O)NCc3ncc(s3)C(=O)N[C@@H](CCC4CCCCC4)C(=O)N"  
LB5  SMILES            "OpenEye OEToolkits"  2.0.7  "Cc1ccccc1n2cc(cn2)C(=O)NCc3ncc(s3)C(=O)NC(CCC4CCCCC4)C(=O)N"  
#
_pdbx_chem_comp_identifier.comp_id          LB5
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "~{N}-[(2~{S})-1-azanyl-4-cyclohexyl-1-oxidanylidene-butan-2-yl]-2-[[[1-(2-methylphenyl)pyrazol-4-yl]carbonylamino]methyl]-1,3-thiazole-5-carboxamide"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
LB5  "Create component"  2019-08-02  PDBE  
LB5  "Initial release"   2019-09-11  RCSB  
##
