data_OP4
#

_chem_comp.id                                   OP4
_chem_comp.name                                 "5-fluoro-2-({4-[7-({trans-4-[(methylsulfonyl)amino]cyclohexyl}methyl)-2,7-diazaspiro[3.5]nonan-2-yl]pyrimidin-5-yl}oxy)-N,N-di(propan-2-yl)benzamide"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C32 H47 F N6 O4 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-07-02
_chem_comp.pdbx_modified_date                   2019-12-13
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       630.817
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    OP4
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6PKC
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
OP4  F    F1   F  0  1  N  N  N  -14.680  -18.834  -20.235    5.479   3.051   3.319  F    OP4   1  
OP4  C30  C1   C  0  1  Y  N  N  -14.994  -17.814  -21.017    5.270   2.148   2.336  C30  OP4   2  
OP4  C31  C2   C  0  1  Y  N  N  -14.068  -17.444  -22.037    4.741   2.557   1.129  C31  OP4   3  
OP4  C7   C3   C  0  1  Y  N  N  -14.433  -16.374  -22.854    4.530   1.625   0.109  C7   OP4   4  
OP4  C6   C4   C  0  1  N  N  N  -13.550  -15.780  -23.904    3.965   2.055  -1.184  C6   OP4   5  
OP4  O    O1   O  0  1  N  N  N  -12.847  -14.813  -23.495    4.433   1.631  -2.223  O    OP4   6  
OP4  N    N1   N  0  1  N  N  N  -13.460  -16.259  -25.100    2.930   2.918  -1.213  N    OP4   7  
OP4  C3   C5   C  0  1  N  N  N  -14.138  -17.494  -25.497    2.807   3.950  -0.181  C3   OP4   8  
OP4  C5   C6   C  0  1  N  N  N  -13.156  -18.705  -25.661    2.734   3.287   1.196  C5   OP4   9  
OP4  C4   C7   C  0  1  N  N  N  -15.011  -17.189  -26.708    4.023   4.876  -0.237  C4   OP4  10  
OP4  C1   C8   C  0  1  N  N  N  -12.504  -15.675  -26.067    1.928   2.824  -2.278  C1   OP4  11  
OP4  C2   C9   C  0  1  N  N  N  -11.104  -15.681  -25.524    0.552   2.567  -1.662  C2   OP4  12  
OP4  C    C10  C  0  1  N  N  N  -12.963  -14.261  -26.557    1.898   4.135  -3.067  C    OP4  13  
OP4  C29  C11  C  0  1  Y  N  N  -16.262  -17.190  -20.852    5.594   0.815   2.541  C29  OP4  14  
OP4  C28  C12  C  0  1  Y  N  N  -16.560  -16.079  -21.616    5.386  -0.115   1.543  C28  OP4  15  
OP4  C8   C13  C  0  1  Y  N  N  -15.720  -15.686  -22.611    4.859   0.280   0.322  C8   OP4  16  
OP4  O1   O2   O  0  1  N  N  N  -16.017  -14.628  -23.375    4.659  -0.634  -0.661  O1   OP4  17  
OP4  C9   C14  C  0  1  Y  N  N  -16.709  -14.755  -24.567    4.888  -1.943  -0.372  C9   OP4  18  
OP4  C12  C15  C  0  1  Y  N  N  -16.601  -13.748  -25.570    3.883  -2.742   0.188  C12  OP4  19  
OP4  N2   N2   N  0  1  Y  N  N  -17.296  -13.936  -26.711    4.150  -4.016   0.454  N2   OP4  20  
OP4  C11  C16  C  0  1  Y  N  N  -18.082  -14.963  -26.874    5.339  -4.524   0.196  C11  OP4  21  
OP4  N1   N3   N  0  1  Y  N  N  -18.232  -15.882  -25.992    6.306  -3.801  -0.330  N1   OP4  22  
OP4  C10  C17  C  0  1  Y  N  N  -17.544  -15.814  -24.806    6.119  -2.523  -0.630  C10  OP4  23  
OP4  N3   N4   N  0  1  N  N  N  -15.852  -12.611  -25.424    2.630  -2.211   0.461  N3   OP4  24  
OP4  C15  C18  C  0  1  N  N  N  -15.808  -11.446  -26.264    1.775  -2.228  -0.741  C15  OP4  25  
OP4  C14  C19  C  0  1  N  N  N  -15.025  -10.760  -25.119    0.623  -2.682   0.157  C14  OP4  26  
OP4  C13  C20  C  0  1  N  N  N  -15.062  -12.041  -24.288    1.739  -3.233   1.046  C13  OP4  27  
OP4  C27  C21  C  0  1  N  N  N  -13.606  -10.382  -25.526   -0.167  -1.537   0.784  C27  OP4  28  
OP4  C26  C22  C  0  1  N  N  N  -13.553   -9.194  -26.479   -1.142  -0.975  -0.256  C26  OP4  29  
OP4  N4   N5   N  0  1  N  N  N  -14.303   -7.974  -25.931   -2.010  -2.054  -0.744  N4   OP4  30  
OP4  C17  C23  C  0  1  N  N  N  -15.694   -8.329  -25.555   -1.238  -3.088  -1.446  C17  OP4  31  
OP4  C16  C24  C  0  1  N  N  N  -15.754   -9.517  -24.571   -0.268  -3.754  -0.464  C16  OP4  32  
OP4  C18  C25  C  0  1  N  N  N  -14.216   -6.957  -27.011   -3.079  -1.523  -1.601  C18  OP4  33  
OP4  C19  C26  C  0  1  N  N  N  -14.873   -5.615  -26.500   -4.026  -0.664  -0.761  C19  OP4  34  
OP4  C24  C27  C  0  1  N  N  N  -14.778   -4.559  -27.546   -4.677  -1.530   0.319  C24  OP4  35  
OP4  C23  C28  C  0  1  N  N  N  -15.276   -3.155  -27.140   -5.624  -0.671   1.159  C23  OP4  36  
OP4  C22  C29  C  0  1  N  N  N  -14.784   -2.682  -25.759   -6.709  -0.078   0.258  C22  OP4  37  
OP4  C21  C30  C  0  1  N  N  N  -15.034   -3.812  -24.731   -6.059   0.787  -0.822  C21  OP4  38  
OP4  C20  C31  C  0  1  N  N  N  -14.336   -5.135  -25.156   -5.111  -0.072  -1.662  C20  OP4  39  
OP4  N5   N6   N  0  1  N  N  N  -15.563   -1.467  -25.475   -7.617   0.744   1.062  N5   OP4  40  
OP4  S    S1   S  0  1  N  N  N  -14.748   -0.298  -24.755   -9.230   0.800   0.693  S    OP4  41  
OP4  O2   O3   O  0  1  N  N  N  -15.642    0.800  -24.500   -9.777   1.698   1.650  O2   OP4  42  
OP4  O3   O4   O  0  1  N  N  N  -13.803    0.206  -25.730   -9.262   1.100  -0.695  O3   OP4  43  
OP4  C25  C32  C  0  1  N  N  N  -13.876   -0.809  -23.455   -9.822  -0.888   0.994  C25  OP4  44  
OP4  H1   H1   H  0  1  N  N  N  -13.132  -17.966  -22.170    4.489   3.596   0.972  H1   OP4  45  
OP4  H2   H2   H  0  1  N  N  N  -14.822  -17.766  -24.680    1.900   4.529  -0.353  H2   OP4  46  
OP4  H3   H3   H  0  1  N  N  N  -12.578  -18.837  -24.735    3.020   2.238   1.111  H3   OP4  47  
OP4  H4   H4   H  0  1  N  N  N  -13.732  -19.619  -25.866    3.415   3.794   1.880  H4   OP4  48  
OP4  H5   H5   H  0  1  N  N  N  -12.469  -18.509  -26.497    1.716   3.355   1.580  H5   OP4  49  
OP4  H6   H6   H  0  1  N  N  N  -15.658  -16.327  -26.487    3.735   5.826  -0.688  H6   OP4  50  
OP4  H7   H7   H  0  1  N  N  N  -14.371  -16.955  -27.572    4.394   5.051   0.772  H7   OP4  51  
OP4  H8   H8   H  0  1  N  N  N  -15.634  -18.065  -26.940    4.806   4.412  -0.837  H8   OP4  52  
OP4  H9   H9   H  0  1  N  N  N  -12.505  -16.323  -26.956    2.185   2.003  -2.947  H9   OP4  53  
OP4  H10  H10  H  0  1  N  N  N  -10.841  -16.698  -25.198    0.294   3.388  -0.993  H10  OP4  54  
OP4  H11  H11  H  0  1  N  N  N  -10.405  -15.356  -26.309   -0.194   2.497  -2.454  H11  OP4  55  
OP4  H12  H12  H  0  1  N  N  N  -11.040  -14.993  -24.668    0.573   1.634  -1.100  H12  OP4  56  
OP4  H13  H13  H  0  1  N  N  N  -13.992  -14.322  -26.942    1.641   4.956  -2.398  H13  OP4  57  
OP4  H14  H14  H  0  1  N  N  N  -12.927  -13.552  -25.716    2.879   4.317  -3.506  H14  OP4  58  
OP4  H15  H15  H  0  1  N  N  N  -12.292  -13.915  -27.357    1.153   4.065  -3.859  H15  OP4  59  
OP4  H16  H16  H  0  1  N  N  N  -16.978  -17.578  -20.143    6.012   0.504   3.487  H16  OP4  60  
OP4  H17  H17  H  0  1  N  N  N  -17.464  -15.520  -21.423    5.641  -1.151   1.710  H17  OP4  61  
OP4  H18  H18  H  0  1  N  N  N  -18.635  -15.044  -27.798    5.525  -5.563   0.424  H18  OP4  62  
OP4  H19  H19  H  0  1  N  N  N  -17.661  -16.591  -24.065    6.919  -1.940  -1.061  H19  OP4  63  
OP4  H20  H20  H  0  1  N  N  N  -15.243  -11.572  -27.199    1.622  -1.242  -1.180  H20  OP4  64  
OP4  H21  H21  H  0  1  N  N  N  -16.788  -10.999  -26.486    2.073  -2.976  -1.476  H21  OP4  65  
OP4  H22  H22  H  0  1  N  N  N  -15.605  -11.963  -23.334    2.028  -4.254   0.798  H22  OP4  66  
OP4  H23  H23  H  0  1  N  N  N  -14.084  -12.514  -24.116    1.556  -3.092   2.111  H23  OP4  67  
OP4  H24  H24  H  0  1  N  N  N  -13.141  -11.248  -26.020   -0.725  -1.907   1.645  H24  OP4  68  
OP4  H25  H25  H  0  1  N  N  N  -13.038  -10.129  -24.619    0.519  -0.753   1.104  H25  OP4  69  
OP4  H26  H26  H  0  1  N  N  N  -14.008   -9.488  -27.436   -1.753  -0.197   0.202  H26  OP4  70  
OP4  H27  H27  H  0  1  N  N  N  -12.501   -8.918  -26.642   -0.581  -0.554  -1.090  H27  OP4  71  
OP4  H29  H29  H  0  1  N  N  N  -16.166   -7.455  -25.082   -1.919  -3.839  -1.849  H29  OP4  72  
OP4  H30  H30  H  0  1  N  N  N  -16.249   -8.597  -26.466   -0.676  -2.632  -2.260  H30  OP4  73  
OP4  H31  H31  H  0  1  N  N  N  -15.282   -9.217  -23.624    0.349  -4.478  -0.995  H31  OP4  74  
OP4  H32  H32  H  0  1  N  N  N  -16.808   -9.775  -24.390   -0.832  -4.259   0.321  H32  OP4  75  
OP4  H33  H33  H  0  1  N  N  N  -14.753   -7.316  -27.901   -2.641  -0.915  -2.392  H33  OP4  76  
OP4  H34  H34  H  0  1  N  N  N  -13.161   -6.778  -27.267   -3.634  -2.350  -2.044  H34  OP4  77  
OP4  H35  H35  H  0  1  N  N  N  -15.941   -5.833  -26.355   -3.464   0.143  -0.291  H35  OP4  78  
OP4  H36  H36  H  0  1  N  N  N  -15.371   -4.889  -28.412   -5.239  -2.337  -0.151  H36  OP4  79  
OP4  H37  H37  H  0  1  N  N  N  -13.721   -4.469  -27.838   -3.904  -1.952   0.961  H37  OP4  80  
OP4  H38  H38  H  0  1  N  N  N  -14.928   -2.435  -27.895   -6.088  -1.288   1.929  H38  OP4  81  
OP4  H39  H39  H  0  1  N  N  N  -16.376   -3.170  -27.127   -5.062   0.136   1.630  H39  OP4  82  
OP4  H40  H40  H  0  1  N  N  N  -13.709   -2.454  -25.805   -7.272  -0.885  -0.212  H40  OP4  83  
OP4  H41  H41  H  0  1  N  N  N  -14.640   -3.499  -23.753   -6.832   1.209  -1.464  H41  OP4  84  
OP4  H42  H42  H  0  1  N  N  N  -16.117   -3.989  -24.651   -5.497   1.594  -0.352  H42  OP4  85  
OP4  H43  H43  H  0  1  N  N  N  -14.526   -5.905  -24.394   -4.648   0.545  -2.432  H43  OP4  86  
OP4  H44  H44  H  0  1  N  N  N  -13.253   -4.962  -25.240   -5.673  -0.879  -2.133  H44  OP4  87  
OP4  H45  H45  H  0  1  N  N  N  -15.913   -1.113  -26.342   -7.272   1.256   1.811  H45  OP4  88  
OP4  H46  H46  H  0  1  N  N  N  -14.558   -1.202  -22.687   -9.652  -1.152   2.037  H46  OP4  89  
OP4  H47  H47  H  0  1  N  N  N  -13.182   -1.602  -23.768  -10.888  -0.943   0.773  H47  OP4  90  
OP4  H48  H48  H  0  1  N  N  N  -13.305    0.036  -23.042   -9.281  -1.582   0.350  H48  OP4  91  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
OP4  C24  C23  SING  N  N   1  
OP4  C24  C19  SING  N  N   2  
OP4  C23  C22  SING  N  N   3  
OP4  C18  C19  SING  N  N   4  
OP4  C18  N4   SING  N  N   5  
OP4  C11  N2   DOUB  Y  N   6  
OP4  C11  N1   SING  Y  N   7  
OP4  N2   C12  SING  Y  N   8  
OP4  C4   C3   SING  N  N   9  
OP4  C    C1   SING  N  N  10  
OP4  C19  C20  SING  N  N  11  
OP4  C26  N4   SING  N  N  12  
OP4  C26  C27  SING  N  N  13  
OP4  C15  N3   SING  N  N  14  
OP4  C15  C14  SING  N  N  15  
OP4  C1   C2   SING  N  N  16  
OP4  C1   N    SING  N  N  17  
OP4  N1   C10  DOUB  Y  N  18  
OP4  N4   C17  SING  N  N  19  
OP4  C22  N5   SING  N  N  20  
OP4  C22  C21  SING  N  N  21  
OP4  O3   S    DOUB  N  N  22  
OP4  C5   C3   SING  N  N  23  
OP4  C12  N3   SING  N  N  24  
OP4  C12  C9   DOUB  Y  N  25  
OP4  C17  C16  SING  N  N  26  
OP4  C27  C14  SING  N  N  27  
OP4  C3   N    SING  N  N  28  
OP4  N5   S    SING  N  N  29  
OP4  N3   C13  SING  N  N  30  
OP4  C20  C21  SING  N  N  31  
OP4  C14  C16  SING  N  N  32  
OP4  C14  C13  SING  N  N  33  
OP4  N    C6   SING  N  N  34  
OP4  C10  C9   SING  Y  N  35  
OP4  S    O2   DOUB  N  N  36  
OP4  S    C25  SING  N  N  37  
OP4  C9   O1   SING  N  N  38  
OP4  C6   O    DOUB  N  N  39  
OP4  C6   C7   SING  N  N  40  
OP4  O1   C8   SING  N  N  41  
OP4  C7   C8   DOUB  Y  N  42  
OP4  C7   C31  SING  Y  N  43  
OP4  C8   C28  SING  Y  N  44  
OP4  C31  C30  DOUB  Y  N  45  
OP4  C28  C29  DOUB  Y  N  46  
OP4  C30  C29  SING  Y  N  47  
OP4  C30  F    SING  N  N  48  
OP4  C31  H1   SING  N  N  49  
OP4  C3   H2   SING  N  N  50  
OP4  C5   H3   SING  N  N  51  
OP4  C5   H4   SING  N  N  52  
OP4  C5   H5   SING  N  N  53  
OP4  C4   H6   SING  N  N  54  
OP4  C4   H7   SING  N  N  55  
OP4  C4   H8   SING  N  N  56  
OP4  C1   H9   SING  N  N  57  
OP4  C2   H10  SING  N  N  58  
OP4  C2   H11  SING  N  N  59  
OP4  C2   H12  SING  N  N  60  
OP4  C    H13  SING  N  N  61  
OP4  C    H14  SING  N  N  62  
OP4  C    H15  SING  N  N  63  
OP4  C29  H16  SING  N  N  64  
OP4  C28  H17  SING  N  N  65  
OP4  C11  H18  SING  N  N  66  
OP4  C10  H19  SING  N  N  67  
OP4  C15  H20  SING  N  N  68  
OP4  C15  H21  SING  N  N  69  
OP4  C13  H22  SING  N  N  70  
OP4  C13  H23  SING  N  N  71  
OP4  C27  H24  SING  N  N  72  
OP4  C27  H25  SING  N  N  73  
OP4  C26  H26  SING  N  N  74  
OP4  C26  H27  SING  N  N  75  
OP4  C17  H29  SING  N  N  76  
OP4  C17  H30  SING  N  N  77  
OP4  C16  H31  SING  N  N  78  
OP4  C16  H32  SING  N  N  79  
OP4  C18  H33  SING  N  N  80  
OP4  C18  H34  SING  N  N  81  
OP4  C19  H35  SING  N  N  82  
OP4  C24  H36  SING  N  N  83  
OP4  C24  H37  SING  N  N  84  
OP4  C23  H38  SING  N  N  85  
OP4  C23  H39  SING  N  N  86  
OP4  C22  H40  SING  N  N  87  
OP4  C21  H41  SING  N  N  88  
OP4  C21  H42  SING  N  N  89  
OP4  C20  H43  SING  N  N  90  
OP4  C20  H44  SING  N  N  91  
OP4  N5   H45  SING  N  N  92  
OP4  C25  H46  SING  N  N  93  
OP4  C25  H47  SING  N  N  94  
OP4  C25  H48  SING  N  N  95  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
OP4  SMILES            ACDLabs               12.01  "Fc1ccc(c(c1)C(=O)N(C(C)C)C(C)C)Oc5c(N2CC3(C2)CCN(CC3)CC4CCC(CC4)NS(=O)(C)=O)ncnc5"  
OP4  InChI             InChI                 1.03   "InChI=1S/C32H47FN6O4S/c1-22(2)39(23(3)4)31(40)27-16-25(33)8-11-28(27)43-29-17-34-21-35-30(29)38-19-32(20-38)12-14-37(15-13-32)18-24-6-9-26(10-7-24)36-44(5,41)42/h8,11,16-17,21-24,26,36H,6-7,9-10,12-15,18-20H2,1-5H3/t24-,26-"  
OP4  InChIKey          InChI                 1.03   ADHHOUXZPBYYSU-YOCNBXQISA-N  
OP4  SMILES_CANONICAL  CACTVS                3.385  "CC(C)N(C(C)C)C(=O)c1cc(F)ccc1Oc2cncnc2N3CC4(CCN(CC4)C[C@@H]5CC[C@H](CC5)N[S](C)(=O)=O)C3"  
OP4  SMILES            CACTVS                3.385  "CC(C)N(C(C)C)C(=O)c1cc(F)ccc1Oc2cncnc2N3CC4(CCN(CC4)C[CH]5CC[CH](CC5)N[S](C)(=O)=O)C3"  
OP4  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CC(C)N(C(C)C)C(=O)c1cc(ccc1Oc2cncnc2N3CC4(C3)CCN(CC4)CC5CCC(CC5)NS(=O)(=O)C)F"  
OP4  SMILES            "OpenEye OEToolkits"  2.0.7  "CC(C)N(C(C)C)C(=O)c1cc(ccc1Oc2cncnc2N3CC4(C3)CCN(CC4)CC5CCC(CC5)NS(=O)(=O)C)F"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
OP4  "SYSTEMATIC NAME"  ACDLabs               12.01  "5-fluoro-2-({4-[7-({trans-4-[(methylsulfonyl)amino]cyclohexyl}methyl)-2,7-diazaspiro[3.5]nonan-2-yl]pyrimidin-5-yl}oxy)-N,N-di(propan-2-yl)benzamide"  
OP4  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "5-fluoranyl-2-[4-[7-[[4-(methylsulfonylamino)cyclohexyl]methyl]-2,7-diazaspiro[3.5]nonan-2-yl]pyrimidin-5-yl]oxy-~{N},~{N}-di(propan-2-yl)benzamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
OP4  "Create component"  2019-07-02  RCSB  
OP4  "Initial release"   2019-12-18  RCSB  
##
