data_YY3
# 
_chem_comp.id                                    YY3 
_chem_comp.name                                  "N-(2-{[2-(dimethylamino)ethyl](methyl)amino}-4-methoxy-5-{[4-(1-methyl-1H-indol-3-yl)pyrimidin-2-yl]amino}phenyl)prop-2-enamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C28 H33 N7 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "Osimertinib; AZD 9291" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-04-14 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        499.607 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YY3 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4ZAU 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YY3 C13 C1  C 0 1 N N N N N N -3.219 -49.797 11.090 -7.402 -0.752 2.495  C13 YY3 1  
YY3 N2  N1  N 0 1 N N N N N N -2.436 -49.043 12.078 -7.838 -1.157 1.153  N2  YY3 2  
YY3 C12 C2  C 0 1 N N N N N N -3.194 -48.214 13.048 -9.280 -0.937 0.979  C12 YY3 3  
YY3 C11 C3  C 0 1 N N N N N N -1.879 -50.142 12.917 -7.070 -0.456 0.115  C11 YY3 4  
YY3 C10 C4  C 0 1 N N N N N N -0.345 -50.272 12.750 -5.608 -0.903 0.173  C10 YY3 5  
YY3 N1  N2  N 0 1 N N N N N N 0.254  -49.422 13.827 -4.840 -0.202 -0.865 N1  YY3 6  
YY3 C28 C5  C 0 1 N N N N N N 1.286  -48.486 13.305 -5.277 -0.608 -2.207 C28 YY3 7  
YY3 C3  C6  C 0 1 Y N N N N N 1.827  -50.988 14.792 -2.949 -1.699 -0.745 C3  YY3 8  
YY3 C4  C7  C 0 1 Y N N N N N 2.257  -51.756 15.883 -1.588 -1.906 -0.582 C4  YY3 9  
YY3 O1  O1  O 0 1 N N N N N N 3.384  -52.563 15.797 -1.083 -3.168 -0.628 O1  YY3 10 
YY3 C14 C8  C 0 1 N N N N N N 4.256  -52.214 14.743 -2.012 -4.232 -0.847 C14 YY3 11 
YY3 C2  C9  C 0 1 Y N N N N N 0.689  -50.202 14.923 -3.465 -0.412 -0.699 C2  YY3 12 
YY3 C1  C10 C 0 1 Y N N N N N -0.087 -50.180 16.114 -2.614 0.673  -0.489 C1  YY3 13 
YY3 N   N3  N 0 1 N N N N N N -1.189 -49.383 16.261 -3.135 1.974  -0.442 N   YY3 14 
YY3 C7  C11 C 0 1 N N N N N N -2.231 -49.678 17.060 -2.592 2.887  0.387  C7  YY3 15 
YY3 O   O2  O 0 1 N N N N N N -2.274 -50.745 17.661 -1.598 2.610  1.031  O   YY3 16 
YY3 C8  C12 C 0 1 N N N N N N -3.397 -48.677 17.218 -3.201 4.220  0.512  C8  YY3 17 
YY3 C9  C13 C 0 1 N N N N N N -4.596 -48.925 18.068 -2.665 5.122  1.330  C9  YY3 18 
YY3 C6  C14 C 0 1 Y N N N N N 0.377  -50.964 17.204 -1.253 0.464  -0.326 C6  YY3 19 
YY3 C5  C15 C 0 1 Y N N N N N 1.539  -51.745 17.102 -0.738 -0.823 -0.372 C5  YY3 20 
YY3 N3  N4  N 0 1 N N N N N N 2.039  -52.582 18.130 0.639  -1.035 -0.207 N3  YY3 21 
YY3 C15 C16 C 0 1 Y N N N N N 1.698  -52.593 19.485 1.536  -0.024 -0.508 C15 YY3 22 
YY3 N5  N5  N 0 1 Y N N N N N 0.969  -51.651 20.069 2.819  -0.198 -0.235 N5  YY3 23 
YY3 N4  N6  N 0 1 Y N N N N N 2.165  -53.615 20.209 1.087  1.091  -1.069 N4  YY3 24 
YY3 C16 C17 C 0 1 Y N N N N N 1.887  -53.718 21.568 1.913  2.081  -1.373 C16 YY3 25 
YY3 C17 C18 C 0 1 Y N N N N N 1.137  -52.743 22.189 3.261  1.946  -1.101 C17 YY3 26 
YY3 C18 C19 C 0 1 Y N N N N N 0.675  -51.686 21.396 3.707  0.756  -0.514 C18 YY3 27 
YY3 C19 C20 C 0 1 Y N N N N N -0.146 -50.602 22.012 5.140  0.561  -0.208 C19 YY3 28 
YY3 C26 C21 C 0 1 Y N N N N N -0.411 -49.394 21.476 5.756  -0.631 0.399  C26 YY3 29 
YY3 C25 C22 C 0 1 Y N N N N N -0.056 -48.818 20.307 5.261  -1.854 0.848  C25 YY3 30 
YY3 C24 C23 C 0 1 Y N N N N N -0.467 -47.530 19.965 6.117  -2.779 1.378  C24 YY3 31 
YY3 C23 C24 C 0 1 Y N N N N N -1.266 -46.834 20.866 7.475  -2.509 1.473  C23 YY3 32 
YY3 C22 C25 C 0 1 Y N N N N N -1.616 -47.437 22.071 7.983  -1.306 1.036  C22 YY3 33 
YY3 C21 C26 C 0 1 Y N N N N N -1.172 -48.726 22.353 7.130  -0.351 0.492  C21 YY3 34 
YY3 N6  N7  N 0 1 Y N N N N N -1.374 -49.508 23.404 7.329  0.913  -0.020 N6  YY3 35 
YY3 C27 C27 C 0 1 N N N N N N -2.158 -49.137 24.586 8.627  1.587  -0.109 C27 YY3 36 
YY3 C20 C28 C 0 1 Y N N N N N -0.751 -50.661 23.205 6.147  1.444  -0.438 C20 YY3 37 
YY3 H1  H1  H 0 1 N N N N N N -3.698 -49.097 10.389 -7.549 0.321  2.617  H1  YY3 38 
YY3 H2  H2  H 0 1 N N N N N N -2.554 -50.474 10.534 -7.986 -1.286 3.244  H2  YY3 39 
YY3 H3  H3  H 0 1 N N N N N N -3.992 -50.385 11.606 -6.345 -0.990 2.621  H3  YY3 40 
YY3 H5  H5  H 0 1 N N N N N N -2.491 -47.707 13.725 -9.496 0.129  1.046  H5  YY3 41 
YY3 H6  H6  H 0 1 N N N N N N -3.786 -47.463 12.504 -9.590 -1.311 0.003  H6  YY3 42 
YY3 H7  H7  H 0 1 N N N N N N -3.867 -48.858 13.633 -9.825 -1.467 1.760  H7  YY3 43 
YY3 H8  H8  H 0 1 N N N N N N -2.106 -49.934 13.973 -7.484 -0.692 -0.865 H8  YY3 44 
YY3 H9  H9  H 0 1 N N N N N N -2.351 -51.090 12.621 -7.128 0.619  0.284  H9  YY3 45 
YY3 H10 H10 H 0 1 N N N N N N -0.034 -51.320 12.871 -5.194 -0.667 1.153  H10 YY3 46 
YY3 H11 H11 H 0 1 N N N N N N -0.035 -49.910 11.759 -5.550 -1.979 0.004  H11 YY3 47 
YY3 H12 H12 H 0 1 N N N N N N 1.692  -47.888 14.134 -6.333 -0.369 -2.333 H12 YY3 48 
YY3 H13 H13 H 0 1 N N N N N N 2.098  -49.061 12.835 -4.692 -0.074 -2.956 H13 YY3 49 
YY3 H14 H14 H 0 1 N N N N N N 0.831  -47.818 12.559 -5.130 -1.681 -2.329 H14 YY3 50 
YY3 H15 H15 H 0 1 N N N N N N 2.374  -51.007 13.861 -3.607 -2.538 -0.913 H15 YY3 51 
YY3 H16 H16 H 0 1 N N N N N N 5.120  -52.895 14.740 -2.750 -4.240 -0.045 H16 YY3 52 
YY3 H17 H17 H 0 1 N N N N N N 3.723  -52.295 13.784 -2.516 -4.083 -1.802 H17 YY3 53 
YY3 H18 H18 H 0 1 N N N N N N 4.605  -51.180 14.883 -1.480 -5.183 -0.861 H18 YY3 54 
YY3 H19 H19 H 0 1 N N N N N N -1.222 -48.528 15.743 -3.886 2.216  -1.006 H19 YY3 55 
YY3 H20 H20 H 0 1 N N N N N N -3.340 -47.742 16.681 -4.083 4.467  -0.060 H20 YY3 56 
YY3 H22 H22 H 0 1 N N N N N N -5.375 -48.180 18.133 -1.783 4.875  1.903  H22 YY3 57 
YY3 H23 H23 H 0 1 N N N N N N -4.685 -49.850 18.619 -3.112 6.101  1.423  H23 YY3 58 
YY3 H25 H25 H 0 1 N N N N N N -0.176 -50.959 18.131 -0.593 1.304  -0.163 H25 YY3 59 
YY3 H26 H26 H 0 1 N N N N N N 2.726  -53.253 17.849 0.963  -1.889 0.119  H26 YY3 60 
YY3 H27 H27 H 0 1 N N N N N N 2.258  -54.559 22.135 1.536  2.984  -1.829 H27 YY3 61 
YY3 H28 H28 H 0 1 N N N N N N 0.915  -52.792 23.245 3.954  2.739  -1.339 H28 YY3 62 
YY3 H29 H29 H 0 1 N N N N N N 0.564  -49.371 19.617 4.205  -2.070 0.778  H29 YY3 63 
YY3 H30 H30 H 0 1 N N N N N N -0.173 -47.085 19.026 5.733  -3.727 1.726  H30 YY3 64 
YY3 H31 H31 H 0 1 N N N N N N -1.611 -45.837 20.633 8.139  -3.249 1.895  H31 YY3 65 
YY3 H32 H32 H 0 1 N N N N N N -2.230 -46.907 22.784 9.042  -1.105 1.114  H32 YY3 66 
YY3 H33 H33 H 0 1 N N N N N N -2.161 -49.972 25.302 9.093  1.352  -1.065 H33 YY3 67 
YY3 H34 H34 H 0 1 N N N N N N -1.711 -48.250 25.059 8.483  2.664  -0.029 H34 YY3 68 
YY3 H35 H35 H 0 1 N N N N N N -3.191 -48.910 24.284 9.269  1.244  0.702  H35 YY3 69 
YY3 H36 H36 H 0 1 N N N N N N -0.734 -51.500 23.885 6.027  2.421  -0.883 H36 YY3 70 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YY3 C13 N2  SING N N 1  
YY3 N2  C11 SING N N 2  
YY3 N2  C12 SING N N 3  
YY3 C10 C11 SING N N 4  
YY3 C10 N1  SING N N 5  
YY3 C28 N1  SING N N 6  
YY3 N1  C2  SING N N 7  
YY3 C14 O1  SING N N 8  
YY3 C3  C2  DOUB Y N 9  
YY3 C3  C4  SING Y N 10 
YY3 C2  C1  SING Y N 11 
YY3 O1  C4  SING N N 12 
YY3 C4  C5  DOUB Y N 13 
YY3 C1  N   SING N N 14 
YY3 C1  C6  DOUB Y N 15 
YY3 N   C7  SING N N 16 
YY3 C7  C8  SING N N 17 
YY3 C7  O   DOUB N N 18 
YY3 C5  C6  SING Y N 19 
YY3 C5  N3  SING N N 20 
YY3 C8  C9  DOUB N N 21 
YY3 N3  C15 SING N N 22 
YY3 C15 N5  DOUB Y N 23 
YY3 C15 N4  SING Y N 24 
YY3 C24 C25 DOUB Y N 25 
YY3 C24 C23 SING Y N 26 
YY3 N5  C18 SING Y N 27 
YY3 N4  C16 DOUB Y N 28 
YY3 C25 C26 SING Y N 29 
YY3 C23 C22 DOUB Y N 30 
YY3 C18 C19 SING N N 31 
YY3 C18 C17 DOUB Y N 32 
YY3 C26 C19 SING Y N 33 
YY3 C26 C21 DOUB Y N 34 
YY3 C16 C17 SING Y N 35 
YY3 C19 C20 DOUB Y N 36 
YY3 C22 C21 SING Y N 37 
YY3 C21 N6  SING Y N 38 
YY3 C20 N6  SING Y N 39 
YY3 N6  C27 SING N N 40 
YY3 C13 H1  SING N N 41 
YY3 C13 H2  SING N N 42 
YY3 C13 H3  SING N N 43 
YY3 C12 H5  SING N N 44 
YY3 C12 H6  SING N N 45 
YY3 C12 H7  SING N N 46 
YY3 C11 H8  SING N N 47 
YY3 C11 H9  SING N N 48 
YY3 C10 H10 SING N N 49 
YY3 C10 H11 SING N N 50 
YY3 C28 H12 SING N N 51 
YY3 C28 H13 SING N N 52 
YY3 C28 H14 SING N N 53 
YY3 C3  H15 SING N N 54 
YY3 C14 H16 SING N N 55 
YY3 C14 H17 SING N N 56 
YY3 C14 H18 SING N N 57 
YY3 N   H19 SING N N 58 
YY3 C8  H20 SING N N 59 
YY3 C9  H22 SING N N 60 
YY3 C9  H23 SING N N 61 
YY3 C6  H25 SING N N 62 
YY3 N3  H26 SING N N 63 
YY3 C16 H27 SING N N 64 
YY3 C17 H28 SING N N 65 
YY3 C25 H29 SING N N 66 
YY3 C24 H30 SING N N 67 
YY3 C23 H31 SING N N 68 
YY3 C22 H32 SING N N 69 
YY3 C27 H33 SING N N 70 
YY3 C27 H34 SING N N 71 
YY3 C27 H35 SING N N 72 
YY3 C20 H36 SING N N 73 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YY3 SMILES           ACDLabs              12.01 "CN(CCN(c1cc(c(cc1NC(\C=C)=O)Nc2nc(ccn2)c3cn(c4c3cccc4)C)OC)C)C"                                                                                                                            
YY3 InChI            InChI                1.03  "InChI=1S/C28H33N7O2/c1-7-27(36)30-22-16-23(26(37-6)17-25(22)34(4)15-14-33(2)3)32-28-29-13-12-21(31-28)20-18-35(5)24-11-9-8-10-19(20)24/h7-13,16-18H,1,14-15H2,2-6H3,(H,30,36)(H,29,31,32)" 
YY3 InChIKey         InChI                1.03  DUYJMQONPNNFPI-UHFFFAOYSA-N                                                                                                                                                                 
YY3 SMILES_CANONICAL CACTVS               3.385 "COc1cc(N(C)CCN(C)C)c(NC(=O)C=C)cc1Nc2nccc(n2)c3cn(C)c4ccccc34"                                                                                                                             
YY3 SMILES           CACTVS               3.385 "COc1cc(N(C)CCN(C)C)c(NC(=O)C=C)cc1Nc2nccc(n2)c3cn(C)c4ccccc34"                                                                                                                             
YY3 SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "Cn1cc(c2c1cccc2)c3ccnc(n3)Nc4cc(c(cc4OC)N(C)CCN(C)C)NC(=O)C=C"                                                                                                                             
YY3 SMILES           "OpenEye OEToolkits" 1.9.2 "Cn1cc(c2c1cccc2)c3ccnc(n3)Nc4cc(c(cc4OC)N(C)CCN(C)C)NC(=O)C=C"                                                                                                                             
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
YY3 "SYSTEMATIC NAME" ACDLabs              12.01 "N-(2-{[2-(dimethylamino)ethyl](methyl)amino}-4-methoxy-5-{[4-(1-methyl-1H-indol-3-yl)pyrimidin-2-yl]amino}phenyl)prop-2-enamide" 
YY3 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "N-[2-[2-(dimethylamino)ethyl-methyl-amino]-4-methoxy-5-[[4-(1-methylindol-3-yl)pyrimidin-2-yl]amino]phenyl]prop-2-enamide"       
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YY3 "Create component" 2015-04-14 RCSB 
YY3 "Modify formula"   2015-04-14 RCSB 
YY3 "Initial release"  2015-11-11 RCSB 
YY3 "Modify synonyms"  2020-08-31 RCSB 
YY3 "Modify synonyms"  2021-03-13 RCSB 
YY3 "Modify PCM"       2024-09-27 PDBE 
# 
loop_
_pdbx_chem_comp_synonyms.ordinal 
_pdbx_chem_comp_synonyms.comp_id 
_pdbx_chem_comp_synonyms.name 
_pdbx_chem_comp_synonyms.provenance 
_pdbx_chem_comp_synonyms.type 
1 YY3 Osimertinib PDB ? 
2 YY3 "AZD 9291"  PDB ? 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            YY3 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C9 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
