data_UB3
# 
_chem_comp.id                                    UB3 
_chem_comp.name                                  "N-[(S)-({[(benzyloxy)carbonyl]amino}methyl)(hydroxy)phosphoryl]-L-valyl-L-leucine" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C20 H32 N3 O7 P" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2008-12-22 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        457.458 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     UB3 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3ELF 
_chem_comp.pdbx_subcomponent_list                "PHQ PGL VAL LEU" 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
UB3 C7   C7   C 0 1 N N N -12.844 41.021 8.871  3.682  -0.488 0.935  C1   PHQ 1  
UB3 O29  O29  O 0 1 N N N -13.004 42.140 8.416  3.156  0.385  1.597  O1   PHQ 2  
UB3 O6   O6   O 0 1 N N N -13.168 40.685 10.129 4.930  -0.313 0.460  O2   PHQ 3  
UB3 C5   C5   C 0 1 N N N -13.768 41.742 10.902 5.587  0.942  0.779  C2   PHQ 4  
UB3 C4   C4   C 0 1 Y N N -15.140 41.255 11.389 6.964  0.957  0.168  C3   PHQ 5  
UB3 C30  C30  C 0 1 Y N N -15.292 40.659 12.647 8.044  0.475  0.886  C4   PHQ 6  
UB3 C31  C31  C 0 1 Y N N -16.556 40.239 13.075 9.307  0.490  0.326  C5   PHQ 7  
UB3 C1   C1   C 0 1 Y N N -17.674 40.449 12.260 9.492  0.985  -0.952 C6   PHQ 8  
UB3 C2   C2   C 0 1 Y N N -17.529 41.073 11.017 8.412  1.465  -1.669 C7   PHQ 9  
UB3 C3   C3   C 0 1 Y N N -16.266 41.484 10.589 7.148  1.452  -1.109 C8   PHQ 10 
UB3 N8   N8   N 0 1 N N N -12.335 39.990 8.160  3.016  -1.630 0.675  N    PGL 11 
UB3 C9   C9   C 0 1 N N N -11.984 40.201 6.761  1.658  -1.820 1.191  C    PGL 12 
UB3 P10  P10  P 0 1 N N N -11.409 38.655 5.971  0.449  -1.337 -0.085 P    PGL 13 
UB3 O12  O12  O 0 1 N N N -12.496 37.642 6.124  0.641  -2.175 -1.289 O1   PGL 14 
UB3 O11  O11  O 0 1 N N N -10.203 38.182 6.703  0.665  0.212  -0.470 O2   PGL 15 
UB3 N13  N13  N 0 1 N N N -11.153 38.939 4.382  -1.111 -1.555 0.508  N    VAL 16 
UB3 C14  C14  C 0 1 N N S -9.961  38.322 3.748  -2.112 -1.079 -0.456 CA   VAL 17 
UB3 C18  C18  C 0 1 N N N -8.827  39.329 3.827  -3.286 -0.496 0.286  C    VAL 18 
UB3 O28  O28  O 0 1 N N N -7.693  38.911 3.679  -3.432 -0.726 1.468  O    VAL 19 
UB3 C15  C15  C 0 1 N N N -10.220 37.972 2.246  -2.585 -2.251 -1.319 CB   VAL 20 
UB3 C16  C16  C 0 1 N N N -10.236 39.241 1.357  -3.336 -3.258 -0.445 CG1  VAL 21 
UB3 C17  C17  C 0 1 N N N -9.231  36.935 1.656  -3.517 -1.733 -2.415 CG2  VAL 22 
UB3 N19  N19  N 0 1 N N N -9.074  40.645 4.048  -4.175 0.282  -0.364 N    LEU 23 
UB3 C20  C20  C 0 1 N N S -8.025  41.587 4.380  -5.254 0.938  0.378  CA   LEU 24 
UB3 C21  C21  C 0 1 N N N -8.391  42.466 5.546  -6.413 -0.013 0.526  C    LEU 25 
UB3 O22  O22  O 0 1 N N N -9.577  42.478 5.988  -6.345 -1.126 0.059  O    LEU 26 
UB3 C24  C24  C 0 1 N N N -7.288  42.278 3.240  -5.711 2.185  -0.382 CB   LEU 27 
UB3 C25  C25  C 0 1 N N N -7.815  42.413 1.803  -4.571 3.204  -0.423 CG   LEU 28 
UB3 C26  C26  C 0 1 N N N -9.356  42.408 1.641  -4.983 4.396  -1.288 CD1  LEU 29 
UB3 C27  C27  C 0 1 N N N -7.242  43.702 1.135  -4.265 3.685  0.996  CD2  LEU 30 
UB3 O23  O23  O 0 1 N N N -7.451  43.169 6.011  -7.522 0.375  1.176  OXT  LEU 31 
UB3 H5   H5   H 0 1 N N N -13.888 42.641 10.279 5.668  1.044  1.861  H21  PHQ 32 
UB3 H5A  H5A  H 0 1 N N N -13.129 41.986 11.763 5.002  1.770  0.378  H22  PHQ 33 
UB3 H30  H30  H 0 1 N N N -14.433 40.523 13.287 7.899  0.088  1.883  H41  PHQ 34 
UB3 H31  H31  H 0 1 N N N -16.669 39.753 14.033 10.150 0.111  0.885  H51  PHQ 35 
UB3 H1   H1   H 0 1 N N N -18.651 40.129 12.592 10.478 0.992  -1.391 H61  PHQ 36 
UB3 H2   H2   H 0 1 N N N -18.393 41.236 10.390 8.556  1.852  -2.668 H71  PHQ 37 
UB3 H3   H3   H 0 1 N N N -16.157 41.981 9.636  6.305  1.828  -1.669 H81  PHQ 38 
UB3 HN8  HN8  H 0 1 N N N -12.201 39.096 8.587  3.435  -2.327 0.146  HN1  PGL 39 
UB3 H9   H9   H 0 1 N N N -12.873 40.564 6.224  1.512  -2.868 1.452  H1   PGL 40 
UB3 H9A  H9A  H 0 1 N N N -11.178 40.947 6.707  1.517  -1.202 2.078  H2   PGL 41 
UB3 HO11 HO11 H 0 0 N N N -10.386 37.342 7.107  0.555  0.821  0.273  HO2  PGL 42 
UB3 HN13 HN13 H 0 0 N N N -11.952 38.588 3.894  -1.273 -2.520 0.752  H    VAL 43 
UB3 H14  H14  H 0 1 N N N -9.718  37.387 4.274  -1.668 -0.315 -1.093 HA   VAL 44 
UB3 H15  H15  H 0 1 N N N -11.215 37.503 2.238  -1.723 -2.738 -1.775 HB   VAL 45 
UB3 H16  H16  H 0 1 N N N -10.420 38.954 0.311  -4.227 -2.786 -0.031 HG11 VAL 46 
UB3 H16A H16A H 0 0 N N N -11.034 39.917 1.698  -3.627 -4.117 -1.049 HG12 VAL 47 
UB3 H16B H16B H 0 0 N N N -9.265  39.753 1.431  -2.688 -3.587 0.368  HG13 VAL 48 
UB3 H17  H17  H 0 1 N N N -9.482  36.747 0.602  -2.952 -1.108 -3.108 HG21 VAL 49 
UB3 H17A H17A H 0 0 N N N -8.205  37.327 1.724  -3.948 -2.576 -2.955 HG22 VAL 50 
UB3 H17B H17B H 0 0 N N N -9.303  35.996 2.224  -4.316 -1.144 -1.965 HG23 VAL 51 
UB3 HN19 HN19 H 0 0 N N N -10.015 40.977 3.979  -4.100 0.407  -1.322 H    LEU 52 
UB3 H20  H20  H 0 1 N N N -7.209  40.934 4.723  -4.893 1.227  1.366  HA   LEU 53 
UB3 H24  H24  H 0 1 N N N -7.154  43.314 3.584  -5.989 1.908  -1.399 HB2  LEU 54 
UB3 H24A H24A H 0 0 N N N -6.347  41.717 3.138  -6.572 2.623  0.123  HB3  LEU 55 
UB3 H25  H25  H 0 1 N N N -7.461  41.500 1.302  -3.682 2.737  -0.848 HG   LEU 56 
UB3 H26  H26  H 0 1 N N N -9.614  42.510 0.576  -5.872 4.863  -0.864 HD11 LEU 57 
UB3 H26A H26A H 0 0 N N N -9.762  41.462 2.027  -4.171 5.122  -1.318 HD12 LEU 58 
UB3 H26B H26B H 0 0 N N N -9.786  43.249 2.204  -5.201 4.053  -2.300 HD13 LEU 59 
UB3 H27  H27  H 0 1 N N N -7.627  43.786 0.108  -3.971 2.836  1.613  HD21 LEU 60 
UB3 H27A H27A H 0 0 N N N -7.551  44.584 1.715  -3.453 4.411  0.967  HD22 LEU 61 
UB3 H27B H27B H 0 0 N N N -6.144  43.645 1.111  -5.154 4.152  1.421  HD23 LEU 62 
UB3 HO23 HO23 H 0 0 N N N -7.776  43.696 6.732  -8.239 -0.270 1.245  HXT  LEU 63 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
UB3 C2  C1   DOUB Y N 1  
UB3 C1  C31  SING Y N 2  
UB3 C1  H1   SING N N 3  
UB3 C3  C2   SING Y N 4  
UB3 C2  H2   SING N N 5  
UB3 C3  C4   DOUB Y N 6  
UB3 C3  H3   SING N N 7  
UB3 C5  C4   SING N N 8  
UB3 C4  C30  SING Y N 9  
UB3 O6  C5   SING N N 10 
UB3 C5  H5   SING N N 11 
UB3 C5  H5A  SING N N 12 
UB3 C7  O6   SING N N 13 
UB3 N8  C7   SING N N 14 
UB3 O29 C7   DOUB N N 15 
UB3 C9  N8   SING N N 16 
UB3 N8  HN8  SING N N 17 
UB3 P10 C9   SING N N 18 
UB3 C9  H9   SING N N 19 
UB3 C9  H9A  SING N N 20 
UB3 N13 P10  SING N N 21 
UB3 P10 O12  DOUB N N 22 
UB3 P10 O11  SING N N 23 
UB3 O11 HO11 SING N N 24 
UB3 C14 N13  SING N N 25 
UB3 N13 HN13 SING N N 26 
UB3 C15 C14  SING N N 27 
UB3 C14 C18  SING N N 28 
UB3 C14 H14  SING N N 29 
UB3 C16 C15  SING N N 30 
UB3 C17 C15  SING N N 31 
UB3 C15 H15  SING N N 32 
UB3 C16 H16  SING N N 33 
UB3 C16 H16A SING N N 34 
UB3 C16 H16B SING N N 35 
UB3 C17 H17  SING N N 36 
UB3 C17 H17A SING N N 37 
UB3 C17 H17B SING N N 38 
UB3 O28 C18  DOUB N N 39 
UB3 C18 N19  SING N N 40 
UB3 N19 C20  SING N N 41 
UB3 N19 HN19 SING N N 42 
UB3 C24 C20  SING N N 43 
UB3 C20 C21  SING N N 44 
UB3 C20 H20  SING N N 45 
UB3 C21 O22  DOUB N N 46 
UB3 C21 O23  SING N N 47 
UB3 O23 HO23 SING N N 48 
UB3 C30 C31  DOUB Y N 49 
UB3 C30 H30  SING N N 50 
UB3 C31 H31  SING N N 51 
UB3 C25 C24  SING N N 52 
UB3 C24 H24  SING N N 53 
UB3 C24 H24A SING N N 54 
UB3 C27 C25  SING N N 55 
UB3 C26 C25  SING N N 56 
UB3 C25 H25  SING N N 57 
UB3 C26 H26  SING N N 58 
UB3 C26 H26A SING N N 59 
UB3 C26 H26B SING N N 60 
UB3 C27 H27  SING N N 61 
UB3 C27 H27A SING N N 62 
UB3 C27 H27B SING N N 63 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
UB3 SMILES           ACDLabs              12.01 "O=C(O)C(NC(=O)C(NP(=O)(O)CNC(=O)OCc1ccccc1)C(C)C)CC(C)C"                                                                                                                                              
UB3 SMILES_CANONICAL CACTVS               3.370 "CC(C)C[C@H](NC(=O)[C@@H](N[P](O)(=O)CNC(=O)OCc1ccccc1)C(C)C)C(O)=O"                                                                                                                                   
UB3 SMILES           CACTVS               3.370 "CC(C)C[CH](NC(=O)[CH](N[P](O)(=O)CNC(=O)OCc1ccccc1)C(C)C)C(O)=O"                                                                                                                                      
UB3 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "CC(C)C[C@@H](C(=O)O)NC(=O)[C@H](C(C)C)N[P@](=O)(CNC(=O)OCc1ccccc1)O"                                                                                                                                  
UB3 SMILES           "OpenEye OEToolkits" 1.7.0 "CC(C)CC(C(=O)O)NC(=O)C(C(C)C)NP(=O)(CNC(=O)OCc1ccccc1)O"                                                                                                                                              
UB3 InChI            InChI                1.03  "InChI=1S/C20H32N3O7P/c1-13(2)10-16(19(25)26)22-18(24)17(14(3)4)23-31(28,29)12-21-20(27)30-11-15-8-6-5-7-9-15/h5-9,13-14,16-17H,10-12H2,1-4H3,(H,21,27)(H,22,24)(H,25,26)(H2,23,28,29)/t16-,17-/m0/s1" 
UB3 InChIKey         InChI                1.03  NFEZDCCCWWWKAJ-IRXDYDNUSA-N                                                                                                                                                                            
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
UB3 "SYSTEMATIC NAME" ACDLabs              12.01 "N-[(S)-({[(benzyloxy)carbonyl]amino}methyl)(hydroxy)phosphoryl]-L-valyl-L-leucine"                                             
UB3 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "(2S)-2-[[(2S)-2-[[hydroxy(phenylmethoxycarbonylaminomethyl)phosphoryl]amino]-3-methyl-butanoyl]amino]-4-methyl-pentanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
UB3 "Create component"         2008-12-22 RCSB 
UB3 "Modify subcomponent list" 2011-03-28 RCSB 
UB3 "Modify aromatic_flag"     2011-06-04 RCSB 
UB3 "Modify descriptor"        2011-06-04 RCSB 
# 
