data_MD3
# 
_chem_comp.id                                    MD3 
_chem_comp.name                                  "N-(carboxycarbonyl)-S-(naphthalen-2-ylmethyl)-L-cysteine" 
_chem_comp.type                                  "L-peptide linking" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C16 H15 N O5 S" 
_chem_comp.mon_nstd_parent_comp_id               CYS 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2011-08-11 
_chem_comp.pdbx_modified_date                    2012-03-02 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        333.359 
_chem_comp.one_letter_code                       C 
_chem_comp.three_letter_code                     MD3 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3T4V 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
MD3 C16  C    C 0 1 Y N N -1.734 5.205  6.360  -4.839 -1.324 1.299  C16  MD3 1  
MD3 N    N    N 0 1 N N N -3.365 0.585  1.033  2.984  -0.349 0.252  N    MD3 2  
MD3 O05  O    O 0 1 N N N -1.500 -1.209 1.832  3.101  -3.036 0.941  O05  MD3 3  
MD3 SG   S    S 0 1 N N N -3.086 3.908  0.140  0.226  0.897  -0.184 SG   MD3 4  
MD3 C01  C01  C 0 1 N N N -2.151 -0.686 2.779  3.671  -2.691 -0.072 C01  MD3 5  
MD3 OXT  O01  O 0 1 N Y N -4.127 0.062  -1.430 4.384  3.056  0.082  OXT  MD3 6  
MD3 C02  C02  C 0 1 N N N -3.246 0.230  2.401  3.642  -1.258 -0.494 C02  MD3 7  
MD3 O    O02  O 0 1 N N N -4.706 2.122  -1.770 5.015  1.138  0.982  O    MD3 8  
MD3 CA   C03  C 0 1 N N R -4.395 1.406  0.496  2.956  1.056  -0.161 CA   MD3 9  
MD3 O03  O03  O 0 1 N N N -4.012 0.634  3.228  4.213  -0.912 -1.508 O03  MD3 10 
MD3 C    C04  C 0 1 N N N -4.407 1.196  -0.984 4.194  1.753  0.343  C    MD3 11 
MD3 O04  O04  O 0 1 N N N -1.918 -0.955 3.997  4.328  -3.598 -0.817 O04  MD3 12 
MD3 CB   C05  C 0 1 N N N -4.341 2.865  0.849  1.715  1.735  0.423  CB   MD3 13 
MD3 C06  C06  C 0 1 N N N -2.668 4.944  1.522  -1.117 1.829  0.603  C06  MD3 14 
MD3 C07  C07  C 0 1 Y N N -2.063 4.364  2.762  -2.443 1.245  0.191  C07  MD3 15 
MD3 C08  C08  C 0 1 Y N N -1.328 3.183  2.708  -3.083 1.730  -0.948 C08  MD3 16 
MD3 C09  C09  C 0 1 Y N N -0.740 2.694  3.868  -4.282 1.225  -1.348 C09  MD3 17 
MD3 C10  C10  C 0 1 Y N N -0.874 3.353  5.091  -4.886 0.198  -0.604 C10  MD3 18 
MD3 C11  C11  C 0 1 Y N N -2.191 5.038  3.970  -2.998 0.250  0.936  C11  MD3 19 
MD3 C12  C12  C 0 1 Y N N -1.594 4.539  5.139  -4.235 -0.297 0.555  C12  MD3 20 
MD3 C13  C13  C 0 1 Y N N -0.289 2.832  6.263  -6.123 -0.349 -0.985 C13  MD3 21 
MD3 C14  C14  C 0 1 Y N N -0.414 3.512  7.473  -6.681 -1.340 -0.236 C14  MD3 22 
MD3 C15  C15  C 0 1 Y N N -1.155 4.701  7.518  -6.039 -1.829 0.899  C15  MD3 23 
MD3 H16  H    H 0 1 N N N -2.300 6.124  6.404  -4.353 -1.713 2.181  H16  MD3 24 
MD3 H2   HN   H 0 1 N Y N -2.675 0.233  0.400  2.528  -0.625 1.063  H2   MD3 25 
MD3 HXT  HO01 H 0 1 N Y N -4.187 0.070  -2.378 5.193  3.459  0.427  HXT  MD3 26 
MD3 HA   H03  H 0 1 N N N -5.336 1.089  0.969  2.924  1.115  -1.249 HA   MD3 27 
MD3 HO04 HO04 H 0 0 N N N -1.207 -1.583 4.053  4.319  -4.513 -0.504 HO04 MD3 28 
MD3 HB2  H05  H 0 1 N N N -4.195 2.910  1.938  1.695  2.781  0.115  HB2  MD3 29 
MD3 HB3  H05A H 0 1 N N N -5.305 3.291  0.533  1.747  1.677  1.510  HB3  MD3 30 
MD3 H06  H06  H 0 1 N N N -1.934 5.670  1.142  -1.014 1.768  1.687  H06  MD3 31 
MD3 H06A H06A H 0 0 N N N -3.610 5.415  1.840  -1.066 2.872  0.291  H06A MD3 32 
MD3 H08  H08  H 0 1 N N N -1.216 2.652  1.774  -2.621 2.520  -1.522 H08  MD3 33 
MD3 H09  H09  H 0 1 N N N -0.165 1.781  3.822  -4.766 1.612  -2.232 H09  MD3 34 
MD3 H11  H11  H 0 1 N N N -2.757 5.957  4.011  -2.490 -0.116 1.816  H11  MD3 35 
MD3 H13  H13  H 0 1 N N N 0.258  1.902  6.223  -6.630 0.018  -1.865 H13  MD3 36 
MD3 H14  H14  H 0 1 N N N 0.055  3.127  8.366  -7.632 -1.758 -0.531 H14  MD3 37 
MD3 H15  H15  H 0 1 N N N -1.276 5.226  8.454  -6.499 -2.622 1.471  H15  MD3 38 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
MD3 C12 C16  DOUB Y N 1  
MD3 C16 C15  SING Y N 2  
MD3 C16 H16  SING N N 3  
MD3 CA  N    SING N N 4  
MD3 N   C02  SING N N 5  
MD3 N   H2   SING N N 6  
MD3 O05 C01  DOUB N N 7  
MD3 SG  CB   SING N N 8  
MD3 SG  C06  SING N N 9  
MD3 C02 C01  SING N N 10 
MD3 C01 O04  SING N N 11 
MD3 OXT C    SING N N 12 
MD3 OXT HXT  SING N N 13 
MD3 C02 O03  DOUB N N 14 
MD3 O   C    DOUB N N 15 
MD3 C   CA   SING N N 16 
MD3 CA  CB   SING N N 17 
MD3 CA  HA   SING N N 18 
MD3 O04 HO04 SING N N 19 
MD3 CB  HB2  SING N N 20 
MD3 CB  HB3  SING N N 21 
MD3 C06 C07  SING N N 22 
MD3 C06 H06  SING N N 23 
MD3 C06 H06A SING N N 24 
MD3 C08 C07  SING Y N 25 
MD3 C07 C11  DOUB Y N 26 
MD3 C08 C09  DOUB Y N 27 
MD3 C08 H08  SING N N 28 
MD3 C09 C10  SING Y N 29 
MD3 C09 H09  SING N N 30 
MD3 C10 C12  SING Y N 31 
MD3 C10 C13  DOUB Y N 32 
MD3 C11 C12  SING Y N 33 
MD3 C11 H11  SING N N 34 
MD3 C13 C14  SING Y N 35 
MD3 C13 H13  SING N N 36 
MD3 C14 C15  DOUB Y N 37 
MD3 C14 H14  SING N N 38 
MD3 C15 H15  SING N N 39 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
MD3 SMILES           ACDLabs              12.01 "O=C(O)C(=O)NC(C(=O)O)CSCc2ccc1c(cccc1)c2"                                                                                                     
MD3 InChI            InChI                1.03  "InChI=1S/C16H15NO5S/c18-14(16(21)22)17-13(15(19)20)9-23-8-10-5-6-11-3-1-2-4-12(11)7-10/h1-7,13H,8-9H2,(H,17,18)(H,19,20)(H,21,22)/t13-/m0/s1" 
MD3 InChIKey         InChI                1.03  TUTBXYUXRIILSH-ZDUSSCGKSA-N                                                                                                                    
MD3 SMILES_CANONICAL CACTVS               3.370 "OC(=O)[C@H](CSCc1ccc2ccccc2c1)NC(=O)C(O)=O"                                                                                                   
MD3 SMILES           CACTVS               3.370 "OC(=O)[CH](CSCc1ccc2ccccc2c1)NC(=O)C(O)=O"                                                                                                    
MD3 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 "c1ccc2cc(ccc2c1)CSC[C@@H](C(=O)O)NC(=O)C(=O)O"                                                                                                
MD3 SMILES           "OpenEye OEToolkits" 1.7.2 "c1ccc2cc(ccc2c1)CSCC(C(=O)O)NC(=O)C(=O)O"                                                                                                     
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
MD3 "SYSTEMATIC NAME" ACDLabs              12.01 "N-(carboxycarbonyl)-S-(naphthalen-2-ylmethyl)-L-cysteine"                      
MD3 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 "(2R)-2-(carboxycarbonylamino)-3-(naphthalen-2-ylmethylsulfanyl)propanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
MD3 "Create component" 2011-08-11 RCSB 
# 
