data_SA0
#

_chem_comp.id                                   SA0
_chem_comp.name                                 "2-(hydroxymethyl)phenyl beta-D-glucopyranoside"
_chem_comp.type                                 D-saccharide
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C13 H18 O7"
_chem_comp.mon_nstd_parent_comp_id              BGC
_chem_comp.pdbx_synonyms                        
;Salicin; 2-(hydroxymethyl)phenyl beta-D-glucoside; 2-(hydroxymethyl)phenyl D-glucoside; 2-(hydroxymethyl)phenyl
glucoside
;

_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2011-10-14
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       286.278
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    SA0
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3VIL
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  SA0  Salicin                                     PDB  ?  
2  SA0  "2-(hydroxymethyl)phenyl beta-D-glucoside"  PDB  ?  
3  SA0  "2-(hydroxymethyl)phenyl D-glucoside"       PDB  ?  
4  SA0  "2-(hydroxymethyl)phenyl glucoside"         PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
SA0  C1    C1    C  0  1  N  N  S  -27.123  83.523  14.840   0.453   0.503  -0.331  C1    SA0   1  
SA0  O1    O1    O  0  1  N  N  N  -27.004  84.067  13.500  -0.870   0.872   0.064  O1    SA0   2  
SA0  C2    C2    C  0  1  N  N  R  -28.569  83.277  15.319   1.411   1.663  -0.048  C2    SA0   3  
SA0  O2    O2    O  0  1  N  N  N  -29.092  84.488  15.860   1.033   2.797  -0.830  O2    SA0   4  
SA0  C3    C3    C  0  1  N  N  S  -28.784  82.158  16.346   2.836   1.239  -0.418  C3    SA0   5  
SA0  O3    O3    O  0  1  N  N  N  -30.192  81.886  16.437   3.748   2.289  -0.088  O3    SA0   6  
SA0  C4    C4    C  0  1  N  N  S  -28.050  80.918  15.872   3.202  -0.023   0.369  C4    SA0   7  
SA0  O4    O4    O  0  1  N  N  N  -28.283  79.829  16.766   4.502  -0.469  -0.021  O4    SA0   8  
SA0  C5    C5    C  0  1  N  N  R  -26.579  81.325  15.854   2.174  -1.118   0.070  C5    SA0   9  
SA0  O5    O5    O  0  1  N  N  N  -26.336  82.337  14.868   0.868  -0.647   0.408  O5    SA0  10  
SA0  C6    C6    C  0  1  N  N  N  -25.625  80.193  15.522   2.499  -2.362   0.899  C6    SA0  11  
SA0  O6    O6    O  0  1  N  N  N  -25.884  79.731  14.187   1.611  -3.421   0.535  O6    SA0  12  
SA0  OAA   OAA   O  0  1  N  N  N  -26.434  80.937  11.611  -4.898   1.649   1.096  OAA   SA0  13  
SA0  CAF   CAF   C  0  1  Y  N  N  -23.426  84.262  11.240  -3.892  -1.805  -0.787  CAF   SA0  14  
SA0  CAG   CAG   C  0  1  Y  N  N  -23.627  85.095  12.338  -2.589  -2.099  -1.143  CAG   SA0  15  
SA0  CAH   CAH   C  0  1  Y  N  N  -24.432  83.353  10.905  -4.185  -0.614  -0.148  CAH   SA0  16  
SA0  CAI   CAI   C  0  1  Y  N  N  -24.818  85.005  13.064  -1.575  -1.205  -0.859  CAI   SA0  17  
SA0  CAJ   CAJ   C  0  1  N  N  N  -26.671  82.285  11.202  -3.494   1.580   0.837  CAJ   SA0  18  
SA0  CAN   CAN   C  0  1  Y  N  N  -25.616  83.273  11.645  -3.175   0.283   0.139  CAN   SA0  19  
SA0  CAO   CAO   C  0  1  Y  N  N  -25.836  84.106  12.744  -1.866  -0.010  -0.217  CAO   SA0  20  
SA0  H1    H1    H  0  1  N  N  N  -26.757  84.271  15.559   0.463   0.274  -1.397  H1    SA0  21  
SA0  H2    H2    H  0  1  N  N  N  -29.095  82.935  14.416   1.370   1.920   1.010  H2    SA0  22  
SA0  HO2   HO2   H  0  1  N  Y  N  -29.983  84.344  16.157   0.138   3.117  -0.651  HO2   SA0  23  
SA0  H3    H3    H  0  1  N  N  N  -28.402  82.456  17.333   2.889   1.032  -1.487  H3    SA0  24  
SA0  HO3   HO3   H  0  1  N  Y  N  -30.341  81.194  17.070   3.571   3.122  -0.547  HO3   SA0  25  
SA0  H4    H4    H  0  1  N  N  N  -28.388  80.575  14.883   3.199   0.199   1.436  H4    SA0  26  
SA0  HO4   HO4   H  0  1  N  Y  N  -27.818  79.060  16.457   5.204   0.178   0.136  HO4   SA0  27  
SA0  H5    H5    H  0  1  N  N  N  -26.390  81.677  16.879   2.208  -1.368  -0.990  H5    SA0  28  
SA0  H61   H6    H  0  1  N  N  N  -24.588  80.553  15.592   3.527  -2.668   0.708  H61   SA0  29  
SA0  H62   H6A   H  0  1  N  N  N  -25.773  79.367  16.233   2.378  -2.135   1.958  H62   SA0  30  
SA0  HO6   HO6   H  0  1  N  Y  N  -25.288  79.022  13.976   1.759  -4.244   1.021  HO6   SA0  31  
SA0  HOAA  HOAA  H  0  0  N  N  N  -27.137  80.382  11.295  -5.175   2.459   1.544  HOAA  SA0  32  
SA0  HAF   HAF   H  0  1  N  N  N  -22.515  84.318  10.662  -4.684  -2.504  -1.014  HAF   SA0  33  
SA0  HAG   HAG   H  0  1  N  N  N  -22.867  85.806  12.627  -2.363  -3.030  -1.643  HAG   SA0  34  
SA0  HAH   HAH   H  0  1  N  N  N  -24.293  82.699  10.057  -5.203  -0.386   0.129  HAH   SA0  35  
SA0  HAI   HAI   H  0  1  N  N  N  -24.957  85.661  13.911  -0.557  -1.436  -1.136  HAI   SA0  36  
SA0  HAJ   HAJ   H  0  1  N  N  N  -26.706  82.301  10.103  -3.200   2.416   0.202  HAJ   SA0  37  
SA0  HAJA  HAJA  H  0  0  N  N  N  -27.631  82.603  11.634  -2.948   1.630   1.779  HAJA  SA0  38  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
SA0  C1   O1    SING  N  N   1  
SA0  C1   C2    SING  N  N   2  
SA0  C1   O5    SING  N  N   3  
SA0  O1   CAO   SING  N  N   4  
SA0  C2   O2    SING  N  N   5  
SA0  C2   C3    SING  N  N   6  
SA0  C3   O3    SING  N  N   7  
SA0  C3   C4    SING  N  N   8  
SA0  C4   O4    SING  N  N   9  
SA0  C4   C5    SING  N  N  10  
SA0  C5   O5    SING  N  N  11  
SA0  C5   C6    SING  N  N  12  
SA0  C6   O6    SING  N  N  13  
SA0  OAA  CAJ   SING  N  N  14  
SA0  CAF  CAG   DOUB  Y  N  15  
SA0  CAF  CAH   SING  Y  N  16  
SA0  CAG  CAI   SING  Y  N  17  
SA0  CAH  CAN   DOUB  Y  N  18  
SA0  CAI  CAO   DOUB  Y  N  19  
SA0  CAJ  CAN   SING  N  N  20  
SA0  CAN  CAO   SING  Y  N  21  
SA0  C1   H1    SING  N  N  22  
SA0  C2   H2    SING  N  N  23  
SA0  O2   HO2   SING  N  N  24  
SA0  C3   H3    SING  N  N  25  
SA0  O3   HO3   SING  N  N  26  
SA0  C4   H4    SING  N  N  27  
SA0  O4   HO4   SING  N  N  28  
SA0  C5   H5    SING  N  N  29  
SA0  C6   H61   SING  N  N  30  
SA0  C6   H62   SING  N  N  31  
SA0  O6   HO6   SING  N  N  32  
SA0  OAA  HOAA  SING  N  N  33  
SA0  CAF  HAF   SING  N  N  34  
SA0  CAG  HAG   SING  N  N  35  
SA0  CAH  HAH   SING  N  N  36  
SA0  CAI  HAI   SING  N  N  37  
SA0  CAJ  HAJ   SING  N  N  38  
SA0  CAJ  HAJA  SING  N  N  39  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
SA0  SMILES            ACDLabs               12.01  "O(c1c(cccc1)CO)C2OC(C(O)C(O)C2O)CO"  
SA0  InChI             InChI                 1.03   "InChI=1S/C13H18O7/c14-5-7-3-1-2-4-8(7)19-13-12(18)11(17)10(16)9(6-15)20-13/h1-4,9-18H,5-6H2/t9-,10-,11+,12-,13-/m1/s1"  
SA0  InChIKey          InChI                 1.03   NGFMICBWJRZIBI-UJPOAAIJSA-N  
SA0  SMILES_CANONICAL  CACTVS                3.370  "OC[C@H]1O[C@@H](Oc2ccccc2CO)[C@H](O)[C@@H](O)[C@@H]1O"  
SA0  SMILES            CACTVS                3.370  "OC[CH]1O[CH](Oc2ccccc2CO)[CH](O)[CH](O)[CH]1O"  
SA0  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.2  "c1ccc(c(c1)CO)O[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O"  
SA0  SMILES            "OpenEye OEToolkits"  1.7.2  "c1ccc(c(c1)CO)OC2C(C(C(C(O2)CO)O)O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
SA0  "SYSTEMATIC NAME"  ACDLabs               12.01  "2-(hydroxymethyl)phenyl beta-D-glucopyranoside"  
SA0  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.2  "(2R,3S,4S,5R,6S)-2-(hydroxymethyl)-6-[2-(hydroxymethyl)phenoxy]oxane-3,4,5-triol"  
#
_pdbx_chem_comp_related.comp_id            SA0
_pdbx_chem_comp_related.related_comp_id    BGC
_pdbx_chem_comp_related.relationship_type  "Carbohydrate core"
_pdbx_chem_comp_related.details            ?
#   #
loop_
_pdbx_chem_comp_atom_related.ordinal
_pdbx_chem_comp_atom_related.comp_id
_pdbx_chem_comp_atom_related.atom_id
_pdbx_chem_comp_atom_related.related_comp_id
_pdbx_chem_comp_atom_related.related_atom_id
_pdbx_chem_comp_atom_related.related_type
 1  SA0  C1   BGC  C1   "Carbohydrate core"  
 2  SA0  C2   BGC  C2   "Carbohydrate core"  
 3  SA0  C3   BGC  C3   "Carbohydrate core"  
 4  SA0  C4   BGC  C4   "Carbohydrate core"  
 5  SA0  C5   BGC  C5   "Carbohydrate core"  
 6  SA0  C6   BGC  C6   "Carbohydrate core"  
 7  SA0  O1   BGC  O1   "Carbohydrate core"  
 8  SA0  O2   BGC  O2   "Carbohydrate core"  
 9  SA0  O3   BGC  O3   "Carbohydrate core"  
10  SA0  O4   BGC  O4   "Carbohydrate core"  
11  SA0  O5   BGC  O5   "Carbohydrate core"  
12  SA0  O6   BGC  O6   "Carbohydrate core"  
13  SA0  H1   BGC  H1   "Carbohydrate core"  
14  SA0  H2   BGC  H2   "Carbohydrate core"  
15  SA0  H3   BGC  H3   "Carbohydrate core"  
16  SA0  H4   BGC  H4   "Carbohydrate core"  
17  SA0  H5   BGC  H5   "Carbohydrate core"  
18  SA0  H61  BGC  H61  "Carbohydrate core"  
19  SA0  H62  BGC  H62  "Carbohydrate core"  
20  SA0  HO2  BGC  HO2  "Carbohydrate core"  
21  SA0  HO3  BGC  HO3  "Carbohydrate core"  
22  SA0  HO4  BGC  HO4  "Carbohydrate core"  
23  SA0  HO6  BGC  HO6  "Carbohydrate core"  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
SA0  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
SA0  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
SA0  "CARBOHYDRATE ANOMER"                  beta      PDB  ?  
SA0  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
SA0  "Create component"          2011-10-14  PDBJ  
SA0  "Other modification"        2020-07-03  RCSB  
SA0  "Modify parent residue"     2020-07-17  RCSB  
SA0  "Modify synonyms"           2020-07-17  RCSB  
SA0  "Modify linking type"       2020-07-17  RCSB  
SA0  "Modify atom id"            2020-07-17  RCSB  
SA0  "Modify component atom id"  2020-07-17  RCSB  
SA0  "Modify leaving atom flag"  2020-07-17  RCSB  
##
