2024-11-13 REL PDBe PDBe PDBe 2019-09-20 2020-09-30 2020-09-30 2024-11-13 European Molecular Biology Organization (EMBO) 190-2016 Germany Alexander von Humboldt Foundation Germany European Union (EU) iNEXT (PID: 2227) Germany European Union (EU) Instruct-ERIC Pilot R&D Project (APPID: 232) Germany Kraushar ML Sprink T 60S, EBP1, neurodevelopment, neocortex, ribosome, 80S, peptide tunnel exit Kraushar ML Krupp F Harnett D Turko P Ambrozkiewicz MC Sprink T Imami K Gunnigmann M Zinnall U Vieira-Vieira CH Schaub T Munster-Wandowski A Burger J Borisova E Yamamoto H Rasin MR Ohler U Beule D Mielke T Tarabykin V Landthaler M Kramer G Vida I Selbach M Spahn CMT Mol.Cell US 81 304 2021 33357414 doi:10.1016/j.molcel.2020.11.037 1097-2765 2168 MOCEFL 6swa FULLOVERLAP Mus musculus postnatal day 0 brain neocortex 80S ribosome bound to Ebp1 Mus musculus postnatal day 0 brain neocortex 80S ribosome bound to Ebp1 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 Mus musculus CD1 brain neocortex cytoplasm 3.2 60S ribosomal protein L8 Mus musculus 0.027456157999999998 1 LEVO GRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEG IHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSA NRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAAR RTGRLRGTKTVQ P62918 60S ribosomal protein L3 Mus musculus 0.045223980000000004 1 LEVO SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVET PPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIR IIAHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP RKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFV HYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLKKD P27659 60S ribosomal protein L4 Mus musculus 0.041321762 1 LEVO CARPLISVYSEKGESSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGG GTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYK KTKEAVQLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAP GGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMMNTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNL RIMLKLNPYAKTMRRNTILRQARNHKLRVKKLEAAATALATKS Q9D8E6 60S ribosomal protein L5 Mus musculus 0.034129383 1 LEVO VKVVKNKAYFKRYQVRFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHEL PKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVNGGEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGAL KGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNNVTPDMMEEMYKKA HAAIRENPVYEKKPKREVKKKRWNRPKMSLAQKKDRVAQKKASFLRAQERAAES P47962 60S ribosomal protein L6 Mus musculus 0.02235933 1 LEVO TVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRRLRSSITPGTVLIILTGRHRGKRVVFLKQLDSGLLL VTGPLVINRVPLRRTHQKFVIATSTKVDISDVKIPKHLTDAYFKKKQLRKPRHQEGEIFDTEKEKYEITEQRKADQKAVD LQILPKIKAVPQLQGYLRSQFSLTNGMYPHKLVF P47911 60S ribosomal protein L7 Mus musculus 0.027674057 1 LEVO PETLKKKRRNFAELKVKRLRKKFALKTLRKARRKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIR IRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNSL IARSLGKFGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN P14148 60S ribosomal protein L7a Mus musculus 0.026705521 1 LEVO NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQ EKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKA RLGHLVHRKTCTTVAFTQVNSEDKGALAKLVEAIRTNYNDRYDEIRRHWGGNVLGPKSVARIAKLEKAKAKELA P12970 60S ribosomal protein L9 Mus musculus 0.021788369 1 LEVO MKTILSNQTVDIPENVEITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKWWGNRKELATVRTICSHVQNM IKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRTGVACSVSQAQKDELILEGNDIELVSNSAAL IQQATTVKNKDIRKFLDGIYVSEKGTVQQAD P51410 60S ribosomal protein L10 Mus musculus 0.02438176 1 LEVO RRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGK DGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGR QKIHISKKWGFTKFNADEFEDMVAEKRLIPDGCGVKYIPNRGPLDKWRALH Q6ZWV3 60S ribosomal protein L11 Mus musculus 0.019270317999999998 1 LEVO ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLK VREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQ KYDGIILPG Q9CXW4 60S ribosomal protein L13 Mus musculus 0.023617697 1 LEVO APSRNGMILKPHFHKDWQQRVDTWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEEL RVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPIRNVY KKEKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAEQD P47963 60S ribosomal protein L14 Mus musculus 0.016301475 1 LEVO VFRRYVEVGRVAYISFGPHAGKLVAIVDVIDQNRALVDGPCTRVRRQAMPFKCMQLTDFILKFPHSARQKYVRKAWEKAD INTKWAATRWAKKIDARERKAKMTDFDRFKVMKAKKMRNRIIKTEVKKLQRAAILKASP Q9CR57 60S ribosomal protein L15 Mus musculus 0.024076088 1 LEVO GAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATY GKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREM RGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR Q9CZM2 60S ribosomal protein L13a Mus musculus 0.022748413999999998 1 LEVO QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTV RGMLPHKTKRGQAALERLKVLDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA KMHYRKKKQILRLRKQAEKNVEKKICKFTEVLKTN P19253 60S ribosomal protein L17 Mus musculus 0.017758678 1 LEVO VRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPFRRYNGGVGRCAQAKQWGWTQG RWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKE Q9CPR4 60S ribosomal protein L18 Mus musculus 0.021411363 1 LEVO DIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKTAVVV GTVTDDVRILEVPKLKVCALRVSSRARSRILKAGGKILTFDQLALESPKGRGTVLLSGPRKGREVYRHFGKAPGTPHSHT KPYVRSKGRKFERARGRRASRGYKN P35980 60S ribosomal protein L18a Mus musculus 0.020631312000000002 1 LEVO MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGI WLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAAGKCRRPAVKQFHDSKIKFPLPHRVLR RQHKPRFTTKRPNTF P62717 60S ribosomal protein L21 Mus musculus 0.018274523 1 LEVO TNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIIVNKQVK GKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRHAAPPREAHFVRTNGKEPELLEPIPYEF O09167 60S ribosomal protein L22 Mus musculus 0.011738557 1 LEVO KQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNN LRDWLRVVANSKESYELRYFQ P67984 60S ribosomal protein L23 Mus musculus 0.013828294999999999 1 LEVO AKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRK DGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSIA P62830 60S ribosomal protein L24 Mus musculus 0.007381578 1 LEVO KVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQ Q8BP67 60S ribosomal protein L23a Mus musculus 0.013727181 1 LEVO KIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYD IDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII P62751 Ribosomal protein L26 Mus musculus 0.015161899 1 LEVO MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVI YIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQ Q4FZH2 60S ribosomal protein L27 Mus musculus 0.015647584 1 LEVO KFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMP TRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF Q5BLJ9 60S ribosomal protein L27a Mus musculus 0.016517418000000002 1 LEVO PSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRHYHLKRNQSFCPTVNLDKLWTL VSEQTRVNAAKNKTGVAPIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKGVGGACVLVA P14115 60S ribosomal protein L29 Mus musculus 0.007964323 1 LEVO AKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKKGLKKMQANNAKAVSARA P47915 60S ribosomal protein L30 Mus musculus 0.010811743 1 LEVO SINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEIEYYAMLAKTGVHHYSGNNIELGTACGKYYRVC TLAIIDPGDSDIIRSMP P62889 60S ribosomal protein L31 Mus musculus 0.012506581 1 LEVO NEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDED SPNKLYTLVTYVPVTTFKNLQTVNVD P62900 60S ribosomal protein L32 Mus musculus 0.015179215 1 LEVO AALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHMLPSGFRKFLVHN VKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLR P62911 60S ribosomal protein L35a Mus musculus 0.012449611999999999 1 LEVO SGRLWCKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGGKPNKTRVIWGKVTRAHGNS GMVRAKFRSNLPAKAIGHRIRVMLYPSRI O55142 60S ribosomal protein L34 Mus musculus 0.012993568999999998 1 LEVO VQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVRPKVLMRLSKTQKHVSRAYGGS MCAKCVRDRIKRAFLIEEQKIVVKVLKAQAQSQK Q9D1R9 60S ribosomal protein L35 Mus musculus 0.014464507 1 LEVO AKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPL DLRPKKTRAMRRRLTKHEEKLKTKKQQRKERLYPLRKYAVKA Q6ZWV7 60S ribosomal protein L36 Mus musculus 0.011489695 1 LEVO RYPMAVGLNKGHKVTKNVSKPRHSRRRSRLTNHTKFVRDMIREVCGFAPYERRAMELLKVSKSKRALKFIKKRVGTHIRA KRKREELSNVLAAMEEAA P47964 60S ribosomal protein L37 Mus musculus 0.009864596 1 LEVO TKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRMRHLKIVYRRFRHGFREG TTPK Q9D823 60S ribosomal protein L38 Mus musculus 0.008093725999999999 1 LEVO PRKIEEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKAEKLKQSLPPGLAVKDLK Q9JJI8 Ribosomal protein L39 Mus musculus 0.006295561999999999 1 LEVO SSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLGL Q505A8 60S ribosomal protein L40 Mus musculus 0.005957237 1 LEVO IEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKV Q5M9K3 60S ribosomal protein L41 Mus musculus 0.003473451 1 LEVO MRAKWRKKRMRRLKRKRRKMRQRSK P62947 Ribosomal protein L36A Mus musculus 0.012345776 1 LEVO VNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKR MLAIKRCKHFELGGDKKRKGQVIQF Q5M9P1 Ribosomal protein L37a Mus musculus 0.010168153 1 LEVO AKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCMKTVAGGAWTYNTTSAVTVKS AIRRLKELKDQ Q4VAF2 60S ribosomal protein L19 Mus musculus 0.022097578 1 LEVO SMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKR KGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEA RRSKTKEARKRREERLQAKKEEII P84099 60S ribosomal protein L28 Mus musculus 0.014009404 1 LEVO SAHLQWMVVRNCSSFLIKRNKQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKGVVVVMKRRSGQRKPATSYVRTT INKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAILRSQKP P41105 28S ribosomal RNA Mus musculus 1.170200875

We used the Oryctolagus cuniculus sequence to model the Mus musculus 28S ribosomal RNA

1 CGCGACCUCAGAUCAGACGUGGCGACCCGCUGAAUUUAAGCAUAUUAGUCAGCGGAGGAAAAGAAACUAACCAGGAUUCC CUCAGUAACGGCGAGUGAACAGGGAAGAGCCCAGCGCCGAAUCCCCGCCGCGCGGGGCGUGGGAAAUGUGGCGUACGGAA GACCCACUCCCCGGCGCCGCUCGUGGGGGGCCCAAGUCCUUCUGAUCGAGGCCCAGCCCGUGGACGGUGUGAGGCCGGUA GCGGCCCCGGCGCCGGGCUCGGGUCUUCCCGGAGUCGGGUUGCUUGGGAAUGCAGCCCAAAGCGGGUGGUAAACUCCAUC UAAGGCUAAAUACCGGCACGAGACCGAUAGUCAACAAGUACCGUAAGGGAAAGUUGAAAAGAACUUUGAAGAGAGAGUUC AAGAGGGCGUGAAACCGUUAAGAGGUAAACGGGUGGGGUCCGCGCAGUCCGCCCGGAGGAUUCAACCCGGCGGCGGGUCC GGCCGUGUCGGCGGCCCGGCGGAUCUUUCCCGCCCCCGGGGUCGGCGGGGGACCGUCCCCCGGACCGGCGACCGGCCGCC GCCGGGCGCAUUUCCAGGCGGUGCGCCGCGACCGGCUCCGGGACGGCUGGGAAGGCCCGGCGGGGAAGGUGGCUCGGGGC CCCCGAGUGUUACAGCCCCCCCGGCAGCAGCACUCGCCGAAUCCCGGGGCCGAGGGAGCGAGACCCGUCGCCGCGCUCUC CCCCCUGGGGGGGCCGGGCCACCCCUCCCACGGCGCGACCGCUCUCCCAGGGGGCGGGGCGGACUGUCCCCAGUGCGCCC CGGGCGGGUCGCGCCGUCGGGCCCGGGGGGCCACGCGCGCGUCCCGGGACGGCGGAGCGAGCGCACGGGGUCGGCGGCGA CGUCGGCUACCCACCCGACCCGUCUUGAAACACGGACCAAGGAGUCUAACACGUGCGCGAGUCGGGGGCUCGCACGAAAG CCGCCGUGGCGCAAUGAAGGUGAAGGCCGGCGCGCUCGCCGGCCGAGGUGGGAUCCCGAGGCCUCUCCAGUCCGCCGAGG GGCACCACCGGCCCGUCUCGCCCGCCGCGCCGGGGAGGUGGAGCACGAGCGCACGUGUUAGGACCCGAAAGAUGGUGAAC UAUGCCUGGGCAGGGCGAAGCCAGAGGAAACUCUGGUGGAGGUCCGUAGCGGUCCUGACGUGCAAAUCGGUCGUCCGACC UGGGUAUAGGGGCGAAAGACUAAUCGAACCAUCUAGUAGCUGGUUCCCUCCGAAGUUUCCCUCAGGAUAGCUGGCGCUCU CGCCCACGCAGUUUUAUCCGGUAAAGCGAAUGAUUAGAGGUCUUGGGGCCGAAACGAUCUCAACCUAUUCUCAAACUUUA AAUGGGUAAGAAGCCCGGCUCGCUGGCGUGGAGCCGGGGUGGAAUGCGAGUGCCUAGUGGGCCACUUUUGGUAAGCAGAA CUGGCGCUGCGGGAUGAACCGAACGCCGGGUUAAGGCGCCCGAUGCCGACGCUCAUCAGACCCCAGAAAAGGUGUUGGUU GAUAUAGACAGCAGGACGGUGGCCAUGGAAGUCGGAAUCCGCUAAGGAGUGUGUAACAACUCACCUGCCGAAUCAACUAG CCCUGAAAAUGGAUGGCGCUGGAGCGUCGGGCCCAUACCCGGCCGUCGCCGGCCUACGCCGCGACGAGUAGGAGGGCCGC UGCGGUGAGCCUUGAAGCCUAGGGCGCGGGCCCGGGUGGAGCCGCCGCAGGUGCAGAUCUUGGUGGUAGUAGCAAAUAUU CAAACGAGAACUUUGAAGGCCGAAGUGGAGAAGGGUUCCAUGUGAACAGCAGUUGAACAUGGGUCAGUCGGUCCUGAGAG AUGGGCGAGCGCCGUUCCGAAGGGACGGGCGAUGGCCUCCGUUGCCCUCGGCCGAUCGAAAGGGAGUCGGGUUCAGAUCC CCGAAUCCGGAGUGGCGGAGAUGGGCGCCGCGAGGCGUCCAGUGCGGUAACGCGACCGAUCCCGGAGAAGCCGGCGGGAG CCCCGGGGAGAGUUCUCUUUUCUUUGUGAAGGGCAGGGCGCCCUGGAAUGGGUUCGCCCCGAGAGAGGGGCCCGUGCCUU GGAAAGCGUCGCACCUUUGCUGGGGUCCGGUGAGCUCUCGCUGGCCCUUGAAAAUCCGGGGGAGAGGGUGUAAAUCUCGC GCCGGGCCGUACCCAUAUCCGCAGCAGGUCUCCAAGGUGAACAGCCUCUGGCAUGUUGGAACAAUGUAGGUAAGGGAAGU CGGCAAGCCGGAUCCGUAACUUCGGGAUAAGGAUUGGCUCUAAGGGCUGGCAGCCGACUUAGAACUGGUGCGGACCAGGG GAAUCCGACUGUUUAAUUAAAACAAAGCAUCGCGAAGGCCCGCGGCGGGUGUUGACGCGAUGUGAUUUCUGCCCAGUGCU CUGAAUGUCAAAGUGAAGAAAUUCAAUGAAGCGCGGGUAAACGGCGGGAGUAACUAUGACUCUCUUAAGGUAGCCAAAUG CCUCGUCAUCUAAUUAGUGACGCGCAUGAAUGGAUGAACGAGAUUCCCACUGUCCCUACCUACUAUCCAGCGAAACCACA GCCAAGGGAACGGGCUUGGCGGAAUCAGCGGGGAAAGAAGACCCUGUUGAGCUUGACUCUAGUCUGGCACGGUGAAGAGA CAUGAGAGGUGUAGAAUAAGUGGGAGGCCCGGGCCGCCGGUGAAAUACCACUACUCUGAUCGUUUUUUCACUGACCCGGU GAGGCGGGGGGGCGAGCCCGAGGGGCUCUCGCUUCUGGCGCCAAGCGCCCGCCCGGCCGGGCGCGACCCGCUCCGGGGAC AGUGCCAGGUGGGGAGUUUGACUGGGGCGGUACACCUGUCAAACGGUAACGCAGGUGUCCUAAGGCGAGCUCAGGGAGGA CAGAAACCUCCCGUGGAGCAGAAGGGCAAAAGCUCGCUUGAUCUUGAUUUUCAGUACGAAUACAGACCGUGAAAGCGGGG CCUCACGAUCCUUCUGACCUUUUGGGUUUUAAGCAGGAGGUGUCAGAAAAGUUACCACAGGGAUAACUGGCUUGUGGCGG CCAAGCGUUCAUAGCGACGUCGCUUUUUGAUCCUUCGAUGUCGGCUCUUCCUAUCAUUGUGAAGCAGAAUUCGCCAAGCG UUGGAUUGUUCACCCACUAAUAGGGAACGUGAGCUGGGUUUAGACCGUCGUGAGACAGGUUAGUUUUACCCUACUGAUGA UGUGUUGUUGCCAUGGUAAUCCUGCUCAGUACGAGAGGAACCGCAGGUUCAGACAUUUGGUGUAUGUGCUUGGCUGAGGA GCCAAUGGGGCGAAGCUACCAUCUGUGGGAUUAUGACUGAACGCCUCUAAGUCAGAAUCCCGCCCAGGCGGAACGAUACG GCAGCGCCGCGGAGCCUCGGUUGGCCUCGGAUAGCCGGUCCGGGGUCCGGUGCGGAGUGCCCUUCGUCCUGGGAAACGGG GCGCGGCCGGAAAGGCGGCCGCCCCCUCGCCCGUCACGCACCGCACGUUCGUGGGGAACCUGGCGCUAAACCAUUCGUAG ACGACCUGCUUCUGGGUCGGGGUUUCGUACGUAGCAGAGCAGCUCCCUCGCUGCGAUCUAUUGAAAGUCAGCCCUCGACA CAAGGGUUUGUC 5.8S ribosomal RNA Mus musculus 0.050449812

We used the Oryctolagus cuniculus sequence to model the Mus musculus 5.8S ribosomal RNA

1 CGACUCUUAGCGGUGGAUCACUCGGCUCGUGCGUCGAUGAAGAACGCAGCUAGCUGCGAGAAUUAAUGUGAAUUGCAGGA CACAUUGAUCAUCGACACUUCGAACGCACUUGCGGCCCCGGGUUCCUCCCGGGGCUACGCCUGUCUGAGCGUCGCUU AB114630.1 5S ribosomal RNA Mus musculus 0.038385749999999996

We used the Oryctolagus cuniculus sequence to model the Mus musculus 5S ribosomal RNA

1 GUCUACGGCCAUACCACCCUGAACGCGCCCGAUCUCGUCUGAUCUCGGAAGCUAAGCAGGGUCGGGCCUGGUUAGUACUU GGAUGGGAGACCGCCUGGGAAUACCGGGUGCUGUAGGCU XR_003947739.1 Proliferation-associated protein 2G4 Mus musculus 0.039388097999999996 1 LEVO QEQTIAEDLVVTKYKMGGDIANRVLRSLVEASSSGVSVLSLCEKGDAMIMEETGKIFKKEKEMKKGIAFPTSISVNNCVC HFSPLKSDQDYILKEGDLVKIDLGVHVDGFIANVAHTFVIGVAQGTQVTGRKADVIKAAHLCAEAALRLVKPGNQNTQVT EAWNKVAHSFNCTPIEGMLSHQLKQHVIDGEKTIIQNPTDQQKKDHEKAEFEVHEVYAVDVLVSSGEGKAKDAGQRTTIY KRDPSKQYGLKMKTSRAFFSEVERRFDAMPFTLRAFEDEKKARMGVVECAKHELLQPFNVLYEKEGEFVAQFKFTVLLMP NGPMRITSGPFEPDLYKSEMEVQDAELKALLQS P50580 MAGNESIUM ION 2.4305e-05 247 MG ZINC ION 6.5409e-05 3 ZN singleParticle particle 7.4 20.0 HEPES 100.0 KCl potassium chloride 10.0 MgCl2 magnesium chloride 20.0 Dithiothreitol 0.04 Spermine 0.5 Spermidine 0.1 cycloheximide Quantifoil R3/3 COPPER 100 CARBON HOLEY 2.0 GLOW DISCHARGE ETHANE 100 277 FEI VITROBOT MARK II FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 2.7 0.5 2.5 31000.0 FEI TITAN KRIOS AUTOGRID HOLDER NITROGEN GIF Quantum LS GATAN K2 SUMMIT (4k x 4k) 5379 20.0 31.78 1 208206 C1 3.1 FSC 0.143 CUT-OFF SPARX 208206 COMMON LINE SPHIRE COMMON LINE SPARX SPARX