2024-11-13 REL PDBe PDBe PDBe 2019-08-03 2019-09-18 2019-09-18 2024-11-13 Swiss National Science Foundation Switzerland Saurer M Ramrath DJF mitochondrial ribosome, assembly intermediate, translation, RIBOSOME Saurer M Ramrath DJF Niemann M Calderaro S Prange C Mattei S Scaiola A Leitner A Bieri P Horn EK Leibundgut M Boehringer D Schneider A Ban N Science US 365 1144 1149 2019 31515389 doi:10.1126/science.aaw5570 1095-9203 0038 SCIEAS 6sga FULLOVERLAP Body domain of the mt-SSU assemblosome Body domain of the mt-SSU assemblosome 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 Trypanosoma brucei brucei Lister strain 427 uS5m Trypanosoma brucei brucei Lister strain 427 0.050147355

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

1 LEVO MFRLTAASQKNLNSWYTKGTMRGGVPRIYYAWMRPGSFTRRRFEKMRNPFVDLETGTSLYFRDTRDSAEAIAHAADSKGI KGMDNAIDLYNEYRIVPDLYPEGFQWKHKLNTEYNQWRSNTWLTPDLIPKEHRGRFLCNFQLNIVAYDMRVVKFSPKDHR QWIYCVLYVGSGKGIAGWGRAVAPSTQEAKKEAIREAFSNIIAVDLEQEGPMYPVRVNADGVRVLLYPARRIVANFRVAD ILCAFGFQHAGCRINLKATNNPKSPTHTVEGVFEAVKALRSVSEIAASRGKVPHSLIYNIYPYLEEIRRRKGMMAMHPPG KDGLLMPDRVVDNRLPDHLKRGYYDDVYWKDFFAGSDEHLNEPRMGLRGDEMRRRLEEAQTSPAPTTAKDTRRRTLEDVL KRLGKTTRDLGSIPIVNPRVDVGLPTHIKRNYQLH bS6m Trypanosoma brucei brucei Lister strain 427 0.018861543

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

1 LEVO MVFYSFVLVMKPRQRRFTSQALREIGVAVYSNGGLIRSITNEGIMRPYSRFRDADNTPLTYARYIILQLDMGEEEMGKVD KIIREHQDVLMALKLNNLERPVGIRSGNKELQAAYFPLDTFTRLEEEINWSPQTSADIYTQLEMNWKEFSRTRWSSFLRN Q38BW5 uS8m Trypanosoma brucei brucei Lister strain 427 0.032766459

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

1 LEVO MLRQSLLSLAKVYGAVPPLGAAQGHRLLHGKREREGSLFAVANDVKRDERLLRQQLNALLEEERMPMQARLQRNEAVSSH EAVPQTPLVDLPGVERRRDLPADPITRLFFQHKGDHALYYGTYDKPSVQDDDRVQIEKRVPRRREENLYTPIYDFCHRIR EATEQRKRFVVVPSTIETRGCARVMHDHGLVAGFRDFHNDRAFAVELKYFQGDSTINVIEPCSYDGRTEFEWSPKMMRRL LNTHGIHNRLVVYICRTADNRIIDHIHAVKENIGGRGLMMVH uS11m Trypanosoma brucei brucei Lister strain 427 0.03795396499999999

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

1 LEVO MMRKSVTFLRRGKPRPRAGMFPDKYRRVPMLLKPQQGGQQYFNHFLIRSTNDRLTQQDVDNASGQAHSFISPQLPQMDWR NMSARSSEESIREEMRQLAENDVMQHQRVFNERMWYEKEEEHRMKARSCPEETSEHAISNDGAVPPPRVLGGDYFKTRFG YSLVKNSEMTQGPVDYSQLDMWGEMPRYTSDMVFLYLVSRRRNTYAVAYTYEGKRILNTYTAGNRGLKGGDRGFRSEGST DNGHQVTSMYLNDLLPKLREMRASEGRPMGRGEKVELVVRVMGFYNGRQGAVRAVQDRANEFHVRYFEDITPFPLNGPKM PRGVFK Q389T7 uS15m Trypanosoma brucei brucei Lister strain 427 0.050401191

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

1 LEVO MFVRSFCFLRKYGSKSKTPDLKTSFTKTTNFRKAEKISITTTDGEIVKGRGKIRRRTHSALKEAIGAMEHPAIWLWYPWR MNPEPPTPHMPQRRALKNVHGAVFNDLTPVQKKRQEQMLYGVNIPETRQMKFEEQHPLLAGALRKLEGQPKGFPFWYRKY PTRRHAYEYRFSIPVEMLDGYNDDVKKALSKGMMSIQEKQFAQEAMYMERYAEHDFDTTSPAVLAVKRALKCRVLRNHLL TNPHNNIIKTVLANTERKLNHALRRLRKVDFKKYWEIIRDHDVQDILQPPNLVTYRQGSYWKYDWNAGLAISTNLADVMD PRGLNGCVETGRSRSEVARDLGLSYTRPLHENEKKQLSHQAVYYERLAKFKMEQPEAARAMERERFVRKFSGMFVKMDIR SGAPDFPSTYRRLLGTKVVRWASKRHGPN Q4GZ99 bS16m Trypanosoma brucei brucei Lister strain 427 0.022077805

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

1 LEVO MQVTETVLARAVIKRRSPQLWGAPGAPIIRMRGHHVVWKFQSYDLVVEHTHKRRNSDIRLLHYLGKHCPHPQKSLWSPDT PVAQDRHLFMLTTVDIDAFKYWFGVKRCRLSMKPWALLAKAGLLPPSLTQNSKIMPKPLFDKESLMRYYLANRKDEDVMA REKYLNYENSMVKTEEERAAERPVAPYL Q384N9 uS17m Trypanosoma brucei brucei Lister strain 427 0.039012413999999995

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence; C-terminal PTP-tag

1 LEVO MLRRSLLAFPWWNFQTEHRQRCVLMYGGARTKNTHNANHRVFIKKYKRNAFPNRTRHHWAVSMTGVLSQRPRRMPWPYDL TSLIFNQPRQGSDKIGYVVGTSMLKTAVVATNHMVYYPKFNQRVSRTKRFFAHDEDLACVEGDLVHIKQCRKISKYKHYY VFSILEPNVEGRERLKLGLKAVPPPLFGYPVSRRIVKLNLTSTEGTQEKLAAAIQEHVQDAYRFSGPTPDQPRNRLADPV TFEDANNMIAPNAPAAAALDASDSPPLLDRGEYTEVEQDTRNKKGDDYWMNLQPKEKYDFKSFKKSPRPLEDQVDPRLID GKYDIPTTASENLYFQ bS18m Trypanosoma brucei brucei Lister strain 427 0.036988691

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

1 LEVO MNRTGGSIYAHALSQFAVCRQPWNEYIGLLTKQDSTPYHTEPQEKPAYRGRKQGREGWLFGQQVQLHYHRFPDEQLITNL SRWRTGETVGDIAMQQFRNAQPFDIEDKDPQGVQRPSPEVYMKLNYKNPATISRFLTRTGHMYPADILPLNPEAVVKLRV AKAQAIRIGLYPRFGNPFWFRSQKFRPKAYQENYDPTTYSTKRTVEHFAYNWVQTDRIRRYFRELEAVHTSGSASARGSG GGTTAEHKQQDQFYSPENQPISLHRNNISYMEDVGRSVKNPTVPGLMSTKGMKKKFHNLYSSTSTKRMGFSNPTLGIKKV mS22 Trypanosoma brucei brucei Lister strain 427 0.073064141

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

1 LEVO MLRRAYIQRRYPFNKRGPREHKSWKHHVLTEPPKPLQWRDPKVWTRDLSVMKSFDAPQWDLWQSRPRSEDMDEALQPFMD MPKSLKDRRYDIPWWANPFGAWYLQNILSLELLKLKSKTNAEKIATYRSYMRSLASGKDNTMSDDDVIRNIIKERWKTLE FGDRNAGYPCTFGDYIQFLNEWFKSLDEEGMQRLREHFDRRIRPLLAVMSPVDILWLEALTQNSPHNKEQLQRKIAFQTS LGTPEFFDMSKRLRYEINEDYKVRDELGPELFALWSKAPERWPPERLSKMYGLDFTLVRKILVWHHFKACYDACVEPDWS LPKRLFALEWIRDVRARKHGLFYGKMRFAEQKITFYSDRFLFRDLVNRREASYANVWEMDDPYRFLQTEQDYEDYWGDNY DVYRRMFPEMIGRTGEPVQQYGQMPIWAGPHRQHANKSEHNWMFAEIGVNVGHEALKKLELDPTNEKRRRFVIRQPDGTL RSAKMSEMRAWYWKEEWADFRFWAPQMEWGIENTPSQEQYQEHVPDTTDADFRKQRRIQSRPVKWFYESHYTRTGSFAGF QPLRFMQRRTEREVRWPDVINAAVQIQKRKPAAYIFKAIPEL Q38DR3 mS23 Trypanosoma brucei brucei Lister strain 427 0.035358805

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

1 LEVO MRQCVVRRYKMPKNMGVAPRFDTWNEKYEPWEHMKRMGRLVGTGFYIPPEWYNHFRMFPPINHNFQQEKTLNPHNASEPT QDDTSTLSPERVALRDELARKSRLVASEGMRYYNIFWVRKPLDTMEKEYYELKRRGVDHGEAIRKVLQGFYSGLAVKKRV AAIQAEEAKLTGRFITMREATVVLGVLAKLHKEQLTPHQVSLLAKEQGETTQSGAKLTAIVSRTQPHVNKEASSPATSEA VGSSTEESLSADALASMLSEDGEQSAVGTRYQVEVKETANDSVRQLREKAEDQTGFPDWYTGESPTYSGTS mS26 Trypanosoma brucei brucei Lister strain 427 0.051136684

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

1 LEVO MMRSSSFCRRQIRPYYNLPSKSEHGRKMTGFLTPYRHWMWKQNELWRNVHEAQFEHLRRVYKRQWLESFRVNADEYIYKY NITKAAQLAQWECEMKEQEKKRIEARQMMDGRQALKKKHLDLLREFHERQFFFWYERASERLQNMNLINYVPHAQLREHI DKELDKYVAGKNEPYPLNFVGQMPFLEDGDGNIVEVPESLLSNHMAEHPDSTAKPHEPHTSSSISEAAAFEERMLRAMVS AKEEDLKEWLGDDSRALSETIDDISREEEEREADIRVARSMEETDAEREVSRRAYIERGKTGSRSIFRPPTVSEGAGGTP SAPAGDANTPMRRRKKGKLDRVHALQAHQDELLAKLSSQGLKEGVDASSVPERGKIVQSRGRIRDKAVIPTHEVLMQKPE LAAGSTPGARIQTKDMVDKMYHRGKYKKSGSGDKSDGEDL Q38DK6 mS34 Trypanosoma brucei brucei Lister strain 427 0.02872818

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

1 LEVO MLRCARVALRADPLNGGSSMTLGSKGSKLSPEPHRRRMPWTAAKEYVPGVVLNARDKMVLDGVQLLDIESIDRASQLDPL EVLRAVVATREYNISTGKNIFQLASQATYNGRGQRFYRKEWQEGTYDKYVTLSAIDFDRDGNKGTAYGYITFHGETTTRP VQVDFADVPGWYMDFVEERAVPFTGIVPPPPSIGTDVPVDPHSYRLKAYPYYDAPNPPEFVERLLKDRGVLPDTPTETAD VDKDPTTSDGSVHYDGK Q57UK0 mS38 Trypanosoma brucei brucei Lister strain 427 0.028240599999999998

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

1 LEVO MRAGCVACSRIPKLGIAALGSTTTSMQATCQETQELRCATTQMAPAVIFPLPPPLRGSYIDRKPTAASFNEHHATASFRH HMIASADVSHRPRHFYFASGTRNDTGTRSVKEGERKQLKQQTNVEVDSVAYGDQLDELSARWAAKFYGQVTFGPRNYPYP SSRWLARRFQMKKHRIIKRFRFRRYKLAAVANLPFAKMIRVGMLPELKSSKTKRGDVVDPTLSGQLVSAVKNTGEKRKGQ RTRPKSKYQV Q57VQ9 mS41 Trypanosoma brucei brucei Lister strain 427 0.022421469

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

1 LEVO MLKRTLTVLDQTYGPHKSYKYTYMPDPRKLAPIETTQRSEIVPQSIRPPTSYVPNHETFLERADIHRLRPTSDFKASFKD WNDLFTCDKRQLRVRGIPRMTRDAIRTAVQAFQNGNPPERFDTKEEWLYYKQFKTVDYSYRVIPELPEKYRPHQSGIDQA PLPDYREINKMPQWAECEERRQSKKTV Q389L3 mS51 (KRIPP1) Trypanosoma brucei brucei Lister strain 427 0.09508099199999999

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

1 LEVO MLRCTVVGHHRSGKARAFVFRDPSLRMMRAGSGYQQLRRMGMPMQVGMGWRKVDSFHANTQYQHAWPLLSHDDLGNSDQS NNTKNIMYSMYMPKRNKGTAPWFRGADTYSVKYCEQGRYEYQRYLMINRFPSEYKKHFLSFLSNIRMSSGSATIPQEALH WLLRMIVDNFNPQHVHYIAAMKTLQSAGELDMARDVWKIMERQQTWPCTATICAYLDVCVEAGEKTWAMEAWNRYCTELK FLEPGEVDPKPISRVPFSLTREELLYLPKWKKHFDHDPNLDVMDLNRFNRTREVYLRMAQVMLAGGERNAFQHFFTKLEE AMLNKPTPVPEPPNPHLVRRPRWAPYEHCKSVHHSPWRLQNNGRALALGPPVTIEDEMQSRFFSNDQFLVHSVKEVLRIV LQEHKRAHPTECTRCKTEAFFYKTKDADETLKFCDDLIERLFASLGVRLSNLNTSSLLSTILEVFRVVGKESGAALLQRA NEFLERKASLGDAEGSRENLTASNYLQVLSGFADESAFVYNTKKDGTCQYKTGFDPRTTMRHLADVVQEIAGNPHVTWAA DMHLQVVETMVGCGTMKANDYFVRNVLRQFSWDSRFLEALYVEYRRQDDVDMWAELTKRALVWTARYNAPASERLRRLIE DDYDTIRVQTRTFRELAVFQFRDVEERRHSRDVVNELPNPWYDYVAHALPFPDRDAGYPDEYGDLGQWRAPGGPGSPVRG PGYYAPPMEGEHQRGYTAEWRDLRNPMRPPEFPTPWERKYRQYARGQHPSYDMVYAGPMPEIFPMRRDFRKPTRWDFHDI EKQGKYRTSGPY mS56 Trypanosoma brucei brucei Lister strain 427 0.047306836

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

1 LEVO MRKFCHFMANCWNSARSHATYGAVPLTHSQVTSVYATDGGKVDELGLLELVEERIFSWKLNKWEMRIPPNLPNDQKELIR QEQENLKQILSEWRKCFGALNADILQISSLTGVPKDVVREKNRTWLQEEVAKLRWMGEVNKAALLRDAFMRLEAFGSRDF MFMERLCCIYGLARQGTFDEAFTNYITEDPVTNDIFVDERNPFKELVAHIVRNYSQIDIIYDFLGFNYSEGYRSSLRRYM EYLQCKTAENVRASGRLVTGDKGEHNILFDYCVSRESLVSGDSCQGIIDFLYINGNDVTLIIIASDNPWLRNRQLPHRRQ MEGIARRVCFVLGIPPSEVRIRNLLLPPTYLDKGSIVRLNDIVFRLSNEQSNLLIPWLTNYNKELDPKDVDYTALAKTTN EEEWLTL mS59 Trypanosoma brucei brucei Lister strain 427 0.035395676

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

1 LEVO MRCSCAFLDKSVFAAKRRVIVPIHPTPNFPAHFIKSAFTTDPLKEKQKARFSSGGEAMREVQDIPKNLEGERSRRDLASR GDTEFQALVEFIEGASYDQLISGRRFKKVYDVLSENDDMFIWLCHTAMSVLNPGDMRSRLIYNHLRILAESVASGEMTQR TAFRFFESAVRSPAYREIAKRQLEGGAATRLAGISAAADVMRRMGLTRRPMSSYFELYQRIVERSEAMTPWGFPPLFQFE ERLSLEPRLKFFSRASQQSLERRRRGHVMTPHTTLHGRRIFWIPPTWNRAGRFLGPHVTLYPGMTPD mS62 (KRIPP14) Trypanosoma brucei brucei Lister strain 427 0.032068099999999995

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

1 LEVO MRRFCTARVSSYVKRAPLLLPRGGRRWRSGAGTTADGGGEKEYIADSFESTAGSNAYAAMELAAEARREIHELWLSAETA LEREKRVQQVAALIEKYKLDPSTPREADVSRGLGDAFDRLLLLCLPLGKTDAKGTDNLERLMHLAGRNGRELSVRTIQHL FARTDSFAEALAVFYTMRRCHVAMNMEAYYSMLYSLQRLEEEGWGQHFRNEYEENGAPSEQAMDFIVKGISNALLPENKP WLGRVMFQDRNVPDRRYDTRDFDELDTAWTQRYKSGTPAGAH Q383D1 mS63 (KRIPP16) Trypanosoma brucei brucei Lister strain 427 0.031922177999999996

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

1 LEVO MLHGTPVRRASLRYRRPYWMMFLKGVDNWKIYTVIQQPDHQRTEMLYQAWLGGLDRPYTRPKCMANQPLWLSKKRHMLRK ERLDGPETPLEKYVLEWHKKFHSFQGTERPTPDDLHTALDLVERPLDLSYALQLLGQCRNLNNIRFAKETFLVFLEACLR VGRRDCAEYALEHAEPLGFWFIDEDHRRYLQGEQTWYKLSPLDNLYYPVEENAKLNEGRKPITRLSPATESPGSGTAISD GEPSTDVEGETTVDDEIAQLEAELAALEREGGGK mS65 Trypanosoma brucei brucei Lister strain 427 0.030617381

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

1 LEVO MFSESLCILSRRFRYNTKFPALVSYNKLPWEVVNHETPQFHMHVAPHYEQLLTLAASSPVPHIIGSKHIDVPREHRLRLL PGMLYLLDGDTLPGEFTINRVLDPTALQYYGRLSSQIVTVEAVRMLVPDDLRLLCNCITFKGPLHLPVAPYASLASLRGA SQGGTTGSETGSNCFTLYHFVRPNRPPKELQLEKYYIHAPCVAPLSEFASNSDERGNWRPRLQAPKRTRRATPLPAYRPP QSYLMGLAERLAVVPGGCFGRRSLMWGHWF mS68 Trypanosoma brucei brucei Lister strain 427 0.026472807

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

1 LEVO MRRGALSLLKAGLLGHYQQEAFEARKRFEESTTYPGPIRAATPGDTRFYSGSLESILHDTDRHYWRAVTDDPRVQHLIPL RIRFKIFTWVTSGWEQRMQVVQIMAPKDSTIAQVKDLVIVENQSPYLCVSSFHLAIDGKELDPQKTLGEYGITEQSQIDA IEQNDHLLHRDDERPRDWTVDEITAEDVKRSPYKEMEMQPLQNLAPRYEARPKGYFGRTYYSGMKQSS mS73 Trypanosoma brucei brucei Lister strain 427 0.011360885

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

1 LEVO MLRRSILFRMKYADLELTTRGEFPHGMKEPAFVKKLDQNIPWYFSTYRSMYHWPITGDNWSDLNEAEKHHDLHMFYTLAW WKLGEGIFGVDEDS Q587C4 mt-SAF2 (KRIPP2) Trypanosoma brucei brucei Lister strain 427 0.116189547

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

1 LEVO MLTPTRRLPKALSPYAQALRHVALRGATAFGPGAKEMELDMLRKGTLPADYRPPVQGRWDDTIERWAYAWQFPAEEEQDD ITKSVERNASGMQALLEIGNKLLRSPPSPEPLSGKASKLYPPVGDMSSGNTALLPPNPTYDVLEQDVSELMAEDAVVVTS QPRLRAEELSAKYNVPMAYIDDSSEASNASKSLALVMEDVGLEFTEDGLTVVISALSRQGYGTIGRAIFDFASAMGLGPS AEMYRALMKYASRRGDVNESMALIEEMKGNGITPRIGNWHELMYTFYKAKDYPAVSQIVDNMKMYANIEPNEVTFVLQLK ALAKDNSQLNSLPEAIQLFDQMENVYGFIASRPHYDAMMFHLSQSPRPEMRLRCEELAHKMELMGIVWNANTYLNLIRSA QVVGDVAAVEKYLSRMREEGIPASIGHLTWAVQAHVQSMIRIDYDALKEKDESPLPTWLEHLETCFGIYELVVRRGWVMQ LPFVNALLRLTCQATILSMERTPDEAETIGRFEEQANKIWNHTFDEWQLQKDVYSYECYIALLAHQQRIDEAEKLFQEMI LKKDLSPSRRTYHCMIFMHLSSGEEGGTARALRYLEAMERAGIQVRPSLLKKIVRVNNAAGYKRDMKRRARRIMQAREEY LARKEEGVSFGEGGKEGASNQRADVDAEGNSILEPLAVSPTSTLAWWEKWKRETVSKHELFTEEGADGTPKGETFEEKNE ALRMMGITSSFQTKDLVPQPDRQKLLPLIRREEGEIAGSLWAMDGGELSYPKDGGGPQGWGVRLWRERQLVKREYQKVLD GYRPVPQLSTLGNSVRTAGDQLDIERSGAQTPGELSDYRNFPDNRFDGGQLKPESEAAPAVPFSAELVWQGEANDKLSPY KSDEEIALENDNTFFSSLSKETEGKLSIAVKAMQNKEENSVDVRGKGVTRRSKFDYLEKWRDMYRHGTLEVPEGPTLNFG RTPDDHKETMAALVRGWYQRNRKEPASEEELKRWRVDEQRSSETSASRAALKKRKQVRSRHRNK mt-SAF3 Trypanosoma brucei brucei Lister strain 427 0.106621727

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

1 LEVO MLRGWHPNSSAMQVGMRHITIGGRHSRGGFRQPLGKHPQVKQGTVEGVPRRIPGTTKVTYTNKKGRTFSFSVPVSELTHP QVTLESAAGTWREMDTSFCELGDIEDDMPSPVDECLRGGSSLDKRLIQEVRERFVSFCREYVLMDTSGMKSTILSTELNA GPDYEHYDRRLRRKRHWLAIRHRFEDVRYVIWPDVVEETARGDSAQADVSLTNPSLTAGEMLEALLWLDAASTFCVRKVH PSDLGDKSEFLPLDLQREVEVVACHARRDLDFFDPSATSLEQFTACAALCVNHRVPFSLFFPAQDVCGDASVSTGQCIVA NAPSPHTALGAVRIMALISEGSGSDIGKTIMFSDAFGAVTRFGILRGLSRVMSVEAFGCKDALENVNESELCIILHFCAE VREQNAAFFRRYEASEEDSDPQQVSFLAKYQQLSQIALARCKRLLYHPDSPRAQVMSEDGYIPLVELQRHAEGTNKAALI HYNLGIRSAQGMRRVALGAQSSARLAELVSRLEEASARVSGNTLVNDLVHHLSHKAAAGKMSLTLREVNTLLPLLSRMRR ESPNGALDARFDRVFNAIDTAIGAAMRHNCTLDELLDLAEGLAACEMVPSALKQVEMVLIRSVMMHECSPMHLRRMLQAM FTLMRTSVPQVLLQSVASRVADYIKEASHMDSSSSNGGGDEKVKNHEECEQLLELLVVLGKCGYGALPGLVTIYWEAQLI DSMQLNPRLRCSYASLLASAAFALKKHDKRAWEGLADESHRLFMEYTRCNKENDIGRFAECVTGLAVLTQIKDNTNSSDV AFLKEYLSATSLELKSCEVIRVQELTDLLGRTLEWSEALGVVAPDVVIQLEKALFVMLENVSHTAPGVGIPDELVTAACC LVDMSSASLELRKAAAGVVGGAIVHAEEALETLRSGAPTQVRPGHSFDVAALASAERENVYKNSILQYCAALQRSGMSTH VEELWS Q38E61 mt-SAF5 Trypanosoma brucei brucei Lister strain 427 0.086949414

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

1 LEVO MRHTIPFFRRSAFVPAPGSSLLNPRSQRAKVRRMVAAQKAQGENFERQALYAELGGSPSARAPRSKGERSKEATRRVGCE VAERAKHMTDAEWEGVPVDEKHAFAKYMHKVLQEHPTETTEQQRRRYFETTMADVFELDPRKTVRDEYERVKLGLPVHLK NPQYSLGVSQAVYDAADASLFDPENVHRLENAMTHVKQVFADYVHKKREGVSTEAERRMLANLTAELNLETQKHLANMFK YAEMRLRQVKLEERHHQLAEIERLRRMAQQRGGVKGRKGGSRKMSRMERLKRVINRAVGLDIAVAETVLTEMQAQEEFLQ FCEVFARLTLGSGFKHTGKDENLSAYIESLRKLYSMDAATLSTLDVVQYYSSKEGAHPVDWAKRWYERALLLPLQSTPEY QKLLQIQQRDESTVKHIKETAGTGHAFACEAEAEVARIKTQKVVNLVEKMFMDPKDKRLESLHEKRLRYLAHMQMERQIR CVRENAKLFDGVENMPEAAQCRELYEKIMEKKTAQCNMTSPPEGEGSAIQSAKTEGDHCEVGPGMFNVYDDAEASSLFEK IREITLRVIRDRRVQSAAATKARMLNRIIRSLKGGERSIAEELRALHQQRKEKMTMRILGIIENDVKTEMEWLQNMEEAE RPPLLPIPENMSYVSAADVQAWRELREDDERKAANPFERRRRTFQPELLGQAWSVPNKPLLFWGTGVSAVQQALRHVAED AERKRQGLLLAPPYPCAENPWGWRLAKDILDDNN mt-SAF6 Trypanosoma brucei brucei Lister strain 427 0.076781398

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

1 LEVO MYKKALHSFFLKVHPDFFHHNRSQQTVNESSVARLNELLSWAKAFKSGHLQPPPSSSFTLTFYRKPDDNMGNGETRREGS GSPVSSLVGRSMGDGSLSPTIIQSTFELPSNFAPSDNHRGTVERAVNKFLRDLLRRAACIDSVTESISEAEDATAARAEA KPLRRRPRGSQHRGAPTGPKSLLDEAVESMTVQWSLTPAPTLQELIEADQILFSRDLSPLQSAAALSTLQRHLGELNYSA WESMPVIVSNQFSIGDLTGTITIPWDFTPEQFHSFMAHNEKGVARCREVAIQYASTIEQLIAELCTALELDDILVSCSHQ DALRLMELLHRNRELLIQYGLSKLTLEVGNRHATRANGVVIINCSLTSEQLRPWLKAISPKLPLQQRLYELSKQMLESTL WHLKEFRTMVEPGGVDAFSNDCTYAERLQWSKELFRIGPSLAPWDWSEMTFVLSPDVDIDWANGLLALPYNFDGDALVRY VEEVQQEAKSRKREELLAASAMQREEEERRRKQQHDEELMVECQEKGERSGDDSPTVAERMRHLYRQTNPHMDEYLASSN SRVDTLPVERPLSHAVTFNSDAEAEDQLKWEGFYAEPYVDQAPTSDIDDMAHTFMLTNRWHREEAAKKMLDQLRGTYGKK SRRFEYQKMGDVLEINNAKVQPKGFPTLTRGIKPGC Q38FQ8 mt-SAF7 (KRIPP10) Trypanosoma brucei brucei Lister strain 427 0.076675156

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

1 LEVO MLSHAVPRLRLAAAAVKAAEWYAAENRRKQKGGDVIREKVDCTAPLWFDDTEQNLLAREQHVRSPAYRELHRPALTNAAM GLYGGEPGFEKAHRVWVDPDRPHIKHIYNQTALARNLRYARYGYFKRDMHLLDVDKLVRHARLLPTPGRLLTDFLYQRVP LPDKSCAALIRYQRQQIEMLEVWGRHASFQCAVEMFERMIVTNIPPVEVGVETHGEMVLCAAACGKWEEGWNVYANRARE LEKESPESFILNTFFFDALLTLCVAAGRVSEGIDTLEEVIKRNLRPRGTMLNKAMILYSILGEQMSKHEASRATSEGERS YLCEPEEVEKMGLEVWSLFDFYQLPRTTASIEAYMRMCCAFNKPTLVLKAQGFADASDIRLSIECFHWLVYAIRGVAGFG DYVMDVLSQLRPRGLTPDFVLFTLSFMYCALQRDGELALAIFDQHFVHQNMNPTPEMVLLFIQACSNCEEPTAVMLERSE TLIKRLEAVGSSVDLISPIYDQFLELCAHLGAVASGFSALKRIVGFGKPLTTRMINSLLLANSNAISSNGSLSMTEELVG FFTLLKIRPNADTEICVNLCRDAFGESPVVNDFIKVIGESLQGDSEKGEAPQYDEDIPVIQVPPHELRQLRTEWKLSPRD IVLRRFGQHTKPPGKAALDVGSMRGSVIPFGRSPGEQLV Q57UW6 mt-SAF8 Trypanosoma brucei brucei Lister strain 427 0.07672517999999999

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

1 LEVO MMHRTAARLRMPRKPTPYVRKFLEGCPLPETLVDDIAGANLKSMAPFFTTAPRYIVAAESRLSKLFFHHALYPAGGARRP CRVLIVRGGRSVREPSFTINTGGGRGEVGGGSRGYRDPARRAYFYARPSTVGPFYSGNGGVSSNVAKCHSGVGSEGAGLV KRASVDGLLSPLCGVIEAHFAVGGTCNDAVATEGDGTESLTKGGEKLCVTLAGLLSGGHGGLMMDDGNCASNVRAAKRVA RLLHDAAHHLSSFFYVHTQLPDSALFVSRPEASIASDGKGDGLLPSHLAREKDNDGRPSVEGVAVFRLAGGLEPTVHFAV GAPLSVLQRGVDGTASRGEKNSAEEGLNSAASTTVLPFGHIQCLLRVRTRGGKHCAAGKEGSEGTSNTPWCNTAGNDDIT SNFAASGPQIAGGIVEPWKLGVSLDPKVPFFMRTLTEKRPSFSCGEGYLGTCSRSGDVDGNTVNDVSSSSGGSRTRAPGE VHMNHLLVRNDCETYLLPQRELLLSFHVPEEAEAMCKEQNEERMRRQAALGYGSPSHVFAEGPRTFARVLHGMKANLAAV EEASSTFRQGAAEGISPQVNGGSTTSGSSRVYEVRALPGDVVFVPRGWKYSVERIVGTAIIDAVAASTASPREALRAVFR TAPDPPLPQDVVRCDEGHAGAGEMPGGDSSNAEIVGVEVDAFVLCYKPYPVLSNAQASTYVAANYVHSGIDDFYAKGGND VYHKYT mt-SAF9 Trypanosoma brucei brucei Lister strain 427 0.069781789

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

1 LEVO MTGPTRALFLSSGINLGRLRLAEQFSSMNGWQSKEDPAFDAYVKERRRKENYEAFDQRVERGYAAAAKLHKAEIQNAVKR RLKSSGAKFTAETLREMSSAVTERLAWLRDVWAQIDADYRSGDSARQETAAQEISAALRGEPNDYMRWVYETKRELRFAG PVGRRAIQEELQAAELPEVLDEEVNRYHDLKLNMMEIEREVKAKYGVAGQQHWAELQAAKDEEYIQKLDEAAEVYKQLLD QSARLDESRRSELQRSYVERVHQAQVRFKAAMELEGQREQLIEAHQAMKEERMRTEREKRRQLLREAAELRAQGKKSADV LTALKERQLDANAKRQAEYELKECEDILKRKSEMLDMIAHFKHDVEEREGREMLQRQKSDEERQVNVFGFYEEVGVEDGL SISSEGTTSQGGSSGLGTVSTSTSCAKSADSNSSAQPSQKLRKEELWKVINADTYEDPFRTVHQARLDAVKTYDPAYART FPLNLVLGRKYSRQGAGEMAAGNETDKQILQKGNNILYSFQWGLNNGTVHDLDADGGTDYFMDGAFHVRDKETGDIDWRY EKKRGGPVFRGPKFYRLGAQREAADPGERAMDPTPYTSTPREHKWRSS mt-SAF10 Trypanosoma brucei brucei Lister strain 427 0.069306758

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

1 LEVO MPSASSGYTFADFLRRLERSPDSHMAPLYHEHRELFVRRHDMFARVISSVTWSKGVALVAAAGYTQAVNVTIYRALLARM LLHNRHVRQCGAGSVVPWSAALRTYSEAIATHGNAVPTRMTLSALRLCTPARQWVAAISLLMLSQANDKLTLPMLIDAAG CCATPAAWEKAMALLGRFHAQSLQVLPDSIQSLRPVGTSASTVDAAAHALLPRSEGPTPEQKHILTVINKVVSAVPWQVA LSNEMCRSYLTHLVASTTLRPTEKTASLTTAVQQLPWEAFVTLMKTVTATVQEGSQGVLGSRSTPQLPPPQDGMERGDVA KSLLSNSIIREGVNLLQSEPETAIPFITTILYKLPSAEAAALFLSEATSAYRNSSSAVVAAAIRHPVVVGALLKRCADSN SWYLAASIFKSTSPTAIPCDVASDLVIQMRRANQAPLVVDVLQKYIVPSRTKLTEEAIEAALLCVLVHNRALAKASAVVA GTSPDNRTGKPNGIGVANGVHWISALSWATDLLEEGVESRILQTGTTPSVGGVNHEDPTVLLRKKTLSPRILSLLIYICV NAGSPRGGLFALGYARTVSKTELELSEEITALLYCMMYDRPREAESIIQHAVKKHGEYKGKYLGRLLVASQEAKGSALRN QT Q386U1 mt-SAF11 Trypanosoma brucei brucei Lister strain 427 0.064916957

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

2 LEVO MRRLSVSFLPFHLIVTTQRRQFGGNSKDGHKGEDKPIERVGEVPPTGPHPFNITSGAEGQISNQQRKAHDAITQLFRDDA QRKALYQKPGRTIGAQTTTAAISTPPNEDEFEGLQPISGDAEPSSITAVEAVEQELLDDAFLYFPPAQQSASGSVATTAT NELYVPGQQIIPPGLTRYRVDVQYQGNDFDGWWKSTTRQLFRREVGLDGSITRVPVAEPGTIGNAAGASRGETMGSRYHA RTVLEEALAVALDVNTVRVVAGVIPEVGVSVRRLCCHVDVPSHIELQPRTVIQRATMWMEKRQQPLAILSYRRCKNQDFH ARHSGLRRVYVYRILNRVAPPLFDAGLQWHVDRHLDVDRMKRFAKALEGTKDFGYFADPKMANALRRAAMSPGGFSTGAV TEENFQPKATGESHRVTRGKAPKVTMEKGPSNLDRAAALPTFNEYGQRVVQPGAHGKEYYRVATNLPTVRTVDRLDVVRQ DDEVLIWFVGRSFLRHQIRNMVSVLKAAGHGLWNDLELQQALQSGFEPSRHRFKRERFPTAPAYGLTLWDVEYPDQHRDD YVQFVDSGPYEQVNIARDI mt-SAF13 Trypanosoma brucei brucei Lister strain 427 0.063690703

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

1 LEVO MKRYRSSVVTRLVRAITLRPDATVDPERYPLGYVPLDGSESVDSVWSLVKSGAFVAPLSKIETIHRAHVGIRYLTQSEYP ALSSIDVVGLQTRLKELCSRLLIRRDFWVLDDYNDPELNSSFGIQNMYFDNFKWSQVLWRRFQQYVEEYFPVAEHTHLTY DEYLQLLRSFSHFEQGAKLLPLLPKRYRIHPPFGVPALSRIDMEPLLLYSQWLKNFRGPLKLDAALVIRSGCGAAVFATK LNGVPIVRGVDPNPRAVMSCRKDAQRMGRRFDSISFRVGEMFPDKDDGNGVPNSRKYDIIVFYPDQGCYNLFFTNAIGEY APVLTGFAGTLEHFFEEAGDYLSDSGVIVLCCTNVYSILKPTEPHPIEYEIKVNRRWVLLDYYDMPVRGKGTLSHTPTDH HYRIPMEMRKCMRSELWVLHKMTSIAHFAHIHNIPGAQPPSCVVSHWRNKAIGKLRRAVLKGQVESSGGDWDDYKKRLVH LLQEQSENDEDDKAQAIRMAMDPNYPKELADRARAAIEKNMDTDKAFHNNVAKAFGDISPRERFDAYLSCYRL mt-SAF18 Trypanosoma brucei brucei Lister strain 427 0.042508039

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

1 LEVO MLCHNRLLLVNKQTQKYRTKLRYRFRQPSVVPLRQTLQQRHNTILEVLRRRRINSGDQSPYRYVEERLYSKPSRLDREGV KVNKTYALQGLGDLEPLRYGANFGISEKDALKYETVAEKAKYMEPPIPYSSLAARKLAAGALWPAAPDPEGMISKEVRLL RHESSMSPSARAFSERVAYHLRRSLKACPGHIAEHIDFTQLIIQEVLGSRRSKEIYIVWFTVDPGARFELEPRLHQLNHW VQQLIIKRVKRRPHIPRVTWIYDGGRLERELPRDVKQELQSFVADAATTLESRVKYLKELDTMNQRMKDIPWFMPYLWSK EEKAARQKSMLADLEEVERRKNEHSSGRSAPPRTSPPPQFVR mt-SAF21 Trypanosoma brucei brucei Lister strain 427 0.039610793

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

2 LEVO MSAIKRSLNVGVVGMGNMGVPIARNLGFKARSAMYLQIHSRALSKAKRVCDDLSVDGATCAMRIHDRYSTMTKWCDVIVL ALADVKASRHALLEDNESLIMNARKGQIIVDHTTVDAETSRECAHEAARRGAYFLDAPMSGSPRACFNGQLLLMVGGDAE TFQKMLPIFHMYADNVFHMGESGSGTAAKMISQALVASHNAAAAEALSMAHALGIEDQSKLVQVLDASWGSSTMLRRNAP LLQDLIRNPDKTPPTSAVSVDRLLSDLAHLDASLPKRGGEDEPFPVFDAALRSLAAASDAGMGDRDLASVVHYIEAGEAE LRNRTHVPLGGEHLTGRTAATAANSSVNETPSTVNGSSEVPNEFGVEDFY mt-SAF22 (KRIPP17) Trypanosoma brucei brucei Lister strain 427 0.039132621

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

1 LEVO MTDPVRRDPTEFLRVLRRMSRTTSWQKTMLFASKGRMVGYRLTREHYNTVLFSQSLWGRALEIVRVVRAMQEDKVQPNGA TYYYIVNGMGNADHGWNYDFRINRRLEKIQHWRVALEALEACEANGFDSTDTMHNSALITLVIPGFNRWQQASLLLQRML REDRRMHPTMVKFYHDCLVRNNRPREASSLMRLAAERGVHGYEDKWEADVYKGRPLDSEVMNESEGNGLRRQASSLAFAS LMLRGDQRPLPENLQALLEEETTRNIEAERSVPVPFSAGLHATEINSVFRPRVYRQLWYKWQHIANRYRPTAALKRRQLA PRDSPTGIPGFYRI Q389F9 mt-SAF23 Trypanosoma brucei brucei Lister strain 427 0.03824016399999999

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

1 LEVO MVAKLQHNSAPTTLNFYEKSFQQLSDVQQRQTGLLIGAAVGDAAARALDGYTAEEVAAVAAESGSLQDEDEDPVVFASVT PREHKSGLLRHHSYTFYLFSQLLRVMATSRGDFPVQYVKNEWVATARAHPDCFVREHASLLHVLCITMQLPVIYPWADDS TLREYASGFLEFLTETPAEQAVASREDVYAYTNSVLGVALRCLQSNPDPYRNAAFMAAPGTAHVFPDDLALYCPPALVGS SHSRTEELSETDSETVPLFPARLLESDVRVVRECLVVARGAASFAEGIKAAIHLGGPVCQRSLIVGALLGARMGVRRIPI SWLSATYDHVPLVTLALQVAQWSWNPPHH mt-SAF24 Trypanosoma brucei brucei Lister strain 427 0.034648046999999994

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

5 LEVO MRFINQAASDRAVINAGGRRFETLFSTLHRYPDTPFAQLFPLPGRGARQHRGREFFLDVTPHVFEYILGFLRTNQLNLPA ENLQIRAEVVYSMNQWGLLEHAFPPEVIEDGEGCSTGGAVVKLPDVCVVQVCDHMQHDQGVKRHALTITYGADGFQLRSL IRRVRRDLERQLSSTYWQCYQTNERAAFFVTTKVANGTADLLTTSVTQQLVEHTESMGYSLASSYVTLSPDVVHTSVRML IHNFTFRRSRRVEVEPGDGIALGEGSETIEAEPNIPTMHVGPRREPLNAAESIPPRNERAVNIWTVD Q387P8 mt-SAF26 Trypanosoma brucei brucei Lister strain 427 0.030538557

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

1 LEVO MSTSSRGILIAGLTNRARTQMAEGILRRLTAGTIFIKSGGVHHESTIHPLAVKVMKDIGIDISKQSVTSLEAARRQQNTY DVYISIDCSYERRTLDKSQPPRAEVRRRESFTVEYGDDGSGPRGGDDPVRYDPLLVPRTPSHWSVGVDATDVRRRWQIWS PRDPSIFHETSTRKFQDHLYEGEPLFMQLRQCPWRTQAKVSERWEMDEVAIRYPVERHSAHELRFVQAREQLLQRSFDLL TKLEKHYGERLLLDRALLEEFIS Q38FI3 mt-SAF27 Trypanosoma brucei brucei Lister strain 427 0.026936748

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

1 LEVO MHPRLSGQGVFPRYGGGWMHQFGHVYALQQELLNAEANNWFRAMELWHTARHEGVAMNVSHYTNILRQCVPPTAWEASLM VLKQMRRENIRPDVVGVGCALAACADANRSEEVEKVFSCFSGKLKLDSICYLALIKAKMSRGGYAEALAVGREQDADGVP FLPHTYTHLLEAAEVADDGEMALELARRMSSEQWPVSDRGREALKKLSTRHHWEEVAEYKQFVAVEDHKLSLPPTLPRG Q57YK5 mt-SAF28 Trypanosoma brucei brucei Lister strain 427 0.021468706999999997

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

1 LEVO MWRLSRSLRSNSLHNPGPFLDGALQLIKLHLAHKNAAADKNTKACSDIEGEFLRELEAFRACFTMSSSLKVAKLYTKKLH GALSYFQLYDDPLMRQLDMIIGKQTMQPSAGRQHGVFKAPVAARLDPFFLDEREETVLPSELPNPPKPDPSTPLRERALK VPAQHRGHWVLRDPDIAITREERRTDPW mt-SAF29 Trypanosoma brucei brucei Lister strain 427 0.020048514

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

1 LEVO MRRKTTLNIGQVICFSSWNDGSEGYEWKSRALSEKRSLALEFLGNVNKRVSIHDAIRLKADINKKAISNVSCPSFFSGIE GADEDEDQSDMSLCSLLGVLEGEIETDCITHLSPSDASLLKEEFLCDYDPSDTKRMAKWVNLRSETSDYQSYGAIPEGER SLWSAWYLRNIKAGKKPI mt-SAF30 Trypanosoma brucei brucei Lister strain 427 0.019659756

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

1 LEVO MPPNSATRWLPFVSSDLKDYLNRYWAVMFTVGARPIETGHIRHYVSWYCTRMKVVLLDHHVYVEPLRQQLQEASRTPELP LLFVNKKLVGTLRDVELLEREKKLKDVLHFGFEWRVGGSVAATNGQKSLMGALPAPYGDAEFFRGRYRGPPVARPVVSLP TLHPFALRSEE Q57VU7 mt-SAF31 Trypanosoma brucei brucei Lister strain 427 0.017673535

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

1 LEVO MNCSSTLACHAVVSAPSTASLITSCWTPQQHCYRQLMKSLRAAYFHDRSKLFWSRHRVLVEFYKYSEEANEEAVKQLVAI GLEVAAFIDHHMRTDVERIVKHNETMMALPVAQAKKFRSDYLLAEKQHDSWCKQKIKNIMKRRPPPPYPFF Q581U4 mt-SAF32 Trypanosoma brucei brucei Lister strain 427 0.016550807

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

1 LEVO MQRSQLARKFATQVGAYSLLRGRCHAVSTWKVMATQAVTIPMYLPVRFHSEGHAAGEEAGRTGQYLLNKDDVLTRVLEVV KNFEKVDASKVTPQSHFVNDLGLNSLDVVEVVFAIEQEFILDIPDHDAEKIQSITDAVEYISQNPMAK Q57WW9 mt-SAF33 Trypanosoma brucei brucei Lister strain 427 0.016291121

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

1 LEVO MRHFGPSIAHFPLSANQLRFKASHIRIANRKRVEMFVAKRFHLPTRLATAAPDIAAEWHDELNPMHMYPAIIGIGHVQPV WWKCAICSHSYQMSVEKRVVRGGGCPQCVVNGKRAVADGALEGEMDSQLRPKRPVMFNMRTKY Q581T4 UNK-A Trypanosoma brucei brucei Lister strain 427 0.001805216 1 LEVO (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK) UNK-B Trypanosoma brucei brucei Lister strain 427 0.002315846 1 LEVO (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) UNK-C Trypanosoma brucei brucei Lister strain 427 0.000869063 1 LEVO (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) UNK-D, UNK-M, UNK-Q Trypanosoma brucei brucei Lister strain 427 0.000783958 3 LEVO (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) UNK-E, UNK-P Trypanosoma brucei brucei Lister strain 427 0.003847734 2 LEVO (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) UNK-F Trypanosoma brucei brucei Lister strain 427 0.0009541679999999999 1 LEVO (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) UNK-G Trypanosoma brucei brucei Lister strain 427 0.0014647969999999999 1 LEVO (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK) UNK-H Trypanosoma brucei brucei Lister strain 427 0.00044353899999999996 1 LEVO (UNK)(UNK)(UNK)(UNK)(UNK) UNK-I, UNK-M Trypanosoma brucei brucei Lister strain 427 0.0006988540000000001 2 LEVO (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) UNK-J Trypanosoma brucei brucei Lister strain 427 0.0013796919999999999 1 LEVO (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) UNK-L Trypanosoma brucei brucei Lister strain 427 0.001890321 1 LEVO (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK) UNK-O Trypanosoma brucei brucei Lister strain 427 0.0025711609999999998 1 LEVO (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) UNK-U Trypanosoma brucei brucei Lister strain 427 0.002060531 1 LEVO (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) UNK-I Trypanosoma brucei brucei Lister strain 427 0.039847105 1 LEVO (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK) 9S rRNA Trypanosoma brucei brucei Lister strain 427 0.151505578

9S ribosomal RNA from Trypanosoma brucei. GenBank: X02547.1 and S66467.1 Sequence of 3'-major domain omitted.

1 UAAAUUAUGGUCAAUUGUUAGUAUUCAUAUUAAUUUUUUUAAAUGUUUUAUCAUUUUAUAAAGGUUUAUUUUUGAAAGAU UUUUUGUAUAAAAUUUUAGGAAUAGUUAAUAAUAAUUUAUAAUUUUGAUUAGAUUGUUUUGUUAAUGCUAUUAGAUGGGU GUGGAAAAAUAAAAAAAAUAAUUAAUAUAUAUCAAUAAUAAAUUAAAUUAAUCUAUUAGUCAGAAAUGGAUGCCAGCCGU UGCGGUAAUUUCUAUGCUUUUAAAUAUUAUACAAUUAUCAUAUUAAAUUGUUAAGUGCUGAUUUAACCAAUAAAAAUAUA AAUAAUUUUUAUUUGUUUUUAAACACCAUUAGGUAUAUGCAAAUAUAAAAUUAUAGUAAUUAUAGAAAUUAAAAAGGUAU UGUUGCCCACCAAUUUUUAUAAUAAAAAUAACGUGCAGUAAUUAAUAUAUUUAUAAAAAUAUAUUUUUUUUUU(UBD) mt-SAF1 (RSM22) Trypanosoma brucei brucei Lister strain 427 0.119799398

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

1 LEVO MFFRFHSTTLQTCLTSGVARSSVAVAVPLRAGCTRREMSSGGDGVLEGAMHKPGESGLQAGSSTTIAGKETWSQFSTKMR YGRRRIRVIDVAAKMSYEYQMLRKMCKRRPAMRQWAVRDDFCDMNPGVVIMSPSMQAAFMKVFRMKEKGLIRQCLRDIVP VIEYRNREEPARLPTNPADMIPEGEPDTLNQKKRELFERREKGENFADLRLHDKRSQAKLRFRIRQRLLKFQRQLAVANA IASRSVLYSTNDAIGYFLFRGAAMYAGMHRVFFELSKQLPHFVPKTMLDFGAGTGTAILVAKEVYDPGSLAYPLYRSLRQ TMQGNDSSRTHQLSELRYDLKRLQRNNEEKKKVRFMAVAALLERGEVDPADLPEDLKREIAEVATAAATAKKDRLVREAH ARYRDVVDGTEWESGDPLGEVRASTEDPEDVIDGEQGDGGDDGEAAKGRPKTWWEKLIDVENETARTRAARRLRPLQEVT AVEPSPGMMEIGTMVLHDDVPNVTWKRYLLPEDEAIQHDLVVAAYSLSEIATSENRRRIVQQLWKMTKGVLVFVEFANLN NFNILMEARDWILEEKDVGLWDWQPTIVAPCPHEHRCPLRHCKTGVKRKRMRICSTEAHYRSTFVEVWARHMPLKVGIEP ISYLILARNELVPERAERRREQLKKAEEMKRRERDVKQQQLHEASLAVKDVVFERLSDEALHRVQSSVPQPLTDIDEVRE ASTSATSTSLLKDLKDGATSTGEIGHMPTDVPRLVKTGNTRHNRLIFPLQFPPATHKFNRAFVDAGYQRQRAITPAEMLV VRQEVEQLQQRVMRAAPKYLRVVRDPRCHGKVQADFCTPEGDLVSGRVYRRFYGDRNRVSAHSTMRWQHIGGWKLLKRIR RGSLFPHNVPLYAVTKHAQIDFPNTLLDTKHSTVEQTAMQYNDPMSLVEMPDDGLTREELKQKRRLQRDVELQKKVEEKL EDIFGVNAKDWKTDDLGGGRLDARREISEQQWADAVRRAKIRTVQHTKNALPFAAKKRAAQRALQVRRRNVRLEMSGNRR R Q385R2 mt-SAF14 Trypanosoma brucei brucei Lister strain 427 0.05332082

Protein of Trypanosoma brucei brucei Lister strain 427; sequence accessible on TriTrypDB; where necessary, the reference strain TREU927 was used to complete the sequence

1 LEVO MKRIVVPHRWSEMNRVEHPPLMMKQLFQGVCGGLRWLETKSLAQYLAVRAIEEGYPSTPGVRKALHVKRAPLQKRRVVQR STKSATAACSLPTTAAPAQLPLTSSGDALTVTGGLSLQVTKQKRLVSYDVLDCTLGSGYHAGAVLENGGPYTRVVALDCD HDAMHAARDLVEEFGGDRFRFYCCKMSEAKAMFGERSFDAIMIDGGVSDTQLEDPERGFLLDDEGGHRLDMRFGPQMGVG ALEYLNTVSQHTLVSSLLAYGLLEYGQAMKMSRAITRRKPFVDSREVLTCIEQAGDELPEGGWRSQGSRRKSPMSWKFLT SLRCIINNEMYELRQGIENALLMLRDDGRLVVFSRLPWEERLVRGTVDDHPHALLSYVEDISIDDVQIYGFTRHAKMWVI TRAASSAYALKNTTTLTEEKFRESSVRWLTGMYAGQTHGFPANNFTFENFERKEWVTLRRNGKPPPVDVGLDDK Q57W60 MAGNESIUM ION 2.4305e-05 4 MG PHOSPHATE ION 9.4971e-05 1 PO4 S-(2-{[N-(2-HYDROXY-4-{[HYDROXY(OXIDO)PHOSPHINO]OXY}-3,3-DIMETHYLBUTANOYL)-BETA-ALANYL]AMINO}ETHYL) DECANETHIOATE 0.000496598 1 PM8 ZINC ION 6.5409e-05 1 ZN singleParticle particle 7.4 Quantifoil R2/2 COPPER 300 CARBON CONTINUOUS GLOW DISCHARGE ETHANE-PROPANE 90 278 FEI VITROBOT MARK IV

Body domain of the mitochondrial ribosomal small subunit assemblosome of Trypanosoma brucei brucei Lister strain 427

FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 59000.0 100719.0 FEI TITAN KRIOS AUTOGRID HOLDER NITROGEN FEI FALCON III (4k x 4k) INTEGRATING 40.0 1

Startup model calculated from a small negative stain data set using EMD-0230 (T.brucei mitoribosomal small subunit) as an initial reference for classification of mitochondrial small subunit-like classes

C1 FOURIER SPACE 3.1 FSC 0.143 CUT-OFF RELION 161661 MAXIMUM LIKELIHOOD RELION MAXIMUM LIKELIHOOD RELION OTHER

Starting models of ribosomal proteins of the T. brucei mitochondrial ribosomal small subunit were taken from PDB 6HIW. Mitchondrial ribosomal small subunit assembly factors were built de novo.