2019-06-19 REL RCSB RCSB RCSB 2019-03-09 2019-04-24 2019-04-24 2019-06-19 National Institutes of Health/National Human Genome Research Institute 5R01GM115882-03 United States Other private David and Lucile Packard Foundation United States Structural basis of Dot1L stimulation by histone H2B lysine 120 ubiquitination. 3.5A reconstruction of Dot1L on H2BK120Ub nucleosome Valencia-Sanchez MI De Ioannes P Wang M Vasilyev N Chen R Nudler E Armache J-P Armache K-J Valencia-Sanchez MI De Ioannes P Wang M Vasilyev N Chen R Nudler E Armache JP Armache KJ Structural Basis of Dot1L Stimulation by Histone H2B Lysine 120 Ubiquitination. Mol.Cell US 74 1010 1019.e6 2019 30981630 doi:10.1016/j.molcel.2019.03.029 1097-2765 2168 MOCEFL EMD-0652 associated EM volume 6o96 FULLOVERLAP Cryo-EM structure of human Dot1L bound to H2BK120Ub nucleosome at 3.5A resolution Cryo-EM structure of human Dot1L bound to H2BK120Ub nucleosome at 3.5A resolution 0 Homo sapiens Escherichia coli BL21(DE3) singleParticle particle 7.5 CARBON HOLEY
unspecified
 ETHANE 100 295.15 FEI VITROBOT MARK I
3 ul of Dot1L-nucleosome complexes were applied to a glow discharged Quantifoil holey carbon grid (1.2 um hole size, 200 mesh), blotted in a Vitrobot Mark III (FEI Company) using 1.5 seconds blotting at 100% humidity, and then plunge-frozen in liquid ethane cooled by liquid nitrogen..
This sample was monodisperse
 FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 GATAN K2 SUMMIT (4k x 4k) SUPER-RESOLUTION 5.0 41.0 1
Frames were motion corrected using MotionCor2 with dose-weighting
1466930 Gctf Generated using cryosparc ab initio run 3.5 FSC 0.143 CUT-OFF 211279 PROJECTION MATCHING PROJECTION MATCHING emd_0652.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 320 320 320 0 0 0 320 320 320 331.19998 331.19998 331.19998 90.0 90.0 90.0 X Y Z -8.897007 13.8018 -0.007490441 0.34495002 1.035 1.035 1.035 1.2 AUTHOR Final map from cisTEM, filtered at 3.5A, unsharpened FLEXIBLE FIT REAL emd_0652_additional.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 320 320 320 0 0 0 320 320 320 331.19998 331.19998 331.19998 90.0 90.0 90.0 X Y Z -25.982019999999999 37.144196000000001 -0.012316893 0.9324388 1.035 1.035 1.035 AUTHOR Final map from cisTEM, filtered at 3.3A, -20 bfactor emd_0652_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 320 320 320 0 0 0 320 320 320 331.19998 331.19998 331.19998 90.0 90.0 90.0 X Y Z -8.097882999999999 12.295264 -0.10351807 0.33534473 1.035 1.035 1.035 AUTHOR Half-map 1 emd_0652_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 320 320 320 0 0 0 320 320 320 331.19998 331.19998 331.19998 90.0 90.0 90.0 X Y Z -8.738583999999999 12.537896999999999 -0.10302975 0.33515862 1.035 1.035 1.035 AUTHOR Half-map 1