2024-03-20 REL RCSB RCSB RCSB 2019-02-22 2019-03-20 2019-04-24 2024-03-20 National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) R01GM098672 United States National Institutes of Health/National Center for Research Resources (NIH/NCRR) S10OD020054 United States National Institutes of Health/National Center for Research Resources (NIH/NCRR) S10OD021741 United States National Institutes of Health/National Institute of Neurological Disorders and Stroke (NIH/NINDS) R35NS105038 United States Netherlands Organisation for Scientific Research (NWO) 451001004 Netherlands European Union (EU) 748058 European Union Human Frontier Science Program (HFSP) France Howard Hughes Medical Institute (HHMI) United States Cryo-EM structure of TRPV5 with calmodulin bound Dang S van Goor MK TRP channel, MEMBRANE PROTEIN Dang S van Goor MK Asarnow D Wang Y Julius D Cheng Y van der Wijst J Structural insight into TRPV5 channel function and modulation. Proc.Natl.Acad.Sci.USA US 116 8869 8878 2019 30975749 doi:10.1073/pnas.1820323116 1091-6490 0040 PNASA6 EMD-0593 other EM volume
TRPV5 with C-terminal deletion
 EMD-0594 other EM volume
Full length TRPV5
 EMD-0605 other EM volume
TRPV5 with W583A mutant
 6o20 FULLOVERLAP Complex of TRPV5 with calmodulin bound Complex of TRPV5 with calmodulin bound 0 1 2 Oryctolagus cuniculus Transient receptor potential cation channel subfamily V member 5 Oryctolagus cuniculus 0.082899656 5 Homo sapiens LEVO MGACPPKAKGPWAQLQKLLISWPVGEQDWEQYRDRVNMLQQERIRDSPLLQAAKENDLRLLKILLLNQSCDFQQRGAVGE TALHVAALYDNLEAATLLMEAAPELAKEPALCEPFVGQTALHIAVMNQNLNLVRALLARGASVSARATGAAFRRSPHNLI YYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDEHSDHLQSLELVPNHQG LTPFKLAGVEGNTVMFQHLMQKRKHVQWTCGPLTSTLYDLTEIDSWGEELSFLELVVSSKKREARQILEQTPVKELVSFK WKKYGRPYFCVLASLYILYMICFTTCCIYRPLKLRDDNRTDPRDITILQQKLLQEAYVTHQDNIRLVGELVTVTGAVIIL LLEIPDIFRVGASRYFGQTILGGPFHVIIITYASLVLLTMVMRLTNMNGEVVPLSFALVLGWCSVMYFARGFQMLGPFTI MIQKMIFGDLMRFCWLMAVVILGFASAFHITFQTEDPNNLGEFSDYPTALFSTFELFLTIIDGPANYSVDLPFMYCITYA AFAIIATLLMLNLFIAMMGDTHWRVAQERDELWRAQVVATTVMLERKMPRFLWPRSGICGYEYGLGDRWFLRVENHHDQN PLRVLRYVEAFKCSDKEDGQEQLSEKRPSTVESGMLSRASVAFQTPSLSRTTSQSSNSHRGWEILRRNTLGHLNLGLDLG EGDGEEVYHF Q9XSM3 Calmodulin Bos taurus 0.019023912 1 Escherichia coli-Pichia pastoris shuttle vector pPpARG4 LEVO MGSSHHHHHHSSGLVPRGSHMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE EFVQMMTAK P62157 CALCIUM ION 4.0078e-05 4 CA singleParticle particle 1 8.0 150.0 NaCl sodium chloride 2.0 TCEP tris(2-carboxyethyl)phosphine 50.0 HEPES 4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid 5.0 CaCl2 calcium chloride 0.02 LMNG 2,2-didecylpropane-1,3-bis-beta-D-maltopyranoside Quantifoil R1.2/1.3 COPPER 400 CARBON HOLEY GLOW DISCHARGE AIR 101.325 ETHANE 100 293 FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 FEI TITAN KRIOS AUTOGRID HOLDER NITROGEN GATAN K2 SUMMIT (4k x 4k) SUPER-RESOLUTION 1 1135 10.0 63.0 1 482348
automated picked
 EMD-0593 C1 3.3 FSC 0.143 CUT-OFF cisTEM 34604 RANDOM ASSIGNMENT cryoSPARC MAXIMUM LIKELIHOOD cryoSPARC 3 cisTEM emd_0607.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 256 256 256 0 0 0 256 256 256 271.104 271.104 271.104 90.0 90.0 90.0 X Y Z -0.38624346 0.61685777 0.001679637 0.033558242 1.059 1.059 1.059 0.15 AUTHOR sharpened map with 1 CaM bound 6O1N PDB experimental model AB INITIO MODEL emd_0607_additional_4.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 256 256 256 0 0 0 256 256 256 271.104 271.104 271.104 90.0 90.0 90.0 X Y Z -6.8860197 21.224052 0.0024888625 0.42671287 1.059 1.059 1.059 AUTHOR sharpened map with 2 CaM bound emd_0607_additional_3.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 256 256 256 0 0 0 256 256 256 271.104 271.104 271.104 90.0 90.0 90.0 X Y Z -1.5189385 2.4672258 0.0073946198 0.07602519 1.059 1.059 1.059 AUTHOR sharpened map without symmetry applied emd_0607_additional_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 256 256 256 0 0 0 256 256 256 271.104 271.104 271.104 90.0 90.0 90.0 X Y Z -1.4986888 2.806715 0.0074102096 0.08176435 1.059 1.059 1.059 AUTHOR sharpened map with C2 symmetry applied emd_0607_additional_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 256 256 256 0 0 0 256 256 256 271.104 271.104 271.104 90.0 90.0 90.0 X Y Z -2.3354225 3.980249 0.0074049593 0.11014665 1.059 1.059 1.059 AUTHOR sharpened map with C4 symmetry applied